RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 MBD3O95983 291 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 SLC20A2Q08357 652 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 RUNDC1Q96C34 613 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 PYCARDQ9ULZ3 195 aa9.4□□□□□ -0.9
NEDD4L-229ENST00000590506 CFAP74Q9C0B2 1584 aa9.4□□□□□ -0.91
NEDD4L-229ENST00000590506 PLB1Q6P1J6 1458 aa9.4□□□□□ -0.91
NEDD4L-229ENST00000590506 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.91
NEDD4L-229ENST00000590506 TERF2Q15554 542 aa9.4□□□□□ -0.91
NEDD4L-229ENST00000590506 WDR63Q8IWG1 891 aa9.4□□□□□ -0.91
NEDD4L-229ENST00000590506 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.91
NEDD4L-229ENST00000590506 SYNMO15061 1565 aa9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 PLA2R1Q13018 1463 aa9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 TARBP1Q13395 1621 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 NAA30Q147X3 362 aaPredicted RBP9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 TSR2Q969E8 191 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 MYO5CQ9NQX4 1742 aa9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 PBRM1Q86U86 1689 aa9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 SECISBP2LQ93073 1101 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 DDX41Q9UJV9 622 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-229ENST00000590506 VGFO15240 615 aaPredicted RBP9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 ZBTB40Q9NUA8 1239 aa9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 NOB1Q9ULX3 412 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 NPC1L1Q9UHC9 1359 aa9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 CDC45O75419 566 aa9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 TEX2Q8IWB9 1127 aa9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 KIAA1524Q8TCG1 905 aa9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 EIF2AK4Q9P2K8 1649 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 CDC42BPAQ5VT25 1732 aa9.38□□□□□ -0.91
NEDD4L-229ENST00000590506 NUP160Q12769 1436 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 TULP2O00295 520 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 ATF7IPQ6VMQ6 1270 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 SSH1Q8WYL5 1049 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 KCNF1Q9H3M0 494 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 CALCOCO1Q9P1Z2 691 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 CCDC141Q6ZP82 1450 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 EXOSC9Q06265 439 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 UVSSAQ2YD98 709 aa9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 SYAP1Q96A49 352 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 MORC2Q9Y6X9 1032 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-229ENST00000590506 MYOM1P52179 1685 aa9.36□□□□□ -0.91
NEDD4L-229ENST00000590506 GADD45BO75293 160 aaPredicted RBP9.36□□□□□ -0.91
NEDD4L-229ENST00000590506 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
NEDD4L-229ENST00000590506 HCLS1P14317 486 aaPredicted RBP9.36□□□□□ -0.91
NEDD4L-229ENST00000590506 SPC24Q8NBT2 197 aa9.36□□□□□ -0.91
NEDD4L-229ENST00000590506 KIF18AQ8NI77 898 aa9.36□□□□□ -0.91
NEDD4L-229ENST00000590506 IQSEC2Q5JU85 1478 aa9.35□□□□□ -0.91
NEDD4L-229ENST00000590506 SMARCA5O60264 1052 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-229ENST00000590506 POLR3AO14802 1390 aaPredicted RBP9.35□□□□□ -0.91
NEDD4L-229ENST00000590506 KRT222Q8N1A0 295 aa9.35□□□□□ -0.91
NEDD4L-229ENST00000590506 FAM184AQ8NB25 1140 aa9.35□□□□□ -0.91
NEDD4L-229ENST00000590506 CHMP4CQ96CF2 233 aa9.35□□□□□ -0.91
NEDD4L-229ENST00000590506 USP26Q9BXU7 913 aa9.35□□□□□ -0.91
NEDD4L-229ENST00000590506 C1orf115Q9H7X2 142 aa9.35□□□□□ -0.91
NEDD4L-229ENST00000590506 ST18O60284 1047 aa9.34□□□□□ -0.91
NEDD4L-229ENST00000590506 PHF14O94880 888 aa9.34□□□□□ -0.91
NEDD4L-229ENST00000590506 CARD14Q9BXL6 1004 aa9.34□□□□□ -0.91
NEDD4L-229ENST00000590506 ST7Q9NRC1 585 aa9.34□□□□□ -0.91
NEDD4L-229ENST00000590506 SHPRHQ149N8 1683 aa9.34□□□□□ -0.91
NEDD4L-229ENST00000590506 KDM4AO75164 1064 aa9.34□□□□□ -0.91
NEDD4L-229ENST00000590506 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-229ENST00000590506 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
NEDD4L-229ENST00000590506 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-229ENST00000590506 KANK1Q14678 1352 aa9.33□□□□□ -0.92
NEDD4L-229ENST00000590506 RNF17Q9BXT8 1623 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-229ENST00000590506 AP5Z1O43299 807 aa9.33□□□□□ -0.92
NEDD4L-229ENST00000590506 SYCP1Q15431 976 aa9.33□□□□□ -0.92
NEDD4L-229ENST00000590506 C16orf45Q96MC5 204 aaPredicted RBP9.33□□□□□ -0.92
NEDD4L-229ENST00000590506 FEZ2Q9UHY8 353 aaPredicted RBP9.33□□□□□ -0.92
NEDD4L-229ENST00000590506 ANKRD36BQ8N2N9 1353 aa9.33□□□□□ -0.92
NEDD4L-229ENST00000590506 MAGI1Q96QZ7 1491 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 SMTNL1A8MU46 457 aa9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 CCDC27Q2M243 656 aa9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 USP48Q86UV5 1035 aa9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 ATF5Q9Y2D1 282 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 PPIP5K1Q6PFW1 1433 aa9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 BRD1O95696 1058 aa9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 HNRNPH2P55795 449 aaKnown RBP9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 GCC1Q96CN9 775 aa9.32□□□□□ -0.92
NEDD4L-229ENST00000590506 IQGAP1P46940 1657 aa9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 MORC1Q86VD1 984 aa9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 TSPYL1Q9H0U9 437 aa9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 PTGS1P23219 599 aa9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 TCHHQ07283 1943 aa9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 NOL8Q76FK4 1167 aaKnown RBP9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 SCAF11Q99590 1463 aaKnown RBP9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 V9GYY5 206 aaPredicted RBP9.31□□□□□ -0.92
NEDD4L-229ENST00000590506 CEP152O94986 1710 aa9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 MYCNP04198 464 aaPredicted RBP9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 CT47B1P0C2W7 299 aaPredicted RBP9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 TNNT1P13805 278 aa9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 CCDC183Q5T5S1 534 aa9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 ARHGEF5Q12774 1597 aa9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 U2SURPO15042 1029 aaKnown RBP9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 TNNT3P45378 269 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms