RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
ZNF397-208ENST00000590470 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
ZNF397-208ENST00000590470 EIF4A2Q14240 407 aaKnown RBP12.54□□□□□ -0.4
ZNF397-208ENST00000590470 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
ZNF397-208ENST00000590470 KCNH5Q8NCM2 988 aa12.54□□□□□ -0.4
ZNF397-208ENST00000590470 COL22A1Q8NFW1 1626 aaPredicted RBP12.54□□□□□ -0.4
ZNF397-208ENST00000590470 HSPA1LP34931 641 aa12.53□□□□□ -0.4
ZNF397-208ENST00000590470 IL13P35225 146 aa12.53□□□□□ -0.4
ZNF397-208ENST00000590470 ARHGEF25Q86VW2 580 aa12.53□□□□□ -0.4
ZNF397-208ENST00000590470 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
ZNF397-208ENST00000590470 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
ZNF397-208ENST00000590470 KIAA0232Q92628 1395 aa12.53□□□□□ -0.4
ZNF397-208ENST00000590470 HMOX1P09601 288 aa12.52□□□□□ -0.41
ZNF397-208ENST00000590470 U2AF1L5P0DN76 240 aaPredicted RBP12.52□□□□□ -0.41
ZNF397-208ENST00000590470 U2AF1Q01081 240 aaKnown RBP eCLIP12.52□□□□□ -0.41
ZNF397-208ENST00000590470 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.41
ZNF397-208ENST00000590470 FLT4P35916 1363 aa12.52□□□□□ -0.41
ZNF397-208ENST00000590470 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
ZNF397-208ENST00000590470 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
ZNF397-208ENST00000590470 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
ZNF397-208ENST00000590470 IP6K1Q92551 441 aa12.51□□□□□ -0.41
ZNF397-208ENST00000590470 AEBP1Q8IUX7 1158 aa12.5□□□□□ -0.41
ZNF397-208ENST00000590470 INSRP06213 1382 aa12.49□□□□□ -0.41
ZNF397-208ENST00000590470 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
ZNF397-208ENST00000590470 LMO7Q8WWI1 1683 aa12.48□□□□□ -0.41
ZNF397-208ENST00000590470 CAMTA1Q9Y6Y1 1673 aa12.48□□□□□ -0.41
ZNF397-208ENST00000590470 FAM83GA6ND36 823 aa12.48□□□□□ -0.41
ZNF397-208ENST00000590470 ANKRD24Q8TF21 1146 aa12.48□□□□□ -0.41
ZNF397-208ENST00000590470 NUDCQ9Y266 331 aa12.48□□□□□ -0.41
ZNF397-208ENST00000590470 RRP7AQ9Y3A4 280 aaKnown RBP12.48□□□□□ -0.41
ZNF397-208ENST00000590470 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
ZNF397-208ENST00000590470 BLMP54132 1417 aaPredicted RBP12.47□□□□□ -0.41
ZNF397-208ENST00000590470 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
ZNF397-208ENST00000590470 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
ZNF397-208ENST00000590470 EYA1Q99502 592 aa12.47□□□□□ -0.41
ZNF397-208ENST00000590470 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.41
ZNF397-208ENST00000590470 NBPF4Q96M43 638 aa12.46□□□□□ -0.41
ZNF397-208ENST00000590470 STRN4Q9NRL3 753 aa12.46□□□□□ -0.41
ZNF397-208ENST00000590470 COL14A1Q05707 1796 aaKnown RBP12.46□□□□□ -0.42
ZNF397-208ENST00000590470 CPDO75976 1380 aa12.45□□□□□ -0.42
ZNF397-208ENST00000590470 LRP6O75581 1613 aa12.45□□□□□ -0.42
ZNF397-208ENST00000590470 APAF1O14727 1248 aa12.45□□□□□ -0.42
ZNF397-208ENST00000590470 PRKAR2BP31323 418 aa12.45□□□□□ -0.42
ZNF397-208ENST00000590470 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
ZNF397-208ENST00000590470 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
ZNF397-208ENST00000590470 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
ZNF397-208ENST00000590470 DLG5Q8TDM6 1919 aa12.45□□□□□ -0.42
ZNF397-208ENST00000590470 KIF24Q5T7B8 1368 aa12.44□□□□□ -0.42
ZNF397-208ENST00000590470 JCADQ9P266 1359 aa12.44□□□□□ -0.42
ZNF397-208ENST00000590470 CSB-PGBD3P0DP91 1061 aa12.44□□□□□ -0.42
ZNF397-208ENST00000590470 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
ZNF397-208ENST00000590470 BTG4Q9NY30 223 aa12.44□□□□□ -0.42
ZNF397-208ENST00000590470 FAM208AQ9UK61 1670 aaKnown RBP12.43□□□□□ -0.42
ZNF397-208ENST00000590470 RUNDC1Q96C34 613 aa12.43□□□□□ -0.42
ZNF397-208ENST00000590470 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
ZNF397-208ENST00000590470 ERBB3P21860 1342 aa12.42□□□□□ -0.42
ZNF397-208ENST00000590470 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
ZNF397-208ENST00000590470 COL5A2P05997 1499 aaPredicted RBP12.42□□□□□ -0.42
ZNF397-208ENST00000590470 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
ZNF397-208ENST00000590470 TCP11L2Q8N4U5 519 aa12.42□□□□□ -0.42
ZNF397-208ENST00000590470 NRAPQ86VF7 1730 aa12.42□□□□□ -0.42
ZNF397-208ENST00000590470 EVA1CP58658 441 aa12.41□□□□□ -0.42
ZNF397-208ENST00000590470 C8orf37Q96NL8 207 aa12.41□□□□□ -0.42
ZNF397-208ENST00000590470 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
ZNF397-208ENST00000590470 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
ZNF397-208ENST00000590470 FCHSD2O94868 740 aa12.4□□□□□ -0.42
ZNF397-208ENST00000590470 TOM1L2Q6ZVM7 507 aa12.4□□□□□ -0.42
ZNF397-208ENST00000590470 ABCC6O95255 1503 aa12.4□□□□□ -0.42
ZNF397-208ENST00000590470 TMPOP42166 694 aaKnown RBP12.38□□□□□ -0.43
ZNF397-208ENST00000590470 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
ZNF397-208ENST00000590470 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
ZNF397-208ENST00000590470 MTHFSDQ2M296 383 aaKnown RBP12.37□□□□□ -0.43
ZNF397-208ENST00000590470 CDCA7LQ96GN5 454 aa12.37□□□□□ -0.43
ZNF397-208ENST00000590470 NGLY1Q96IV0 654 aa12.37□□□□□ -0.43
ZNF397-208ENST00000590470 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
ZNF397-208ENST00000590470 KDRP35968 1356 aa12.37□□□□□ -0.43
ZNF397-208ENST00000590470 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
ZNF397-208ENST00000590470 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
ZNF397-208ENST00000590470 MEGF6O75095 1541 aa12.37□□□□□ -0.43
ZNF397-208ENST00000590470 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
ZNF397-208ENST00000590470 RIPK4P57078 832 aa12.36□□□□□ -0.43
ZNF397-208ENST00000590470 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
ZNF397-208ENST00000590470 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
ZNF397-208ENST00000590470 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
ZNF397-208ENST00000590470 WNK3Q9BYP7 1800 aa12.35□□□□□ -0.43
ZNF397-208ENST00000590470 PNNQ9H307 717 aaKnown RBP12.35□□□□□ -0.43
ZNF397-208ENST00000590470 TRIM35Q9UPQ4 493 aa12.35□□□□□ -0.43
ZNF397-208ENST00000590470 SLIT2O94813 1529 aa12.35□□□□□ -0.43
ZNF397-208ENST00000590470 NCAPD2Q15021 1401 aa12.35□□□□□ -0.43
ZNF397-208ENST00000590470 NEFMP07197 916 aa12.34□□□□□ -0.43
ZNF397-208ENST00000590470 FBXO41Q8TF61 875 aa12.34□□□□□ -0.43
ZNF397-208ENST00000590470 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
ZNF397-208ENST00000590470 CCDC9Q9Y3X0 531 aaKnown RBP12.34□□□□□ -0.43
ZNF397-208ENST00000590470 CRB1P82279 1406 aa12.34□□□□□ -0.43
ZNF397-208ENST00000590470 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
ZNF397-208ENST00000590470 MCM10Q7L590 875 aa12.33□□□□□ -0.44
ZNF397-208ENST00000590470 WWC1Q8IX03 1113 aa12.33□□□□□ -0.44
ZNF397-208ENST00000590470 SHANK3Q9BYB0 1731 aa12.33□□□□□ -0.44
ZNF397-208ENST00000590470 AFF2P51816 1311 aa12.33□□□□□ -0.44
ZNF397-208ENST00000590470 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms