RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 HOXC9P31274 260 aa14.33□□□□□ -0.12
SMAD4-214ENST00000592186 MEX3CQ5U5Q3 659 aaKnown RBP14.32□□□□□ -0.12
SMAD4-214ENST00000592186 MIER1Q8N108 512 aa14.32□□□□□ -0.12
SMAD4-214ENST00000592186 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
SMAD4-214ENST00000592186 MARF1Q9Y4F3 1742 aaKnown RBP14.32□□□□□ -0.12
SMAD4-214ENST00000592186 BLMP54132 1417 aaPredicted RBP14.31□□□□□ -0.12
SMAD4-214ENST00000592186 DIAPH1O60610 1272 aaKnown RBP14.31□□□□□ -0.12
SMAD4-214ENST00000592186 CHRNA2Q15822 529 aa14.31□□□□□ -0.12
SMAD4-214ENST00000592186 HSP90AB2PQ58FF8 381 aa14.31□□□□□ -0.12
SMAD4-214ENST00000592186 NGLY1Q96IV0 654 aa14.31□□□□□ -0.12
SMAD4-214ENST00000592186 NUDCQ9Y266 331 aa14.31□□□□□ -0.12
SMAD4-214ENST00000592186 PHRF1Q9P1Y6 1649 aaKnown RBP14.31□□□□□ -0.12
SMAD4-214ENST00000592186 ABCC6O95255 1503 aa14.3□□□□□ -0.12
SMAD4-214ENST00000592186 EVA1CP58658 441 aa14.3□□□□□ -0.12
SMAD4-214ENST00000592186 CRYBG1Q9Y4K1 1723 aa14.3□□□□□ -0.12
SMAD4-214ENST00000592186 CDK12Q9NYV4 1490 aaPredicted RBP14.29□□□□□ -0.12
SMAD4-214ENST00000592186 ILDR1Q86SU0 546 aaPredicted RBP14.29□□□□□ -0.12
SMAD4-214ENST00000592186 FNBP4Q8N3X1 1017 aaPredicted RBP14.29□□□□□ -0.12
SMAD4-214ENST00000592186 AXIN2Q9Y2T1 843 aa14.29□□□□□ -0.12
SMAD4-214ENST00000592186 C8orf37Q96NL8 207 aa14.28□□□□□ -0.12
SMAD4-214ENST00000592186 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
SMAD4-214ENST00000592186 BTG4Q9NY30 223 aa14.28□□□□□ -0.12
SMAD4-214ENST00000592186 ANKRD24Q8TF21 1146 aa14.27□□□□□ -0.12
SMAD4-214ENST00000592186 CSB-PGBD3P0DP91 1061 aa14.26□□□□□ -0.13
SMAD4-214ENST00000592186 IL13P35225 146 aa14.26□□□□□ -0.13
SMAD4-214ENST00000592186 EIF4A2Q14240 407 aaKnown RBP14.26□□□□□ -0.13
SMAD4-214ENST00000592186 ABCA3Q99758 1704 aa14.26□□□□□ -0.13
SMAD4-214ENST00000592186 MAP2P11137 1827 aaKnown RBP14.26□□□□□ -0.13
SMAD4-214ENST00000592186 COL14A1Q05707 1796 aaKnown RBP14.25□□□□□ -0.13
SMAD4-214ENST00000592186 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
SMAD4-214ENST00000592186 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
SMAD4-214ENST00000592186 LTV1Q96GA3 475 aaPredicted RBP14.25□□□□□ -0.13
SMAD4-214ENST00000592186 ERBB3P21860 1342 aa14.25□□□□□ -0.13
SMAD4-214ENST00000592186 WDR17Q8IZU2 1322 aa14.25□□□□□ -0.13
SMAD4-214ENST00000592186 LRP6O75581 1613 aa14.25□□□□□ -0.13
SMAD4-214ENST00000592186 WDR43Q15061 677 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMAD4-214ENST00000592186 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
SMAD4-214ENST00000592186 USP21Q9UK80 565 aa14.24□□□□□ -0.13
SMAD4-214ENST00000592186 SLIT2O94813 1529 aa14.23□□□□□ -0.13
SMAD4-214ENST00000592186 LTN1O94822 1766 aa14.23□□□□□ -0.13
SMAD4-214ENST00000592186 TOM1L2Q6ZVM7 507 aa14.23□□□□□ -0.13
SMAD4-214ENST00000592186 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
SMAD4-214ENST00000592186 STRN4Q9NRL3 753 aa14.23□□□□□ -0.13
SMAD4-214ENST00000592186 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
SMAD4-214ENST00000592186 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
SMAD4-214ENST00000592186 U2SURPO15042 1029 aaKnown RBP14.22□□□□□ -0.13
SMAD4-214ENST00000592186 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
SMAD4-214ENST00000592186 COL18A1P39060 1754 aa14.22□□□□□ -0.13
SMAD4-214ENST00000592186 PEAK1Q9H792 1746 aa14.22□□□□□ -0.13
SMAD4-214ENST00000592186 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
SMAD4-214ENST00000592186 AFF2P51816 1311 aa14.21□□□□□ -0.13
SMAD4-214ENST00000592186 FCHSD2O94868 740 aa14.21□□□□□ -0.13
SMAD4-214ENST00000592186 U2AF1L5P0DN76 240 aaPredicted RBP14.21□□□□□ -0.13
SMAD4-214ENST00000592186 U2AF1Q01081 240 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMAD4-214ENST00000592186 CCDC184Q52MB2 194 aa14.21□□□□□ -0.13
SMAD4-214ENST00000592186 NBPF6Q5VWK0 638 aa14.21□□□□□ -0.13
SMAD4-214ENST00000592186 ZNF772Q68DY9 489 aaPredicted RBP14.21□□□□□ -0.13
SMAD4-214ENST00000592186 NBPF4Q96M43 638 aa14.21□□□□□ -0.13
SMAD4-214ENST00000592186 EYA1Q99502 592 aa14.21□□□□□ -0.13
SMAD4-214ENST00000592186 LMO7Q8WWI1 1683 aa14.21□□□□□ -0.13
SMAD4-214ENST00000592186 COL3A1P02461 1466 aaPredicted RBP14.21□□□□□ -0.14
SMAD4-214ENST00000592186 IGSF1Q8N6C5 1336 aa14.2□□□□□ -0.14
SMAD4-214ENST00000592186 VPS72Q15906 364 aa14.2□□□□□ -0.14
SMAD4-214ENST00000592186 LARP1Q6PKG0 1096 aaKnown RBP14.2□□□□□ -0.14
SMAD4-214ENST00000592186 TRPC5Q9UL62 973 aaPredicted RBP14.2□□□□□ -0.14
SMAD4-214ENST00000592186 THRAP3Q9Y2W1 955 aaKnown RBP14.2□□□□□ -0.14
SMAD4-214ENST00000592186 BCL9LQ86UU0 1499 aa14.2□□□□□ -0.14
SMAD4-214ENST00000592186 CRB1P82279 1406 aa14.19□□□□□ -0.14
SMAD4-214ENST00000592186 NEFMP07197 916 aa14.18□□□□□ -0.14
SMAD4-214ENST00000592186 SULT6B1Q6IMI4 303 aa14.18□□□□□ -0.14
SMAD4-214ENST00000592186 CDCA7Q9BWT1 371 aaPredicted RBP14.18□□□□□ -0.14
SMAD4-214ENST00000592186 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
SMAD4-214ENST00000592186 CCDC9Q9Y3X0 531 aaKnown RBP14.18□□□□□ -0.14
SMAD4-214ENST00000592186 NWD2Q9ULI1 1742 aa14.18□□□□□ -0.14
SMAD4-214ENST00000592186 SPATA31A5Q5VU36 1347 aa14.18□□□□□ -0.14
SMAD4-214ENST00000592186 SPATA31A7Q8IWB4 1347 aa14.18□□□□□ -0.14
SMAD4-214ENST00000592186 TCP11L2Q8N4U5 519 aa14.17□□□□□ -0.14
SMAD4-214ENST00000592186 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
SMAD4-214ENST00000592186 QTRT2Q9H974 415 aaKnown RBP14.17□□□□□ -0.14
SMAD4-214ENST00000592186 SPATA31A1Q5TZJ5 1347 aa14.17□□□□□ -0.14
SMAD4-214ENST00000592186 FAM9BQ8IZU0 186 aa14.16□□□□□ -0.14
SMAD4-214ENST00000592186 KDRP35968 1356 aa14.16□□□□□ -0.14
SMAD4-214ENST00000592186 PLEKHG2Q9H7P9 1386 aa14.16□□□□□ -0.14
SMAD4-214ENST00000592186 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
SMAD4-214ENST00000592186 BARGINQ6ZT62 677 aa14.15□□□□□ -0.14
SMAD4-214ENST00000592186 GJD4Q96KN9 370 aaPredicted RBP14.15□□□□□ -0.14
SMAD4-214ENST00000592186 NCAPD2Q15021 1401 aa14.15□□□□□ -0.14
SMAD4-214ENST00000592186 HMOX1P09601 288 aa14.15□□□□□ -0.15
SMAD4-214ENST00000592186 IL2RBP14784 551 aa14.15□□□□□ -0.15
SMAD4-214ENST00000592186 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.15
SMAD4-214ENST00000592186 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.15□□□□□ -0.159e-8■□□□□ 10.8
SMAD4-214ENST00000592186 USP35Q9P2H5 1018 aa14.15□□□□□ -0.15
SMAD4-214ENST00000592186 PLCH1Q4KWH8 1693 aa14.14□□□□□ -0.15
SMAD4-214ENST00000592186 FAM208AQ9UK61 1670 aaKnown RBP14.14□□□□□ -0.15
SMAD4-214ENST00000592186 TATP17735 454 aaPredicted RBP14.14□□□□□ -0.15
SMAD4-214ENST00000592186 AMOTQ4VCS5 1084 aa14.14□□□□□ -0.15
SMAD4-214ENST00000592186 USHBP1Q8N6Y0 703 aa14.14□□□□□ -0.15
SMAD4-214ENST00000592186 RUNDC1Q96C34 613 aa14.14□□□□□ -0.15
SMAD4-214ENST00000592186 ATRNO75882 1429 aa14.13□□□□□ -0.15
SMAD4-214ENST00000592186 KCNA4P22459 653 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms