RNA–Protein interactions for RNA: ENST00000591303.2

PCSK4-211, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-211ENST00000591303 MARCH10Q8NA82 808 aaPredicted RBP28.59■■■□□ 2.17
PCSK4-211ENST00000591303 COL18A1P39060 1754 aa28.59■■■□□ 2.17
PCSK4-211ENST00000591303 BCL9O00512 1426 aa28.59■■■□□ 2.17
PCSK4-211ENST00000591303 SLC15A2Q16348 729 aa28.58■■■□□ 2.17
PCSK4-211ENST00000591303 TXNRD1Q16881 649 aa28.58■■■□□ 2.17
PCSK4-211ENST00000591303 MTFR1LQ9H019 292 aa28.57■■■□□ 2.16
PCSK4-211ENST00000591303 STK32BQ9NY57 414 aa28.56■■■□□ 2.16
PCSK4-211ENST00000591303 KDM2AQ9Y2K7 1162 aa28.56■■■□□ 2.16
PCSK4-211ENST00000591303 CCDC61Q9Y6R9 512 aa28.56■■■□□ 2.16
PCSK4-211ENST00000591303 NLRP13Q86W25 1043 aa28.54■■■□□ 2.16
PCSK4-211ENST00000591303 AATKQ6ZMQ8 1374 aa28.52■■■□□ 2.16
PCSK4-211ENST00000591303 DCAF11Q8TEB1 546 aa28.52■■■□□ 2.16
PCSK4-211ENST00000591303 SLIT3O75094 1523 aa28.52■■■□□ 2.16
PCSK4-211ENST00000591303 MAP3K5Q99683 1374 aa28.51■■■□□ 2.16
PCSK4-211ENST00000591303 PAPPAQ13219 1627 aa28.51■■■□□ 2.15
PCSK4-211ENST00000591303 ARXQ96QS3 562 aa28.5■■■□□ 2.15
PCSK4-211ENST00000591303 ZBTB7CA1YPR0 619 aa28.49■■■□□ 2.15
PCSK4-211ENST00000591303 TOM1L2Q6ZVM7 507 aa28.49■■■□□ 2.15
PCSK4-211ENST00000591303 RGPD5Q99666 1765 aa28.49■■■□□ 2.15
PCSK4-211ENST00000591303 SHANK3Q9BYB0 1731 aa28.49■■■□□ 2.15
PCSK4-211ENST00000591303 AXIN2Q9Y2T1 843 aa28.48■■■□□ 2.15
PCSK4-211ENST00000591303 GIGYF1O75420 1035 aaPredicted RBP28.47■■■□□ 2.15
PCSK4-211ENST00000591303 WDR17Q8IZU2 1322 aa28.45■■■□□ 2.15
PCSK4-211ENST00000591303 NHSQ6T4R5 1651 aa28.45■■■□□ 2.14
PCSK4-211ENST00000591303 PPIP5K1Q6PFW1 1433 aa28.43■■■□□ 2.14
PCSK4-211ENST00000591303 PIK3C2AO00443 1686 aa28.42■■■□□ 2.14
PCSK4-211ENST00000591303 GPR162Q16538 588 aa28.4■■■□□ 2.14
PCSK4-211ENST00000591303 CDCA7Q9BWT1 371 aaPredicted RBP28.4■■■□□ 2.14
PCSK4-211ENST00000591303 COL24A1Q17RW2 1714 aa28.4■■■□□ 2.14
PCSK4-211ENST00000591303 NLRP6P59044 892 aa28.39■■■□□ 2.14
PCSK4-211ENST00000591303 USP6P35125 1406 aa28.38■■■□□ 2.13
PCSK4-211ENST00000591303 BRD4O60885 1362 aaPredicted RBP28.37■■■□□ 2.13
PCSK4-211ENST00000591303 CPSF1Q10570 1443 aaKnown RBP28.37■■■□□ 2.13
PCSK4-211ENST00000591303 ZNF827Q17R98 1081 aa28.37■■■□□ 2.13
PCSK4-211ENST00000591303 BTAF1O14981 1849 aa28.36■■■□□ 2.13
PCSK4-211ENST00000591303 STAC3Q96MF2 364 aa28.35■■■□□ 2.13
PCSK4-211ENST00000591303 CARD10Q9BWT7 1032 aa28.35■■■□□ 2.13
PCSK4-211ENST00000591303 TRPM1Q7Z4N2 1603 aa28.35■■■□□ 2.13
PCSK4-211ENST00000591303 TNS2Q63HR2 1409 aa28.34■■■□□ 2.13
PCSK4-211ENST00000591303 CABP2Q9NPB3 220 aa28.33■■■□□ 2.13
PCSK4-211ENST00000591303 QSER1Q2KHR3 1735 aa28.32■■■□□ 2.12
PCSK4-211ENST00000591303 EXOC5O00471 708 aa28.32■■■□□ 2.12
PCSK4-211ENST00000591303 ARHGEF25Q86VW2 580 aa28.32■■■□□ 2.12
PCSK4-211ENST00000591303 KIAA1210Q9ULL0 1709 aa28.32■■■□□ 2.12
PCSK4-211ENST00000591303 SRPK2P78362 688 aaKnown RBP28.31■■■□□ 2.12
PCSK4-211ENST00000591303 ACSBG1Q96GR2 724 aa28.31■■■□□ 2.12
PCSK4-211ENST00000591303 LRRC4BQ9NT99 713 aa28.3■■■□□ 2.12
PCSK4-211ENST00000591303 TUBGCP6Q96RT7 1819 aa28.29■■■□□ 2.12
PCSK4-211ENST00000591303 QRICH2Q9H0J4 1663 aa28.29■■■□□ 2.12
PCSK4-211ENST00000591303 ABCC6O95255 1503 aa28.28■■■□□ 2.12
PCSK4-211ENST00000591303 NLGN2Q8NFZ4 835 aa28.28■■■□□ 2.12
PCSK4-211ENST00000591303 CABP1Q9NZU7 370 aa28.28■■■□□ 2.12
PCSK4-211ENST00000591303 PELP1Q8IZL8 1130 aaKnown RBP28.27■■■□□ 2.12
PCSK4-211ENST00000591303 KLHL34Q8N239 644 aa28.27■■■□□ 2.12
PCSK4-211ENST00000591303 RAB3GAP2Q9H2M9 1393 aa28.26■■■□□ 2.12
PCSK4-211ENST00000591303 CSB-PGBD3P0DP91 1061 aa28.25■■■□□ 2.11
PCSK4-211ENST00000591303 NFAT5O94916 1531 aa28.24■■■□□ 2.11
PCSK4-211ENST00000591303 NBPF1Q3BBV0 1214 aa28.24■■■□□ 2.11
PCSK4-211ENST00000591303 AKT1S1Q96B36 256 aa28.24■■■□□ 2.11
PCSK4-211ENST00000591303 CCDC7Q96M83 1385 aa28.24■■■□□ 2.11
PCSK4-211ENST00000591303 YBX3P16989 372 aaKnown RBP eCLIP28.22■■■□□ 2.11
PCSK4-211ENST00000591303 SOX12O15370 315 aa28.21■■■□□ 2.11
PCSK4-211ENST00000591303 PNPLA7Q6ZV29 1317 aa28.2■■■□□ 2.11
PCSK4-211ENST00000591303 KAT6BQ8WYB5 2073 aa28.2■■■□□ 2.11
PCSK4-211ENST00000591303 SLC16A10Q8TF71 515 aa28.2■■■□□ 2.1
PCSK4-211ENST00000591303 CENPJQ9HC77 1338 aaPredicted RBP28.18■■■□□ 2.1
PCSK4-211ENST00000591303 ATP10DQ9P241 1426 aa28.18■■■□□ 2.1
PCSK4-211ENST00000591303 POLD1P28340 1107 aa28.17■■■□□ 2.1
PCSK4-211ENST00000591303 KCNH5Q8NCM2 988 aa28.17■■■□□ 2.1
PCSK4-211ENST00000591303 TTC21BQ7Z4L5 1316 aa28.16■■■□□ 2.1
PCSK4-211ENST00000591303 KCNQ4P56696 695 aa28.11■■■□□ 2.09
PCSK4-211ENST00000591303 GRIN3BO60391 1043 aa28.1■■■□□ 2.09
PCSK4-211ENST00000591303 HSPA6P17066 643 aa28.1■■■□□ 2.09
PCSK4-211ENST00000591303 ERBB3P21860 1342 aa28.09■■■□□ 2.09
PCSK4-211ENST00000591303 LY75O60449 1722 aa28.09■■■□□ 2.09
PCSK4-211ENST00000591303 IL2RBP14784 551 aa28.08■■■□□ 2.09
PCSK4-211ENST00000591303 SLC27A3Q5K4L6 730 aa28.08■■■□□ 2.09
PCSK4-211ENST00000591303 LTN1O94822 1766 aa28.08■■■□□ 2.09
PCSK4-211ENST00000591303 ADCY9O60503 1353 aa28.08■■■□□ 2.09
PCSK4-211ENST00000591303 TFCP2L1Q9NZI6 479 aa28.06■■■□□ 2.08
PCSK4-211ENST00000591303 TTC21AQ8NDW8 1320 aa28.05■■■□□ 2.08
PCSK4-211ENST00000591303 NLRP2Q9NX02 1062 aa28.05■■■□□ 2.08
PCSK4-211ENST00000591303 USP54Q70EL1 1684 aa28.04■■■□□ 2.08
PCSK4-211ENST00000591303 GPBP1L1Q9HC44 474 aaPredicted RBP28.04■■■□□ 2.08
PCSK4-211ENST00000591303 MON2Q7Z3U7 1717 aa28.02■■■□□ 2.08
PCSK4-211ENST00000591303 ZNF692Q9BU19 519 aaPredicted RBP28.02■■■□□ 2.08
PCSK4-211ENST00000591303 DOT1LQ8TEK3 1739 aa28.01■■■□□ 2.07
PCSK4-211ENST00000591303 ZNF526Q8TF50 670 aaPredicted RBP27.99■■■□□ 2.07
PCSK4-211ENST00000591303 NSD2O96028 1365 aa27.99■■■□□ 2.07
PCSK4-211ENST00000591303 EVC2Q86UK5 1308 aa27.97■■■□□ 2.07
PCSK4-211ENST00000591303 COL23A1Q86Y22 540 aaPredicted RBP27.97■■■□□ 2.07
PCSK4-211ENST00000591303 ANKRD24Q8TF21 1146 aa27.96■■■□□ 2.07
PCSK4-211ENST00000591303 USP31Q70CQ4 1352 aa27.96■■■□□ 2.07
PCSK4-211ENST00000591303 KTN1Q86UP2 1357 aaKnown RBP27.95■■■□□ 2.06
PCSK4-211ENST00000591303 MSL1Q68DK7 614 aa27.94■■■□□ 2.06
PCSK4-211ENST00000591303 DDX54Q8TDD1 881 aaKnown RBP27.94■■■□□ 2.06
PCSK4-211ENST00000591303 PRIM1P49642 420 aaKnown RBP27.93■■■□□ 2.06
PCSK4-211ENST00000591303 ANKRD36BQ8N2N9 1353 aa27.92■■■□□ 2.06
PCSK4-211ENST00000591303 SYTL4Q96C24 671 aaPredicted RBP27.9■■■□□ 2.06
PCSK4-211ENST00000591303 KIF3CO14782 793 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms