RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 AXIN2Q9Y2T1 843 aa26.03■■□□□ 1.76
DDX39A-214ENST00000590556 MAP2P11137 1827 aaKnown RBP26.02■■□□□ 1.76
DDX39A-214ENST00000590556 EVA1CP58658 441 aa26.02■■□□□ 1.76
DDX39A-214ENST00000590556 IP6K1Q92551 441 aa26.02■■□□□ 1.76
DDX39A-214ENST00000590556 ABCC6O95255 1503 aa26.02■■□□□ 1.76
DDX39A-214ENST00000590556 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.01■■□□□ 1.75
DDX39A-214ENST00000590556 QTRT2Q9H974 415 aaKnown RBP26.01■■□□□ 1.75
DDX39A-214ENST00000590556 STRN4Q9NRL3 753 aa26.01■■□□□ 1.75
DDX39A-214ENST00000590556 RGPD5Q99666 1765 aa26■■□□□ 1.75
DDX39A-214ENST00000590556 NRAPQ86VF7 1730 aa26■■□□□ 1.75
DDX39A-214ENST00000590556 POLKQ9UBT6 870 aa26■■□□□ 1.75
DDX39A-214ENST00000590556 TRPC5Q9UL62 973 aaPredicted RBP26■■□□□ 1.75
DDX39A-214ENST00000590556 EMILIN1Q9Y6C2 1016 aa26■■□□□ 1.75
DDX39A-214ENST00000590556 RTL1A6NKG5 1358 aa25.99■■□□□ 1.75
DDX39A-214ENST00000590556 PPM1GO15355 546 aaPredicted RBP25.99■■□□□ 1.75
DDX39A-214ENST00000590556 HOXC9P31274 260 aa25.99■■□□□ 1.75
DDX39A-214ENST00000590556 COL5A2P05997 1499 aaPredicted RBP25.98■■□□□ 1.75
DDX39A-214ENST00000590556 KIF24Q5T7B8 1368 aa25.97■■□□□ 1.75
DDX39A-214ENST00000590556 VPS72Q15906 364 aa25.97■■□□□ 1.75
DDX39A-214ENST00000590556 POTEAQ6S8J7 498 aa25.97■■□□□ 1.75
DDX39A-214ENST00000590556 ATRNO75882 1429 aa25.97■■□□□ 1.75
DDX39A-214ENST00000590556 BLMP54132 1417 aaPredicted RBP25.97■■□□□ 1.75
DDX39A-214ENST00000590556 CCDC9Q9Y3X0 531 aaKnown RBP25.96■■□□□ 1.75
DDX39A-214ENST00000590556 PEAK1Q9H792 1746 aa25.96■■□□□ 1.75
DDX39A-214ENST00000590556 FLT4P35916 1363 aa25.95■■□□□ 1.75
DDX39A-214ENST00000590556 CSB-PGBD3P0DP91 1061 aa25.94■■□□□ 1.74
DDX39A-214ENST00000590556 LARP1Q6PKG0 1096 aaKnown RBP25.94■■□□□ 1.74
DDX39A-214ENST00000590556 ANKRD24Q8TF21 1146 aa25.94■■□□□ 1.74
DDX39A-214ENST00000590556 HSP90AB2PQ58FF8 381 aa25.93■■□□□ 1.74
DDX39A-214ENST00000590556 LTV1Q96GA3 475 aaPredicted RBP25.93■■□□□ 1.74
DDX39A-214ENST00000590556 WDR17Q8IZU2 1322 aa25.92■■□□□ 1.74
DDX39A-214ENST00000590556 GJD4Q96KN9 370 aaPredicted RBP25.92■■□□□ 1.74
DDX39A-214ENST00000590556 INSRP06213 1382 aa25.92■■□□□ 1.74
DDX39A-214ENST00000590556 ERBB3P21860 1342 aa25.91■■□□□ 1.74
DDX39A-214ENST00000590556 SMG6Q86US8 1419 aaKnown RBP25.91■■□□□ 1.74
DDX39A-214ENST00000590556 PARD3Q8TEW0 1356 aa25.91■■□□□ 1.74
DDX39A-214ENST00000590556 SPATA31A5Q5VU36 1347 aa25.9■■□□□ 1.74
DDX39A-214ENST00000590556 SPATA31A7Q8IWB4 1347 aa25.9■■□□□ 1.74
DDX39A-214ENST00000590556 RXRBP28702 533 aa25.9■■□□□ 1.74
DDX39A-214ENST00000590556 MTHFSP49914 203 aa25.9■■□□□ 1.74
DDX39A-214ENST00000590556 RBM6P78332 1123 aaKnown RBP25.9■■□□□ 1.74
DDX39A-214ENST00000590556 RALBP1Q15311 655 aa25.9■■□□□ 1.74
DDX39A-214ENST00000590556 TOM1L2Q6ZVM7 507 aa25.9■■□□□ 1.74
DDX39A-214ENST00000590556 CRB1P82279 1406 aa25.89■■□□□ 1.74
DDX39A-214ENST00000590556 PPP2R1AP30153 589 aa25.88■■□□□ 1.73
DDX39A-214ENST00000590556 SPATA31A1Q5TZJ5 1347 aa25.88■■□□□ 1.73
DDX39A-214ENST00000590556 CDK12Q9NYV4 1490 aaPredicted RBP25.87■■□□□ 1.73
DDX39A-214ENST00000590556 NLRP2Q9NX02 1062 aa25.87■■□□□ 1.73
DDX39A-214ENST00000590556 USP35Q9P2H5 1018 aa25.87■■□□□ 1.73
DDX39A-214ENST00000590556 CARD10Q9BWT7 1032 aa25.85■■□□□ 1.73
DDX39A-214ENST00000590556 GLI3P10071 1580 aa25.85■■□□□ 1.73
DDX39A-214ENST00000590556 TCP11L2Q8N4U5 519 aa25.83■■□□□ 1.73
DDX39A-214ENST00000590556 FAM208AQ9UK61 1670 aaKnown RBP25.83■■□□□ 1.73
DDX39A-214ENST00000590556 PRKRIP1Q9H875 184 aaPredicted RBP25.82■■□□□ 1.72
DDX39A-214ENST00000590556 EIF4A2Q14240 407 aaKnown RBP25.81■■□□□ 1.72
DDX39A-214ENST00000590556 FAM98CQ17RN3 349 aaKnown RBP25.81■■□□□ 1.72
DDX39A-214ENST00000590556 THRAP3Q9Y2W1 955 aaKnown RBP25.81■■□□□ 1.72
DDX39A-214ENST00000590556 RGPD2P0DJD1 1756 aa25.79■■□□□ 1.72
DDX39A-214ENST00000590556 NBPF6Q5VWK0 638 aa25.79■■□□□ 1.72
DDX39A-214ENST00000590556 BARGINQ6ZT62 677 aa25.79■■□□□ 1.72
DDX39A-214ENST00000590556 NBPF4Q96M43 638 aa25.79■■□□□ 1.72
DDX39A-214ENST00000590556 CFAP53Q96M91 514 aa25.79■■□□□ 1.72
DDX39A-214ENST00000590556 MYBBP1AQ9BQG0 1328 aaKnown RBP25.78■■□□□ 1.72
DDX39A-214ENST00000590556 ANP32CO43423 234 aa25.77■■□□□ 1.72
DDX39A-214ENST00000590556 ONECUT3O60422 494 aaPredicted RBP25.77■■□□□ 1.72
DDX39A-214ENST00000590556 A0A0G2JS52 829 aa25.76■■□□□ 1.71
DDX39A-214ENST00000590556 MYT1Q01538 1121 aa25.76■■□□□ 1.71
DDX39A-214ENST00000590556 DIAPH1O60610 1272 aaKnown RBP25.75■■□□□ 1.71
DDX39A-214ENST00000590556 IL13P35225 146 aa25.75■■□□□ 1.71
DDX39A-214ENST00000590556 USHBP1Q8N6Y0 703 aa25.75■■□□□ 1.71
DDX39A-214ENST00000590556 EYA1Q99502 592 aa25.75■■□□□ 1.71
DDX39A-214ENST00000590556 SEPT12Q8IYM1 358 aa25.74■■□□□ 1.71
DDX39A-214ENST00000590556 CDCA7Q9BWT1 371 aaPredicted RBP25.73■■□□□ 1.71
DDX39A-214ENST00000590556 COL3A1P02461 1466 aaPredicted RBP25.72■■□□□ 1.71
DDX39A-214ENST00000590556 RGS12O14924 1447 aa25.72■■□□□ 1.71
DDX39A-214ENST00000590556 IL2RBP14784 551 aa25.71■■□□□ 1.71
DDX39A-214ENST00000590556 THSD7AQ9UPZ6 1657 aa25.71■■□□□ 1.71
DDX39A-214ENST00000590556 WNK3Q9BYP7 1800 aa25.7■■□□□ 1.71
DDX39A-214ENST00000590556 IGSF1Q8N6C5 1336 aa25.7■■□□□ 1.71
DDX39A-214ENST00000590556 DISP2A7MBM2 1401 aa25.69■■□□□ 1.7
DDX39A-214ENST00000590556 U2SURPO15042 1029 aaKnown RBP25.67■■□□□ 1.7
DDX39A-214ENST00000590556 NCAPD2Q15021 1401 aa25.67■■□□□ 1.7
DDX39A-214ENST00000590556 ILDR2Q71H61 639 aa25.67■■□□□ 1.7
DDX39A-214ENST00000590556 RAPGEF4Q8WZA2 1011 aa25.67■■□□□ 1.7
DDX39A-214ENST00000590556 NUDCQ9Y266 331 aa25.67■■□□□ 1.7
DDX39A-214ENST00000590556 RGPD1P0DJD0 1748 aa25.66■■□□□ 1.7
DDX39A-214ENST00000590556 PARP4Q9UKK3 1724 aaKnown RBP25.66■■□□□ 1.7
DDX39A-214ENST00000590556 TATP17735 454 aaPredicted RBP25.65■■□□□ 1.7
DDX39A-214ENST00000590556 SULT6B1Q6IMI4 303 aa25.65■■□□□ 1.7
DDX39A-214ENST00000590556 BRWD3Q6RI45 1802 aa25.65■■□□□ 1.7
DDX39A-214ENST00000590556 EXOC5O00471 708 aa25.64■■□□□ 1.7
DDX39A-214ENST00000590556 DDB1Q16531 1140 aa25.64■■□□□ 1.7
DDX39A-214ENST00000590556 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
DDX39A-214ENST00000590556 MEGF6O75095 1541 aa25.63■■□□□ 1.69
DDX39A-214ENST00000590556 PDE3BQ13370 1112 aa25.63■■□□□ 1.69
DDX39A-214ENST00000590556 AEBP1Q8IUX7 1158 aa25.63■■□□□ 1.69
DDX39A-214ENST00000590556 KRT27Q7Z3Y8 459 aa25.62■■□□□ 1.69
DDX39A-214ENST00000590556 HMOX1P09601 288 aa25.61■■□□□ 1.69
DDX39A-214ENST00000590556 LRRC37A3O60309 1634 aa25.61■■□□□ 1.69
DDX39A-214ENST00000590556 OVOS2A0A0G2JMS6 1433 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms