RNA–Protein interactions for RNA: ENST00000590952.1

LINC01534-203, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 4

Gene LINC01534, Length 550 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-203ENST00000590952 COL18A1P39060 1754 aa22.88■■□□□ 1.25
LINC01534-203ENST00000590952 TTC21AQ8NDW8 1320 aa22.87■■□□□ 1.25
LINC01534-203ENST00000590952 KCNQ2O43526 872 aa22.87■■□□□ 1.25
LINC01534-203ENST00000590952 CPSF1Q10570 1443 aaKnown RBP22.87■■□□□ 1.25
LINC01534-203ENST00000590952 TRPM1Q7Z4N2 1603 aa22.86■■□□□ 1.25
LINC01534-203ENST00000590952 LRRC37A3O60309 1634 aa22.86■■□□□ 1.25
LINC01534-203ENST00000590952 BCL9O00512 1426 aa22.85■■□□□ 1.25
LINC01534-203ENST00000590952 CARD10Q9BWT7 1032 aa22.85■■□□□ 1.25
LINC01534-203ENST00000590952 RGPD3A6NKT7 1758 aaPredicted RBP22.85■■□□□ 1.25
LINC01534-203ENST00000590952 RGPD4Q7Z3J3 1758 aa22.85■■□□□ 1.25
LINC01534-203ENST00000590952 ROCK2O75116 1388 aaKnown RBP22.85■■□□□ 1.25
LINC01534-203ENST00000590952 MARCH10Q8NA82 808 aaPredicted RBP22.84■■□□□ 1.25
LINC01534-203ENST00000590952 SIN3AQ96ST3 1273 aa22.83■■□□□ 1.25
LINC01534-203ENST00000590952 PPP1R1BQ9UD71 204 aaPredicted RBP22.83■■□□□ 1.25
LINC01534-203ENST00000590952 SBF2Q86WG5 1849 aa22.82■■□□□ 1.24
LINC01534-203ENST00000590952 EXOC5O00471 708 aa22.81■■□□□ 1.24
LINC01534-203ENST00000590952 CSB-PGBD3P0DP91 1061 aa22.81■■□□□ 1.24
LINC01534-203ENST00000590952 KTN1Q86UP2 1357 aaKnown RBP22.8■■□□□ 1.24
LINC01534-203ENST00000590952 PTF1AQ7RTS3 328 aa22.8■■□□□ 1.24
LINC01534-203ENST00000590952 AKAP12Q02952 1782 aa22.8■■□□□ 1.24
LINC01534-203ENST00000590952 SOX12O15370 315 aa22.79■■□□□ 1.24
LINC01534-203ENST00000590952 NEUROD1Q13562 356 aa22.79■■□□□ 1.24
LINC01534-203ENST00000590952 PROM2Q8N271 834 aa22.79■■□□□ 1.24
LINC01534-203ENST00000590952 NINLQ9Y2I6 1382 aa22.78■■□□□ 1.24
LINC01534-203ENST00000590952 WNK3Q9BYP7 1800 aa22.78■■□□□ 1.24
LINC01534-203ENST00000590952 DCAF8L1A6NGE4 600 aa22.78■■□□□ 1.24
LINC01534-203ENST00000590952 CCDC7Q96M83 1385 aa22.77■■□□□ 1.24
LINC01534-203ENST00000590952 NFAT5O94916 1531 aa22.77■■□□□ 1.24
LINC01534-203ENST00000590952 ABCC6O95255 1503 aa22.77■■□□□ 1.24
LINC01534-203ENST00000590952 ANO8Q9HCE9 1232 aaPredicted RBP22.76■■□□□ 1.23
LINC01534-203ENST00000590952 SBNO2Q9Y2G9 1366 aa22.76■■□□□ 1.23
LINC01534-203ENST00000590952 YY1P25490 414 aa22.75■■□□□ 1.23
LINC01534-203ENST00000590952 RGPD5Q99666 1765 aa22.75■■□□□ 1.23
LINC01534-203ENST00000590952 USP31Q70CQ4 1352 aa22.75■■□□□ 1.23
LINC01534-203ENST00000590952 TXNRD1Q16881 649 aa22.73■■□□□ 1.23
LINC01534-203ENST00000590952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.72■■□□□ 1.23
LINC01534-203ENST00000590952 STK32BQ9NY57 414 aa22.71■■□□□ 1.23
LINC01534-203ENST00000590952 CASZ1Q86V15 1759 aa22.71■■□□□ 1.23
LINC01534-203ENST00000590952 MON2Q7Z3U7 1717 aa22.69■■□□□ 1.22
LINC01534-203ENST00000590952 TNS2Q63HR2 1409 aa22.69■■□□□ 1.22
LINC01534-203ENST00000590952 ERBB3P21860 1342 aa22.69■■□□□ 1.22
LINC01534-203ENST00000590952 SLC15A2Q16348 729 aa22.69■■□□□ 1.22
LINC01534-203ENST00000590952 PDGFDQ9GZP0 370 aaPredicted RBP22.69■■□□□ 1.22
LINC01534-203ENST00000590952 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
LINC01534-203ENST00000590952 CARD11Q9BXL7 1154 aa22.68■■□□□ 1.22
LINC01534-203ENST00000590952 NLRP2Q9NX02 1062 aa22.68■■□□□ 1.22
LINC01534-203ENST00000590952 NME9Q86XW9 330 aa22.67■■□□□ 1.22
LINC01534-203ENST00000590952 USP54Q70EL1 1684 aa22.67■■□□□ 1.22
LINC01534-203ENST00000590952 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
LINC01534-203ENST00000590952 ZBTB7AO95365 584 aa22.66■■□□□ 1.22
LINC01534-203ENST00000590952 IL2RBP14784 551 aa22.66■■□□□ 1.22
LINC01534-203ENST00000590952 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
LINC01534-203ENST00000590952 PUS7Q96PZ0 661 aaKnown RBP22.66■■□□□ 1.22
LINC01534-203ENST00000590952 PTGER2P43116 358 aa22.65■■□□□ 1.22
LINC01534-203ENST00000590952 SLC12A5Q9H2X9 1139 aa22.64■■□□□ 1.21
LINC01534-203ENST00000590952 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.21
LINC01534-203ENST00000590952 EDC4Q6P2E9 1401 aaKnown RBP22.64■■□□□ 1.21
LINC01534-203ENST00000590952 ANKRD24Q8TF21 1146 aa22.63■■□□□ 1.21
LINC01534-203ENST00000590952 ATF5Q9Y2D1 282 aaPredicted RBP22.63■■□□□ 1.21
LINC01534-203ENST00000590952 ACSBG1Q96GR2 724 aa22.62■■□□□ 1.21
LINC01534-203ENST00000590952 MTFR1LQ9H019 292 aa22.62■■□□□ 1.21
LINC01534-203ENST00000590952 NHSQ6T4R5 1651 aa22.62■■□□□ 1.21
LINC01534-203ENST00000590952 LTN1O94822 1766 aa22.59■■□□□ 1.21
LINC01534-203ENST00000590952 IP6K1Q92551 441 aa22.58■■□□□ 1.21
LINC01534-203ENST00000590952 SGIP1Q9BQI5 828 aa22.57■■□□□ 1.2
LINC01534-203ENST00000590952 SYT17Q9BSW7 474 aa22.57■■□□□ 1.2
LINC01534-203ENST00000590952 A0A1W2PP64 1363 aa22.57■■□□□ 1.2
LINC01534-203ENST00000590952 MYOM1P52179 1685 aa22.56■■□□□ 1.2
LINC01534-203ENST00000590952 FHDC1Q9C0D6 1143 aaPredicted RBP22.56■■□□□ 1.2
LINC01534-203ENST00000590952 SLC24A1O60721 1099 aa22.55■■□□□ 1.2
LINC01534-203ENST00000590952 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
LINC01534-203ENST00000590952 UTRNP46939 3433 aa22.53■■□□□ 1.2
LINC01534-203ENST00000590952 ARXQ96QS3 562 aa22.52■■□□□ 1.2
LINC01534-203ENST00000590952 LRRC4BQ9NT99 713 aa22.52■■□□□ 1.2
LINC01534-203ENST00000590952 PAPPAQ13219 1627 aa22.52■■□□□ 1.2
LINC01534-203ENST00000590952 BTAF1O14981 1849 aa22.52■■□□□ 1.2
LINC01534-203ENST00000590952 SLC27A3Q5K4L6 730 aa22.51■■□□□ 1.19
LINC01534-203ENST00000590952 DDX54Q8TDD1 881 aaKnown RBP22.51■■□□□ 1.19
LINC01534-203ENST00000590952 COG3Q96JB2 828 aa22.51■■□□□ 1.19
LINC01534-203ENST00000590952 TESK2Q96S53 571 aa22.5■■□□□ 1.19
LINC01534-203ENST00000590952 ZNF827Q17R98 1081 aa22.49■■□□□ 1.19
LINC01534-203ENST00000590952 SLC16A10Q8TF71 515 aa22.49■■□□□ 1.19
LINC01534-203ENST00000590952 LTV1Q96GA3 475 aaPredicted RBP22.49■■□□□ 1.19
LINC01534-203ENST00000590952 FAM208AQ9UK61 1670 aaKnown RBP22.49■■□□□ 1.19
LINC01534-203ENST00000590952 AKT1S1Q96B36 256 aa22.48■■□□□ 1.19
LINC01534-203ENST00000590952 MAP3K5Q99683 1374 aa22.48■■□□□ 1.19
LINC01534-203ENST00000590952 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
LINC01534-203ENST00000590952 HOXC9P31274 260 aa22.47■■□□□ 1.19
LINC01534-203ENST00000590952 KAT6BQ8WYB5 2073 aa22.46■■□□□ 1.19
LINC01534-203ENST00000590952 AMPHP49418 695 aa22.46■■□□□ 1.19
LINC01534-203ENST00000590952 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
LINC01534-203ENST00000590952 PRIM1P49642 420 aaKnown RBP22.44■■□□□ 1.18
LINC01534-203ENST00000590952 ANKRD36BQ8N2N9 1353 aa22.44■■□□□ 1.18
LINC01534-203ENST00000590952 ZNF784Q8NCA9 323 aaPredicted RBP22.44■■□□□ 1.18
LINC01534-203ENST00000590952 ZCRB1Q8TBF4 217 aaKnown RBP22.44■■□□□ 1.18
LINC01534-203ENST00000590952 SYTL4Q96C24 671 aaPredicted RBP22.42■■□□□ 1.18
LINC01534-203ENST00000590952 FBLN1P23142 703 aa22.41■■□□□ 1.18
LINC01534-203ENST00000590952 POLD1P28340 1107 aa22.41■■□□□ 1.18
LINC01534-203ENST00000590952 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
LINC01534-203ENST00000590952 RTL1A6NKG5 1358 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms