RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TNS4Q8IZW8 715 aa9.75□□□□□ -0.85
DNMT1-222ENST00000590619 NUDT16Q96DE0 195 aaKnown RBP9.75□□□□□ -0.85
DNMT1-222ENST00000590619 LRRC4BQ9NT99 713 aa9.75□□□□□ -0.85
DNMT1-222ENST00000590619 TRAK1Q9UPV9 953 aa9.75□□□□□ -0.85
DNMT1-222ENST00000590619 KNDC1Q76NI1 1749 aa9.75□□□□□ -0.85
DNMT1-222ENST00000590619 IFT172Q9UG01 1749 aa9.75□□□□□ -0.85
DNMT1-222ENST00000590619 CRYBG1Q9Y4K1 1723 aa9.75□□□□□ -0.85
DNMT1-222ENST00000590619 RGPD3A6NKT7 1758 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-222ENST00000590619 RGPD4Q7Z3J3 1758 aa9.75□□□□□ -0.85
DNMT1-222ENST00000590619 CRB1P82279 1406 aa9.74□□□□□ -0.85
DNMT1-222ENST00000590619 SPATA31E1Q6ZUB1 1445 aa9.74□□□□□ -0.85
DNMT1-222ENST00000590619 EXOC5O00471 708 aa9.74□□□□□ -0.85
DNMT1-222ENST00000590619 TOM1L2Q6ZVM7 507 aa9.74□□□□□ -0.85
DNMT1-222ENST00000590619 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
DNMT1-222ENST00000590619 AATKQ6ZMQ8 1374 aa9.74□□□□□ -0.85
DNMT1-222ENST00000590619 SBF2Q86WG5 1849 aa9.73□□□□□ -0.85
DNMT1-222ENST00000590619 CDCA7Q9BWT1 371 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-222ENST00000590619 AXIN2Q9Y2T1 843 aa9.73□□□□□ -0.85
DNMT1-222ENST00000590619 COL5A2P05997 1499 aaPredicted RBP9.72□□□□□ -0.85
DNMT1-222ENST00000590619 NLRP13Q86W25 1043 aa9.72□□□□□ -0.85
DNMT1-222ENST00000590619 ACSBG1Q96GR2 724 aa9.72□□□□□ -0.85
DNMT1-222ENST00000590619 PARP4Q9UKK3 1724 aaKnown RBP9.72□□□□□ -0.85
DNMT1-222ENST00000590619 ACEP12821 1306 aa9.72□□□□□ -0.85
DNMT1-222ENST00000590619 ADCY9O60503 1353 aa9.72□□□□□ -0.85
DNMT1-222ENST00000590619 ZBTB7CA1YPR0 619 aa9.71□□□□□ -0.86
DNMT1-222ENST00000590619 JMYQ8N9B5 988 aa9.71□□□□□ -0.86
DNMT1-222ENST00000590619 USP19O94966 1318 aa9.71□□□□□ -0.86
DNMT1-222ENST00000590619 PNPLA7Q6ZV29 1317 aa9.71□□□□□ -0.86
DNMT1-222ENST00000590619 EIF3AQ14152 1382 aaKnown RBP9.71□□□□□ -0.86
DNMT1-222ENST00000590619 PLEKHG3A1L390 1219 aa9.7□□□□□ -0.86
DNMT1-222ENST00000590619 HTRA3P83110 453 aa9.7□□□□□ -0.86
DNMT1-222ENST00000590619 TOMM70O94826 608 aa9.69□□□□□ -0.86
DNMT1-222ENST00000590619 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
DNMT1-222ENST00000590619 KLRG1Q96E93 195 aa9.69□□□□□ -0.86
DNMT1-222ENST00000590619 CDK19Q9BWU1 502 aa9.69□□□□□ -0.86
DNMT1-222ENST00000590619 TULP4Q9NRJ4 1543 aa9.68□□□□□ -0.86
DNMT1-222ENST00000590619 POLR3AO14802 1390 aaPredicted RBP9.68□□□□□ -0.86
DNMT1-222ENST00000590619 CARD10Q9BWT7 1032 aa9.68□□□□□ -0.86
DNMT1-222ENST00000590619 TFCP2L1Q9NZI6 479 aa9.68□□□□□ -0.86
DNMT1-222ENST00000590619 CCDC61Q9Y6R9 512 aa9.68□□□□□ -0.86
DNMT1-222ENST00000590619 PHRF1Q9P1Y6 1649 aaKnown RBP9.67□□□□□ -0.86
DNMT1-222ENST00000590619 WDR17Q8IZU2 1322 aa9.67□□□□□ -0.86
DNMT1-222ENST00000590619 KCNQ4P56696 695 aa9.67□□□□□ -0.86
DNMT1-222ENST00000590619 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
DNMT1-222ENST00000590619 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
DNMT1-222ENST00000590619 WWC3Q9ULE0 1092 aa9.66□□□□□ -0.86
DNMT1-222ENST00000590619 CD2APQ9Y5K6 639 aa9.66□□□□□ -0.86
DNMT1-222ENST00000590619 USP6P35125 1406 aa9.65□□□□□ -0.86
DNMT1-222ENST00000590619 LRRC37A3O60309 1634 aa9.65□□□□□ -0.86
DNMT1-222ENST00000590619 NLRP6P59044 892 aa9.65□□□□□ -0.86
DNMT1-222ENST00000590619 COL23A1Q86Y22 540 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-222ENST00000590619 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
DNMT1-222ENST00000590619 MPHOSPH9Q99550 1183 aa9.65□□□□□ -0.86
DNMT1-222ENST00000590619 CSB-PGBD3P0DP91 1061 aa9.64□□□□□ -0.87
DNMT1-222ENST00000590619 ARHGEF25Q86VW2 580 aa9.64□□□□□ -0.87
DNMT1-222ENST00000590619 MSH5O43196 834 aa9.63□□□□□ -0.87
DNMT1-222ENST00000590619 MSL1Q68DK7 614 aa9.63□□□□□ -0.87
DNMT1-222ENST00000590619 PAPPAQ13219 1627 aa9.63□□□□□ -0.87
DNMT1-222ENST00000590619 NMRK2Q9NPI5 230 aa9.62□□□□□ -0.87
DNMT1-222ENST00000590619 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
DNMT1-222ENST00000590619 BRD4O60885 1362 aaPredicted RBP9.62□□□□□ -0.87
DNMT1-222ENST00000590619 RBM46Q8TBY0 533 aaKnown RBP9.61□□□□□ -0.87
DNMT1-222ENST00000590619 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
DNMT1-222ENST00000590619 PCNTO95613 3336 aa9.6□□□□□ -0.87
DNMT1-222ENST00000590619 ADGRB1O14514 1584 aa9.6□□□□□ -0.87
DNMT1-222ENST00000590619 HSPA1AP0DMV8 641 aaKnown RBP9.59□□□□□ -0.87
DNMT1-222ENST00000590619 HSPA1BP0DMV9 641 aaKnown RBP9.59□□□□□ -0.87
DNMT1-222ENST00000590619 IGSF1Q8N6C5 1336 aa9.58□□□□□ -0.88
DNMT1-222ENST00000590619 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
DNMT1-222ENST00000590619 FSTL1Q12841 308 aa9.58□□□□□ -0.88
DNMT1-222ENST00000590619 CCDC7Q96M83 1385 aa9.58□□□□□ -0.88
DNMT1-222ENST00000590619 COL18A1P39060 1754 aa9.58□□□□□ -0.88
DNMT1-222ENST00000590619 SOX12O15370 315 aa9.57□□□□□ -0.88
DNMT1-222ENST00000590619 IL2RBP14784 551 aa9.57□□□□□ -0.88
DNMT1-222ENST00000590619 CABP1Q9NZU7 370 aa9.57□□□□□ -0.88
DNMT1-222ENST00000590619 TNS2Q63HR2 1409 aa9.56□□□□□ -0.88
DNMT1-222ENST00000590619 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
DNMT1-222ENST00000590619 KCNH5Q8NCM2 988 aa9.56□□□□□ -0.88
DNMT1-222ENST00000590619 DDX54Q8TDD1 881 aaKnown RBP9.56□□□□□ -0.88
DNMT1-222ENST00000590619 DCAF11Q8TEB1 546 aa9.56□□□□□ -0.88
DNMT1-222ENST00000590619 CABP2Q9NPB3 220 aa9.56□□□□□ -0.88
DNMT1-222ENST00000590619 NLRP2Q9NX02 1062 aa9.56□□□□□ -0.88
DNMT1-222ENST00000590619 CCNL1Q9UK58 526 aaPredicted RBP9.56□□□□□ -0.88
DNMT1-222ENST00000590619 PPIP5K1Q6PFW1 1433 aa9.56□□□□□ -0.88
DNMT1-222ENST00000590619 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
DNMT1-222ENST00000590619 AKAP12Q02952 1782 aa9.55□□□□□ -0.88
DNMT1-222ENST00000590619 C16orf71Q8IYS4 520 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-222ENST00000590619 SYTL4Q96C24 671 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-222ENST00000590619 NHSQ6T4R5 1651 aa9.55□□□□□ -0.88
DNMT1-222ENST00000590619 SRPK2P78362 688 aaKnown RBP9.54□□□□□ -0.88
DNMT1-222ENST00000590619 SLIT3O75094 1523 aa9.54□□□□□ -0.88
DNMT1-222ENST00000590619 CPSF1Q10570 1443 aaKnown RBP9.54□□□□□ -0.88
DNMT1-222ENST00000590619 ARHGAP27Q6ZUM4 889 aa9.53□□□□□ -0.88
DNMT1-222ENST00000590619 SMIM5Q71RC9 77 aa9.53□□□□□ -0.88
DNMT1-222ENST00000590619 RRAGCQ9HB90 399 aa9.53□□□□□ -0.88
DNMT1-222ENST00000590619 BTAF1O14981 1849 aa9.53□□□□□ -0.88
DNMT1-222ENST00000590619 QSER1Q2KHR3 1735 aa9.53□□□□□ -0.88
DNMT1-222ENST00000590619 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
DNMT1-222ENST00000590619 FLAD1Q8NFF5 587 aa9.52□□□□□ -0.89
DNMT1-222ENST00000590619 WDR90Q96KV7 1748 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms