RNA–Protein interactions for RNA: ENST00000590494.1

TMC6-215, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-215ENST00000590494 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
TMC6-215ENST00000590494 NLGN2Q8NFZ4 835 aa16.67■□□□□ 0.26
TMC6-215ENST00000590494 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
TMC6-215ENST00000590494 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
TMC6-215ENST00000590494 COL24A1Q17RW2 1714 aa16.65■□□□□ 0.26
TMC6-215ENST00000590494 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
TMC6-215ENST00000590494 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
TMC6-215ENST00000590494 GPRASP1Q5JY77 1395 aa16.64■□□□□ 0.26
TMC6-215ENST00000590494 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.26
TMC6-215ENST00000590494 TXNRD1Q16881 649 aa16.64■□□□□ 0.25
TMC6-215ENST00000590494 KIAA0232Q92628 1395 aa16.64■□□□□ 0.25
TMC6-215ENST00000590494 TOPAZ1Q8N9V7 1692 aa16.63■□□□□ 0.25
TMC6-215ENST00000590494 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
TMC6-215ENST00000590494 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
TMC6-215ENST00000590494 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
TMC6-215ENST00000590494 POGKQ9P215 609 aa16.63■□□□□ 0.25
TMC6-215ENST00000590494 ATP7BP35670 1465 aa16.62■□□□□ 0.25
TMC6-215ENST00000590494 PAPPAQ13219 1627 aa16.6■□□□□ 0.25
TMC6-215ENST00000590494 CARD11Q9BXL7 1154 aa16.6■□□□□ 0.25
TMC6-215ENST00000590494 EIF3AQ14152 1382 aaKnown RBP16.6■□□□□ 0.25
TMC6-215ENST00000590494 SAFB2Q14151 953 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMC6-215ENST00000590494 TNS2Q63HR2 1409 aa16.59■□□□□ 0.25
TMC6-215ENST00000590494 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
TMC6-215ENST00000590494 HTRA3P83110 453 aa16.58■□□□□ 0.24
TMC6-215ENST00000590494 LARP1Q6PKG0 1096 aaKnown RBP16.58■□□□□ 0.24
TMC6-215ENST00000590494 THRAP3Q9Y2W1 955 aaKnown RBP16.58■□□□□ 0.24
TMC6-215ENST00000590494 QRICH2Q9H0J4 1663 aa16.57■□□□□ 0.24
TMC6-215ENST00000590494 PHRF1Q9P1Y6 1649 aaKnown RBP16.57■□□□□ 0.24
TMC6-215ENST00000590494 TOMM70O94826 608 aa16.57■□□□□ 0.24
TMC6-215ENST00000590494 POLD1P28340 1107 aa16.57■□□□□ 0.24
TMC6-215ENST00000590494 EVA1CP58658 441 aa16.57■□□□□ 0.24
TMC6-215ENST00000590494 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
TMC6-215ENST00000590494 PMFBP1Q8TBY8 1022 aa16.56■□□□□ 0.24
TMC6-215ENST00000590494 PCNTO95613 3336 aa16.55■□□□□ 0.24
TMC6-215ENST00000590494 MINK1Q8N4C8 1332 aaPredicted RBP16.54■□□□□ 0.24
TMC6-215ENST00000590494 BCL9O00512 1426 aa16.53■□□□□ 0.24
TMC6-215ENST00000590494 LMO7Q8WWI1 1683 aa16.53■□□□□ 0.24
TMC6-215ENST00000590494 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
TMC6-215ENST00000590494 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
TMC6-215ENST00000590494 TULP4Q9NRJ4 1543 aa16.52■□□□□ 0.24
TMC6-215ENST00000590494 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.24
TMC6-215ENST00000590494 AKAP12Q02952 1782 aa16.51■□□□□ 0.23
TMC6-215ENST00000590494 HSPA1AP0DMV8 641 aaKnown RBP16.51■□□□□ 0.23
TMC6-215ENST00000590494 HSPA1BP0DMV9 641 aaKnown RBP16.51■□□□□ 0.23
TMC6-215ENST00000590494 ZC3H6P61129 1189 aaKnown RBP16.51■□□□□ 0.23
TMC6-215ENST00000590494 FAM161AQ3B820 660 aa16.51■□□□□ 0.23
TMC6-215ENST00000590494 ANKARQ7Z5J8 1434 aa16.51■□□□□ 0.23
TMC6-215ENST00000590494 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
TMC6-215ENST00000590494 USP47Q96K76 1375 aa16.5■□□□□ 0.23
TMC6-215ENST00000590494 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
TMC6-215ENST00000590494 DDB1Q16531 1140 aa16.49■□□□□ 0.23
TMC6-215ENST00000590494 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
TMC6-215ENST00000590494 MARCH10Q8NA82 808 aaPredicted RBP16.47■□□□□ 0.23
TMC6-215ENST00000590494 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
TMC6-215ENST00000590494 ITSN1Q15811 1721 aa16.45■□□□□ 0.22
TMC6-215ENST00000590494 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
TMC6-215ENST00000590494 ST20-MTHFSA0A0A6YYL1 179 aa16.45■□□□□ 0.22
TMC6-215ENST00000590494 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
TMC6-215ENST00000590494 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
TMC6-215ENST00000590494 COL5A2P05997 1499 aaPredicted RBP16.44■□□□□ 0.22
TMC6-215ENST00000590494 RBM46Q8TBY0 533 aaKnown RBP16.44■□□□□ 0.22
TMC6-215ENST00000590494 CRB1P82279 1406 aa16.44■□□□□ 0.22
TMC6-215ENST00000590494 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
TMC6-215ENST00000590494 SRPK2P78362 688 aaKnown RBP16.43■□□□□ 0.22
TMC6-215ENST00000590494 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
TMC6-215ENST00000590494 NHSQ6T4R5 1651 aa16.42■□□□□ 0.22
TMC6-215ENST00000590494 PRR36Q9H6K5 1346 aa16.42■□□□□ 0.22
TMC6-215ENST00000590494 EIF4G2P78344 907 aaKnown RBP eCLIP16.41■□□□□ 0.22
TMC6-215ENST00000590494 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
TMC6-215ENST00000590494 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
TMC6-215ENST00000590494 CPDO75976 1380 aa16.4■□□□□ 0.22
TMC6-215ENST00000590494 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
TMC6-215ENST00000590494 TESK2Q96S53 571 aa16.4■□□□□ 0.22
TMC6-215ENST00000590494 CABP2Q9NPB3 220 aa16.4■□□□□ 0.22
TMC6-215ENST00000590494 FSTL1Q12841 308 aa16.39■□□□□ 0.21
TMC6-215ENST00000590494 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.21
TMC6-215ENST00000590494 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
TMC6-215ENST00000590494 LRRC4BQ9NT99 713 aa16.38■□□□□ 0.21
TMC6-215ENST00000590494 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
TMC6-215ENST00000590494 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
TMC6-215ENST00000590494 TMF1P82094 1093 aa16.36■□□□□ 0.21
TMC6-215ENST00000590494 CICQ96RK0 1608 aaPredicted RBP16.36■□□□□ 0.21
TMC6-215ENST00000590494 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
TMC6-215ENST00000590494 BTAF1O14981 1849 aa16.35■□□□□ 0.21
TMC6-215ENST00000590494 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
TMC6-215ENST00000590494 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
TMC6-215ENST00000590494 CD2APQ9Y5K6 639 aa16.35■□□□□ 0.21
TMC6-215ENST00000590494 BRD4O60885 1362 aaPredicted RBP16.35■□□□□ 0.21
TMC6-215ENST00000590494 CDCA8Q53HL2 280 aa16.34■□□□□ 0.21
TMC6-215ENST00000590494 NGDNQ8NEJ9 315 aaKnown RBP16.34■□□□□ 0.21
TMC6-215ENST00000590494 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
TMC6-215ENST00000590494 MLLT1Q03111 559 aaPredicted RBP16.33■□□□□ 0.2
TMC6-215ENST00000590494 POLR3AO14802 1390 aaPredicted RBP16.32■□□□□ 0.2
TMC6-215ENST00000590494 C16orf71Q8IYS4 520 aaPredicted RBP16.32■□□□□ 0.2
TMC6-215ENST00000590494 CDCA7Q9BWT1 371 aaPredicted RBP16.31■□□□□ 0.2
TMC6-215ENST00000590494 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
TMC6-215ENST00000590494 ACEP12821 1306 aa16.3■□□□□ 0.2
TMC6-215ENST00000590494 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
TMC6-215ENST00000590494 USP19O94966 1318 aa16.29■□□□□ 0.2
TMC6-215ENST00000590494 TOM1L2Q6ZVM7 507 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms