RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 THRAP3Q9Y2W1 955 aaKnown RBP19.18■□□□□ 0.66
CAPNS1-213ENST00000592354 SBF2Q86WG5 1849 aa19.17■□□□□ 0.66
CAPNS1-213ENST00000592354 EZH2Q15910 746 aaKnown RBP19.17■□□□□ 0.66
CAPNS1-213ENST00000592354 AXIN2Q9Y2T1 843 aa19.17■□□□□ 0.66
CAPNS1-213ENST00000592354 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
CAPNS1-213ENST00000592354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.16■□□□□ 0.66
CAPNS1-213ENST00000592354 KCNH5Q8NCM2 988 aa19.15■□□□□ 0.66
CAPNS1-213ENST00000592354 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
CAPNS1-213ENST00000592354 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
CAPNS1-213ENST00000592354 ABCC6O95255 1503 aa19.15■□□□□ 0.66
CAPNS1-213ENST00000592354 APBA3O96018 575 aa19.14■□□□□ 0.65
CAPNS1-213ENST00000592354 ARHGEF25Q86VW2 580 aa19.14■□□□□ 0.65
CAPNS1-213ENST00000592354 OVOS2A0A0G2JMS6 1433 aa19.14■□□□□ 0.65
CAPNS1-213ENST00000592354 OVOS2A0A0J9YW53 1432 aa19.14■□□□□ 0.65
CAPNS1-213ENST00000592354 OVOS2Q6IE36 1432 aa19.14■□□□□ 0.65
CAPNS1-213ENST00000592354 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
CAPNS1-213ENST00000592354 R3HDM1Q15032 1099 aaKnown RBP19.13■□□□□ 0.65
CAPNS1-213ENST00000592354 A0A1W2PP64 1363 aa19.12■□□□□ 0.65
CAPNS1-213ENST00000592354 NME9Q86XW9 330 aa19.12■□□□□ 0.65
CAPNS1-213ENST00000592354 CAMKK2Q96RR4 588 aa19.12■□□□□ 0.65
CAPNS1-213ENST00000592354 RGPD3A6NKT7 1758 aaPredicted RBP19.11■□□□□ 0.65
CAPNS1-213ENST00000592354 RGPD4Q7Z3J3 1758 aa19.11■□□□□ 0.65
CAPNS1-213ENST00000592354 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
CAPNS1-213ENST00000592354 SLC12A5Q9H2X9 1139 aa19.11■□□□□ 0.65
CAPNS1-213ENST00000592354 EDC4Q6P2E9 1401 aaKnown RBP19.1■□□□□ 0.65
CAPNS1-213ENST00000592354 PARD3Q8TEW0 1356 aa19.1■□□□□ 0.65
CAPNS1-213ENST00000592354 USP31Q70CQ4 1352 aa19.09■□□□□ 0.65
CAPNS1-213ENST00000592354 DDB1Q16531 1140 aa19.09■□□□□ 0.65
CAPNS1-213ENST00000592354 HDGFL2Q7Z4V5 671 aaPredicted RBP19.09■□□□□ 0.65
CAPNS1-213ENST00000592354 ST20-MTHFSA0A0A6YYL1 179 aa19.06■□□□□ 0.64
CAPNS1-213ENST00000592354 TESK2Q96S53 571 aa19.06■□□□□ 0.64
CAPNS1-213ENST00000592354 CARD10Q9BWT7 1032 aa19.05■□□□□ 0.64
CAPNS1-213ENST00000592354 TERF2IPQ9NYB0 399 aa19.05■□□□□ 0.64
CAPNS1-213ENST00000592354 TNS2Q63HR2 1409 aa19.05■□□□□ 0.64
CAPNS1-213ENST00000592354 FAM208AQ9UK61 1670 aaKnown RBP19.05■□□□□ 0.64
CAPNS1-213ENST00000592354 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
CAPNS1-213ENST00000592354 ERBB3P21860 1342 aa19.03■□□□□ 0.64
CAPNS1-213ENST00000592354 PTF1AQ7RTS3 328 aa19.03■□□□□ 0.64
CAPNS1-213ENST00000592354 MARCH10Q8NA82 808 aaPredicted RBP19.03■□□□□ 0.64
CAPNS1-213ENST00000592354 NHSQ6T4R5 1651 aa19.03■□□□□ 0.64
CAPNS1-213ENST00000592354 USP47Q96K76 1375 aa19.03■□□□□ 0.64
CAPNS1-213ENST00000592354 CDCA7Q9BWT1 371 aaPredicted RBP19.02■□□□□ 0.64
CAPNS1-213ENST00000592354 NINLQ9Y2I6 1382 aa19.02■□□□□ 0.64
CAPNS1-213ENST00000592354 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
CAPNS1-213ENST00000592354 KIF20BQ96Q89 1820 aa19.01■□□□□ 0.63
CAPNS1-213ENST00000592354 MYOM1P52179 1685 aa19.01■□□□□ 0.63
CAPNS1-213ENST00000592354 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
CAPNS1-213ENST00000592354 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
CAPNS1-213ENST00000592354 RGPD2P0DJD1 1756 aa19■□□□□ 0.63
CAPNS1-213ENST00000592354 BCL9O00512 1426 aa18.99■□□□□ 0.63
CAPNS1-213ENST00000592354 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
CAPNS1-213ENST00000592354 ANKRD24Q8TF21 1146 aa18.98■□□□□ 0.63
CAPNS1-213ENST00000592354 ANKRD36BQ8N2N9 1353 aa18.97■□□□□ 0.63
CAPNS1-213ENST00000592354 CASZ1Q86V15 1759 aa18.97■□□□□ 0.63
CAPNS1-213ENST00000592354 BCL11BQ9C0K0 894 aaPredicted RBP18.97■□□□□ 0.63
CAPNS1-213ENST00000592354 BTAF1O14981 1849 aa18.96■□□□□ 0.63
CAPNS1-213ENST00000592354 EXOC5O00471 708 aa18.96■□□□□ 0.63
CAPNS1-213ENST00000592354 LTV1Q96GA3 475 aaPredicted RBP18.94■□□□□ 0.62
CAPNS1-213ENST00000592354 COG3Q96JB2 828 aa18.94■□□□□ 0.62
CAPNS1-213ENST00000592354 ANO8Q9HCE9 1232 aaPredicted RBP18.94■□□□□ 0.62
CAPNS1-213ENST00000592354 SHANK3Q9BYB0 1731 aa18.94■□□□□ 0.62
CAPNS1-213ENST00000592354 PLSCR1O15162 318 aa18.93■□□□□ 0.62
CAPNS1-213ENST00000592354 IL2RBP14784 551 aa18.93■□□□□ 0.62
CAPNS1-213ENST00000592354 TMF1P82094 1093 aa18.93■□□□□ 0.62
CAPNS1-213ENST00000592354 DOT1LQ8TEK3 1739 aa18.93■□□□□ 0.62
CAPNS1-213ENST00000592354 KCNQ2O43526 872 aa18.92■□□□□ 0.62
CAPNS1-213ENST00000592354 FBLN1P23142 703 aa18.92■□□□□ 0.62
CAPNS1-213ENST00000592354 ACSBG1Q96GR2 724 aa18.92■□□□□ 0.62
CAPNS1-213ENST00000592354 MAP3K19Q56UN5 1328 aa18.92■□□□□ 0.62
CAPNS1-213ENST00000592354 IP6K1Q92551 441 aa18.91■□□□□ 0.62
CAPNS1-213ENST00000592354 SLC24A1O60721 1099 aa18.9■□□□□ 0.62
CAPNS1-213ENST00000592354 PAPPAQ13219 1627 aa18.89■□□□□ 0.62
CAPNS1-213ENST00000592354 HOXC9P31274 260 aa18.89■□□□□ 0.61
CAPNS1-213ENST00000592354 PROM2Q8N271 834 aa18.89■□□□□ 0.61
CAPNS1-213ENST00000592354 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
CAPNS1-213ENST00000592354 AMPHP49418 695 aa18.88■□□□□ 0.61
CAPNS1-213ENST00000592354 TXNRD1Q16881 649 aa18.88■□□□□ 0.61
CAPNS1-213ENST00000592354 GGNBP2Q9H3C7 697 aa18.88■□□□□ 0.61
CAPNS1-213ENST00000592354 RTL1A6NKG5 1358 aa18.87■□□□□ 0.61
CAPNS1-213ENST00000592354 MEGF6O75095 1541 aa18.87■□□□□ 0.61
CAPNS1-213ENST00000592354 RRS1Q15050 365 aaKnown RBP18.87■□□□□ 0.61
CAPNS1-213ENST00000592354 PDGFDQ9GZP0 370 aaPredicted RBP18.86■□□□□ 0.61
CAPNS1-213ENST00000592354 KAT6BQ8WYB5 2073 aa18.85■□□□□ 0.61
CAPNS1-213ENST00000592354 FYB1O15117 783 aa18.85■□□□□ 0.61
CAPNS1-213ENST00000592354 SPON1Q9HCB6 807 aa18.85■□□□□ 0.61
CAPNS1-213ENST00000592354 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-213ENST00000592354 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
CAPNS1-213ENST00000592354 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.61
CAPNS1-213ENST00000592354 ANKRD26Q9UPS8 1709 aa18.83■□□□□ 0.61
CAPNS1-213ENST00000592354 CDCA8Q53HL2 280 aa18.83■□□□□ 0.6
CAPNS1-213ENST00000592354 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
CAPNS1-213ENST00000592354 STK32BQ9NY57 414 aa18.82■□□□□ 0.6
CAPNS1-213ENST00000592354 USHBP1Q8N6Y0 703 aa18.81■□□□□ 0.6
CAPNS1-213ENST00000592354 TUBGCP6Q96RT7 1819 aa18.81■□□□□ 0.6
CAPNS1-213ENST00000592354 LY75O60449 1722 aa18.8■□□□□ 0.6
CAPNS1-213ENST00000592354 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
CAPNS1-213ENST00000592354 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
CAPNS1-213ENST00000592354 SLC15A2Q16348 729 aa18.79■□□□□ 0.6
CAPNS1-213ENST00000592354 CARD14Q9BXL6 1004 aa18.79■□□□□ 0.6
CAPNS1-213ENST00000592354 TIMELESSQ9UNS1 1208 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms