RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-223ENST00000590608 MYT1Q01538 1121 aa8.53□□□□□ -1.04
ATP9B-223ENST00000590608 LINC01559Q495D7 138 aa8.53□□□□□ -1.04
ATP9B-223ENST00000590608 RC3H1Q5TC82 1133 aaKnown RBP8.53□□□□□ -1.04
ATP9B-223ENST00000590608 DGAT1O75907 488 aa8.52□□□□□ -1.05
ATP9B-223ENST00000590608 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
ATP9B-223ENST00000590608 SOX11P35716 441 aa8.52□□□□□ -1.05
ATP9B-223ENST00000590608 PKDCCQ504Y2 493 aa8.52□□□□□ -1.05
ATP9B-223ENST00000590608 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.05
ATP9B-223ENST00000590608 RGS22Q8NE09 1264 aa8.52□□□□□ -1.05
ATP9B-223ENST00000590608 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.05
ATP9B-223ENST00000590608 BRD1O95696 1058 aa8.51□□□□□ -1.05
ATP9B-223ENST00000590608 PDE4CQ08493 712 aa8.51□□□□□ -1.05
ATP9B-223ENST00000590608 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
ATP9B-223ENST00000590608 BAP1Q92560 729 aa8.51□□□□□ -1.05
ATP9B-223ENST00000590608 FKBPLQ9UIM3 349 aa8.51□□□□□ -1.05
ATP9B-223ENST00000590608 SMPD1P17405 629 aa8.5□□□□□ -1.05
ATP9B-223ENST00000590608 NR1H3Q13133 447 aa8.5□□□□□ -1.05
ATP9B-223ENST00000590608 ZNF511Q8NB15 262 aa8.5□□□□□ -1.05
ATP9B-223ENST00000590608 ZC3H4Q9UPT8 1303 aaKnown RBP8.5□□□□□ -1.05
ATP9B-223ENST00000590608 TMEM88BA6NKF7 163 aa8.49□□□□□ -1.05
ATP9B-223ENST00000590608 J3QL48 77 aa8.49□□□□□ -1.05
ATP9B-223ENST00000590608 SIAH2O43255 324 aa8.49□□□□□ -1.05
ATP9B-223ENST00000590608 ATP9BO43861 1147 aa8.49□□□□□ -1.05
ATP9B-223ENST00000590608 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATP9B-223ENST00000590608 PNMA1Q8ND90 353 aa8.49□□□□□ -1.05
ATP9B-223ENST00000590608 SNIP1Q8TAD8 396 aaKnown RBP8.49□□□□□ -1.05
ATP9B-223ENST00000590608 TTC24A2A3L6 582 aaPredicted RBP8.48□□□□□ -1.05
ATP9B-223ENST00000590608 ST8SIA5O15466 376 aa8.48□□□□□ -1.05
ATP9B-223ENST00000590608 ATG7O95352 703 aa8.48□□□□□ -1.05
ATP9B-223ENST00000590608 AVPP01185 164 aa8.48□□□□□ -1.05
ATP9B-223ENST00000590608 KCNA1Q09470 495 aa8.48□□□□□ -1.05
ATP9B-223ENST00000590608 ARMC2Q8NEN0 867 aa8.48□□□□□ -1.05
ATP9B-223ENST00000590608 ZNF428Q96B54 188 aa8.48□□□□□ -1.05
ATP9B-223ENST00000590608 IVNS1ABPQ9Y6Y0 642 aa8.48□□□□□ -1.05
ATP9B-223ENST00000590608 EHBP1Q8NDI1 1231 aa8.47□□□□□ -1.05
ATP9B-223ENST00000590608 GPKOWQ92917 476 aaPredicted RBP eCLIP8.47□□□□□ -1.05
ATP9B-223ENST00000590608 OCSTAMPQ9BR26 566 aa8.47□□□□□ -1.05
ATP9B-223ENST00000590608 ZBBXA8MT70 800 aa8.46□□□□□ -1.06
ATP9B-223ENST00000590608 CRIPAKQ8N1N5 446 aa8.46□□□□□ -1.06
ATP9B-223ENST00000590608 DEPDC4Q8N2C3 294 aa8.46□□□□□ -1.06
ATP9B-223ENST00000590608 VRTNQ9H8Y1 702 aa8.46□□□□□ -1.06
ATP9B-223ENST00000590608 AAASQ9NRG9 546 aa8.46□□□□□ -1.06
ATP9B-223ENST00000590608 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
ATP9B-223ENST00000590608 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
ATP9B-223ENST00000590608 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
ATP9B-223ENST00000590608 PDXDC2PQ6P474 469 aa8.45□□□□□ -1.06
ATP9B-223ENST00000590608 SH3BP5LQ7L8J4 393 aa8.45□□□□□ -1.06
ATP9B-223ENST00000590608 FAM174AQ8TBP5 190 aa8.45□□□□□ -1.06
ATP9B-223ENST00000590608 STK32AQ8WU08 396 aa8.45□□□□□ -1.06
ATP9B-223ENST00000590608 FOXJ1Q92949 421 aa8.45□□□□□ -1.06
ATP9B-223ENST00000590608 TLL2Q9Y6L7 1015 aa8.45□□□□□ -1.06
ATP9B-223ENST00000590608 USP17L3A6NCW0 530 aa8.44□□□□□ -1.06
ATP9B-223ENST00000590608 USP17L4A6NCW7 530 aa8.44□□□□□ -1.06
ATP9B-223ENST00000590608 SKIP12755 728 aa8.44□□□□□ -1.06
ATP9B-223ENST00000590608 USP17L2Q6R6M4 530 aa8.44□□□□□ -1.06
ATP9B-223ENST00000590608 USP17L1Q7RTZ2 530 aa8.44□□□□□ -1.06
ATP9B-223ENST00000590608 SH3RF1Q7Z6J0 888 aa8.44□□□□□ -1.06
ATP9B-223ENST00000590608 ZMIZ1Q9ULJ6 1067 aa8.44□□□□□ -1.06
ATP9B-223ENST00000590608 GPSM3Q9Y4H4 160 aa8.44□□□□□ -1.06
ATP9B-223ENST00000590608 HPS1Q92902 700 aa8.43□□□□□ -1.06
ATP9B-223ENST00000590608 DACH1Q9UI36 760 aa8.43□□□□□ -1.06
ATP9B-223ENST00000590608 USP17L5A8MUK1 530 aa8.42□□□□□ -1.06
ATP9B-223ENST00000590608 PATL2C9JE40 543 aaKnown RBP8.42□□□□□ -1.06
ATP9B-223ENST00000590608 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
ATP9B-223ENST00000590608 TMEM164Q5U3C3 297 aa8.42□□□□□ -1.06
ATP9B-223ENST00000590608 POTECB2RU33 542 aa8.41□□□□□ -1.06
ATP9B-223ENST00000590608 VARSP26640 1264 aaKnown RBP8.41□□□□□ -1.06
ATP9B-223ENST00000590608 RBM25P49756 843 aaKnown RBP8.41□□□□□ -1.06
ATP9B-223ENST00000590608 SMCPP49901 116 aaPredicted RBP8.41□□□□□ -1.06
ATP9B-223ENST00000590608 PTK2Q05397 1052 aa8.4□□□□□ -1.06
ATP9B-223ENST00000590608 CTC1Q2NKJ3 1217 aa8.4□□□□□ -1.06
ATP9B-223ENST00000590608 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
ATP9B-223ENST00000590608 NOVA2Q9UNW9 492 aaKnown RBP8.4□□□□□ -1.06
ATP9B-223ENST00000590608 CRTC2Q53ET0 693 aaPredicted RBP8.39□□□□□ -1.07
ATP9B-223ENST00000590608 PCDHB9Q9Y5E1 797 aa8.39□□□□□ -1.07
ATP9B-223ENST00000590608 AXIN1O15169 862 aa8.38□□□□□ -1.07
ATP9B-223ENST00000590608 NCOA4Q13772 614 aa8.38□□□□□ -1.07
ATP9B-223ENST00000590608 BPHLQ86WA6 291 aaPredicted RBP8.38□□□□□ -1.07
ATP9B-223ENST00000590608 MPNDQ8N594 471 aa8.38□□□□□ -1.07
ATP9B-223ENST00000590608 ADAM32Q8TC27 787 aa8.38□□□□□ -1.07
ATP9B-223ENST00000590608 ARHGAP9Q9BRR9 750 aa8.38□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L21D6R901 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 SND1Q7KZF4 910 aaKnown RBP eCLIP8.37□□□□□ -1.07
ATP9B-223ENST00000590608 NFATC2IPQ8NCF5 419 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
ATP9B-223ENST00000590608 MKRN1Q9UHC7 482 aaKnown RBP8.37□□□□□ -1.07
ATP9B-223ENST00000590608 ELOAQ14241 798 aaKnown RBP8.36□□□□□ -1.07
ATP9B-223ENST00000590608 CCDC27Q2M243 656 aa8.36□□□□□ -1.07
ATP9B-223ENST00000590608 SLFNL1Q499Z3 407 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms