RNA–Protein interactions for RNA: ENST00000591659.5

CIRBP-234, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-234	ENST00000591659	AXIN2	Q9Y2T1	843 aa		28.93	■■■□□ 2.22
CIRBP-234	ENST00000591659	TMF1	P82094	1093 aa		28.91	■■■□□ 2.22
CIRBP-234	ENST00000591659	SF3B2	Q13435	895 aa	Known RBP	28.9	■■■□□ 2.22
CIRBP-234	ENST00000591659	DEFB132	Q7Z7B7	95 aa		28.9	■■■□□ 2.22
CIRBP-234	ENST00000591659	CCER1	Q8TC90	406 aa	Predicted RBP	28.9	■■■□□ 2.22
CIRBP-234	ENST00000591659	THRAP3	Q9Y2W1	955 aa	Known RBP	28.9	■■■□□ 2.22
CIRBP-234	ENST00000591659	OVOS2	A0A0J9YW53	1432 aa		28.87	■■■□□ 2.21
CIRBP-234	ENST00000591659	OVOS2	Q6IE36	1432 aa		28.87	■■■□□ 2.21
CIRBP-234	ENST00000591659	WDR17	Q8IZU2	1322 aa		28.87	■■■□□ 2.21
CIRBP-234	ENST00000591659	TOM1L2	Q6ZVM7	507 aa		28.86	■■■□□ 2.21
CIRBP-234	ENST00000591659	ANKRD36B	Q8N2N9	1353 aa		28.85	■■■□□ 2.21
CIRBP-234	ENST00000591659	ABCC6	O95255	1503 aa		28.84	■■■□□ 2.21
CIRBP-234	ENST00000591659	PARP4	Q9UKK3	1724 aa	Known RBP	28.83	■■■□□ 2.21
CIRBP-234	ENST00000591659	PDE3B	Q13370	1112 aa		28.82	■■■□□ 2.2
CIRBP-234	ENST00000591659	RGPD5	Q99666	1765 aa		28.82	■■■□□ 2.2
CIRBP-234	ENST00000591659	RGPD1	P0DJD0	1748 aa		28.81	■■■□□ 2.2
CIRBP-234	ENST00000591659	FAM196A	Q6ZSG2	479 aa		28.8	■■■□□ 2.2
CIRBP-234	ENST00000591659	CSB-PGBD3	P0DP91	1061 aa		28.79	■■■□□ 2.2
CIRBP-234	ENST00000591659	BAG6	P46379	1132 aa		28.79	■■■□□ 2.2
CIRBP-234	ENST00000591659	CDCA8	Q53HL2	280 aa		28.79	■■■□□ 2.2
CIRBP-234	ENST00000591659	TNS1	Q9HBL0	1735 aa	Known RBP	28.77	■■■□□ 2.2
CIRBP-234	ENST00000591659	LRRC37A3	O60309	1634 aa		28.77	■■■□□ 2.2
CIRBP-234	ENST00000591659	LTN1	O94822	1766 aa		28.77	■■■□□ 2.2
CIRBP-234	ENST00000591659	CARD10	Q9BWT7	1032 aa		28.76	■■■□□ 2.19
CIRBP-234	ENST00000591659	WNK3	Q9BYP7	1800 aa		28.75	■■■□□ 2.19
CIRBP-234	ENST00000591659	ERBB3	P21860	1342 aa		28.74	■■■□□ 2.19
CIRBP-234	ENST00000591659	TRIM37	O94972	964 aa		28.74	■■■□□ 2.19
CIRBP-234	ENST00000591659	COG3	Q96JB2	828 aa		28.74	■■■□□ 2.19
CIRBP-234	ENST00000591659	DISP2	A7MBM2	1401 aa		28.74	■■■□□ 2.19
CIRBP-234	ENST00000591659	EN1	Q05925	392 aa	Predicted RBP	28.73	■■■□□ 2.19
CIRBP-234	ENST00000591659	MYOM1	P52179	1685 aa		28.73	■■■□□ 2.19
CIRBP-234	ENST00000591659	DDB1	Q16531	1140 aa		28.72	■■■□□ 2.19
CIRBP-234	ENST00000591659	CCDC7	Q96M83	1385 aa		28.71	■■■□□ 2.19
CIRBP-234	ENST00000591659	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.7	■■■□□ 2.18
CIRBP-234	ENST00000591659	FYB1	O15117	783 aa		28.69	■■■□□ 2.18
CIRBP-234	ENST00000591659	PEAK1	Q9H792	1746 aa		28.69	■■■□□ 2.18
CIRBP-234	ENST00000591659	OVOS2	A0A0G2JMS6	1433 aa		28.69	■■■□□ 2.18
CIRBP-234	ENST00000591659	ANKRD24	Q8TF21	1146 aa		28.68	■■■□□ 2.18
CIRBP-234	ENST00000591659	FBLN1	P23142	703 aa		28.67	■■■□□ 2.18
CIRBP-234	ENST00000591659	GGNBP2	Q9H3C7	697 aa		28.67	■■■□□ 2.18
CIRBP-234	ENST00000591659	MAP3K19	Q56UN5	1328 aa		28.67	■■■□□ 2.18
CIRBP-234	ENST00000591659	IP6K1	Q92551	441 aa		28.66	■■■□□ 2.18
CIRBP-234	ENST00000591659	NLRP2	Q9NX02	1062 aa		28.66	■■■□□ 2.18
CIRBP-234	ENST00000591659	APBA3	O96018	575 aa		28.65	■■■□□ 2.18
CIRBP-234	ENST00000591659	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.65	■■■□□ 2.18
CIRBP-234	ENST00000591659	EZH2	Q15910	746 aa	Known RBP	28.65	■■■□□ 2.18
CIRBP-234	ENST00000591659	HSPA5	P11021	654 aa	Known RBP	28.64	■■■□□ 2.18
CIRBP-234	ENST00000591659	CARD14	Q9BXL6	1004 aa		28.64	■■■□□ 2.18
CIRBP-234	ENST00000591659	C11orf95	C9JLR9	678 aa	Predicted RBP	28.63	■■■□□ 2.17
CIRBP-234	ENST00000591659	MARCH10	Q8NA82	808 aa	Predicted RBP	28.63	■■■□□ 2.17
CIRBP-234	ENST00000591659	CAMKK2	Q96RR4	588 aa		28.63	■■■□□ 2.17
CIRBP-234	ENST00000591659	NSD3	Q9BZ95	1437 aa		28.62	■■■□□ 2.17
CIRBP-234	ENST00000591659	KIF20B	Q96Q89	1820 aa		28.61	■■■□□ 2.17
CIRBP-234	ENST00000591659	TNS2	Q63HR2	1409 aa		28.6	■■■□□ 2.17
CIRBP-234	ENST00000591659	HOXC9	P31274	260 aa		28.6	■■■□□ 2.17
CIRBP-234	ENST00000591659	EXOC5	O00471	708 aa		28.59	■■■□□ 2.17
CIRBP-234	ENST00000591659	AMPH	P49418	695 aa		28.59	■■■□□ 2.17
CIRBP-234	ENST00000591659	RRS1	Q15050	365 aa	Known RBP	28.58	■■■□□ 2.17
CIRBP-234	ENST00000591659	LTV1	Q96GA3	475 aa	Predicted RBP	28.58	■■■□□ 2.17
CIRBP-234	ENST00000591659	PARD3	Q8TEW0	1356 aa		28.58	■■■□□ 2.17
CIRBP-234	ENST00000591659	BCL9	O00512	1426 aa		28.58	■■■□□ 2.17
CIRBP-234	ENST00000591659	IL2RB	P14784	551 aa		28.57	■■■□□ 2.16
CIRBP-234	ENST00000591659	POLR3GL	Q9BT43	218 aa		28.57	■■■□□ 2.16
CIRBP-234	ENST00000591659	RTL1	A6NKG5	1358 aa		28.57	■■■□□ 2.16
CIRBP-234	ENST00000591659	FAM208A	Q9UK61	1670 aa	Known RBP	28.55	■■■□□ 2.16
CIRBP-234	ENST00000591659	PSD	A5PKW4	1024 aa	Predicted RBP	28.55	■■■□□ 2.16
CIRBP-234	ENST00000591659	SBF2	Q86WG5	1849 aa		28.54	■■■□□ 2.16
CIRBP-234	ENST00000591659	RREB1	Q92766	1687 aa		28.54	■■■□□ 2.16
CIRBP-234	ENST00000591659	PTF1A	Q7RTS3	328 aa		28.53	■■■□□ 2.16
CIRBP-234	ENST00000591659	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.51	■■■□□ 2.15
CIRBP-234	ENST00000591659	R3HDM1	Q15032	1099 aa	Known RBP	28.49	■■■□□ 2.15
CIRBP-234	ENST00000591659	NUP188	Q5SRE5	1749 aa		28.49	■■■□□ 2.15
CIRBP-234	ENST00000591659	CGNL1	Q0VF96	1302 aa		28.47	■■■□□ 2.15
CIRBP-234	ENST00000591659	FLT4	P35916	1363 aa		28.46	■■■□□ 2.15
CIRBP-234	ENST00000591659	KIF24	Q5T7B8	1368 aa		28.46	■■■□□ 2.15
CIRBP-234	ENST00000591659	SRCAP	Q6ZRS2	3230 aa		28.46	■■■□□ 2.15
CIRBP-234	ENST00000591659	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.45	■■■□□ 2.15
CIRBP-234	ENST00000591659	RGPD4	Q7Z3J3	1758 aa		28.45	■■■□□ 2.15
CIRBP-234	ENST00000591659	PLSCR1	O15162	318 aa		28.45	■■■□□ 2.14
CIRBP-234	ENST00000591659	HSP90AB2P	Q58FF8	381 aa		28.45	■■■□□ 2.14
CIRBP-234	ENST00000591659	INSR	P06213	1382 aa		28.45	■■■□□ 2.14
CIRBP-234	ENST00000591659	RGPD2	P0DJD1	1756 aa		28.45	■■■□□ 2.14
CIRBP-234	ENST00000591659	EMILIN1	Q9Y6C2	1016 aa		28.44	■■■□□ 2.14
CIRBP-234	ENST00000591659	SMG6	Q86US8	1419 aa	Known RBP	28.43	■■■□□ 2.14
CIRBP-234	ENST00000591659	NBPF6	Q5VWK0	638 aa		28.43	■■■□□ 2.14
CIRBP-234	ENST00000591659	NBPF4	Q96M43	638 aa		28.43	■■■□□ 2.14
CIRBP-234	ENST00000591659	KCNQ2	O43526	872 aa		28.42	■■■□□ 2.14
CIRBP-234	ENST00000591659	MEGF6	O75095	1541 aa		28.42	■■■□□ 2.14
CIRBP-234	ENST00000591659	NHS	Q6T4R5	1651 aa		28.42	■■■□□ 2.14
CIRBP-234	ENST00000591659	ACSBG1	Q96GR2	724 aa		28.41	■■■□□ 2.14
CIRBP-234	ENST00000591659	PANK3	Q9H999	370 aa		28.41	■■■□□ 2.14
CIRBP-234	ENST00000591659	USHBP1	Q8N6Y0	703 aa		28.4	■■■□□ 2.14
CIRBP-234	ENST00000591659	LRP5	O75197	1615 aa		28.4	■■■□□ 2.14
CIRBP-234	ENST00000591659	ANKRD26	Q9UPS8	1709 aa		28.38	■■■□□ 2.13
CIRBP-234	ENST00000591659	NBPF14	Q5TI25	921 aa		28.38	■■■□□ 2.13
CIRBP-234	ENST00000591659	DDX54	Q8TDD1	881 aa	Known RBP	28.38	■■■□□ 2.13
CIRBP-234	ENST00000591659	PROM2	Q8N271	834 aa		28.37	■■■□□ 2.13
CIRBP-234	ENST00000591659	PPM1G	O15355	546 aa	Predicted RBP	28.35	■■■□□ 2.13
CIRBP-234	ENST00000591659	SHANK3	Q9BYB0	1731 aa		28.34	■■■□□ 2.13
CIRBP-234	ENST00000591659	ZCRB1	Q8TBF4	217 aa	Known RBP	28.33	■■■□□ 2.13

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