RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 AXIN2Q9Y2T1 843 aa28.93■■■□□ 2.22
CIRBP-226ENST00000590171 TMF1P82094 1093 aa28.91■■■□□ 2.22
CIRBP-226ENST00000590171 SF3B2Q13435 895 aaKnown RBP28.9■■■□□ 2.22
CIRBP-226ENST00000590171 DEFB132Q7Z7B7 95 aa28.9■■■□□ 2.22
CIRBP-226ENST00000590171 CCER1Q8TC90 406 aaPredicted RBP28.9■■■□□ 2.22
CIRBP-226ENST00000590171 THRAP3Q9Y2W1 955 aaKnown RBP28.9■■■□□ 2.22
CIRBP-226ENST00000590171 OVOS2A0A0J9YW53 1432 aa28.87■■■□□ 2.21
CIRBP-226ENST00000590171 OVOS2Q6IE36 1432 aa28.87■■■□□ 2.21
CIRBP-226ENST00000590171 WDR17Q8IZU2 1322 aa28.87■■■□□ 2.21
CIRBP-226ENST00000590171 TOM1L2Q6ZVM7 507 aa28.86■■■□□ 2.21
CIRBP-226ENST00000590171 ANKRD36BQ8N2N9 1353 aa28.85■■■□□ 2.21
CIRBP-226ENST00000590171 ABCC6O95255 1503 aa28.84■■■□□ 2.21
CIRBP-226ENST00000590171 PARP4Q9UKK3 1724 aaKnown RBP28.83■■■□□ 2.21
CIRBP-226ENST00000590171 PDE3BQ13370 1112 aa28.82■■■□□ 2.2
CIRBP-226ENST00000590171 RGPD5Q99666 1765 aa28.82■■■□□ 2.2
CIRBP-226ENST00000590171 RGPD1P0DJD0 1748 aa28.81■■■□□ 2.2
CIRBP-226ENST00000590171 FAM196AQ6ZSG2 479 aa28.8■■■□□ 2.2
CIRBP-226ENST00000590171 CSB-PGBD3P0DP91 1061 aa28.79■■■□□ 2.2
CIRBP-226ENST00000590171 BAG6P46379 1132 aa28.79■■■□□ 2.2
CIRBP-226ENST00000590171 CDCA8Q53HL2 280 aa28.79■■■□□ 2.2
CIRBP-226ENST00000590171 TNS1Q9HBL0 1735 aaKnown RBP28.77■■■□□ 2.2
CIRBP-226ENST00000590171 LRRC37A3O60309 1634 aa28.77■■■□□ 2.2
CIRBP-226ENST00000590171 LTN1O94822 1766 aa28.77■■■□□ 2.2
CIRBP-226ENST00000590171 CARD10Q9BWT7 1032 aa28.76■■■□□ 2.19
CIRBP-226ENST00000590171 WNK3Q9BYP7 1800 aa28.75■■■□□ 2.19
CIRBP-226ENST00000590171 ERBB3P21860 1342 aa28.74■■■□□ 2.19
CIRBP-226ENST00000590171 TRIM37O94972 964 aa28.74■■■□□ 2.19
CIRBP-226ENST00000590171 COG3Q96JB2 828 aa28.74■■■□□ 2.19
CIRBP-226ENST00000590171 DISP2A7MBM2 1401 aa28.74■■■□□ 2.19
CIRBP-226ENST00000590171 EN1Q05925 392 aaPredicted RBP28.73■■■□□ 2.19
CIRBP-226ENST00000590171 MYOM1P52179 1685 aa28.73■■■□□ 2.19
CIRBP-226ENST00000590171 DDB1Q16531 1140 aa28.72■■■□□ 2.19
CIRBP-226ENST00000590171 CCDC7Q96M83 1385 aa28.71■■■□□ 2.19
CIRBP-226ENST00000590171 CDCA7Q9BWT1 371 aaPredicted RBP28.7■■■□□ 2.18
CIRBP-226ENST00000590171 FYB1O15117 783 aa28.69■■■□□ 2.18
CIRBP-226ENST00000590171 PEAK1Q9H792 1746 aa28.69■■■□□ 2.18
CIRBP-226ENST00000590171 OVOS2A0A0G2JMS6 1433 aa28.69■■■□□ 2.18
CIRBP-226ENST00000590171 ANKRD24Q8TF21 1146 aa28.68■■■□□ 2.18
CIRBP-226ENST00000590171 FBLN1P23142 703 aa28.67■■■□□ 2.18
CIRBP-226ENST00000590171 GGNBP2Q9H3C7 697 aa28.67■■■□□ 2.18
CIRBP-226ENST00000590171 MAP3K19Q56UN5 1328 aa28.67■■■□□ 2.18
CIRBP-226ENST00000590171 IP6K1Q92551 441 aa28.66■■■□□ 2.18
CIRBP-226ENST00000590171 NLRP2Q9NX02 1062 aa28.66■■■□□ 2.18
CIRBP-226ENST00000590171 APBA3O96018 575 aa28.65■■■□□ 2.18
CIRBP-226ENST00000590171 EIF4G2P78344 907 aaKnown RBP eCLIP28.65■■■□□ 2.18
CIRBP-226ENST00000590171 EZH2Q15910 746 aaKnown RBP28.65■■■□□ 2.18
CIRBP-226ENST00000590171 HSPA5P11021 654 aaKnown RBP28.64■■■□□ 2.18
CIRBP-226ENST00000590171 CARD14Q9BXL6 1004 aa28.64■■■□□ 2.18
CIRBP-226ENST00000590171 C11orf95C9JLR9 678 aaPredicted RBP28.63■■■□□ 2.17
CIRBP-226ENST00000590171 MARCH10Q8NA82 808 aaPredicted RBP28.63■■■□□ 2.17
CIRBP-226ENST00000590171 CAMKK2Q96RR4 588 aa28.63■■■□□ 2.17
CIRBP-226ENST00000590171 NSD3Q9BZ95 1437 aa28.62■■■□□ 2.17
CIRBP-226ENST00000590171 KIF20BQ96Q89 1820 aa28.61■■■□□ 2.17
CIRBP-226ENST00000590171 TNS2Q63HR2 1409 aa28.6■■■□□ 2.17
CIRBP-226ENST00000590171 HOXC9P31274 260 aa28.6■■■□□ 2.17
CIRBP-226ENST00000590171 EXOC5O00471 708 aa28.59■■■□□ 2.17
CIRBP-226ENST00000590171 AMPHP49418 695 aa28.59■■■□□ 2.17
CIRBP-226ENST00000590171 RRS1Q15050 365 aaKnown RBP28.58■■■□□ 2.17
CIRBP-226ENST00000590171 LTV1Q96GA3 475 aaPredicted RBP28.58■■■□□ 2.17
CIRBP-226ENST00000590171 PARD3Q8TEW0 1356 aa28.58■■■□□ 2.17
CIRBP-226ENST00000590171 BCL9O00512 1426 aa28.58■■■□□ 2.17
CIRBP-226ENST00000590171 IL2RBP14784 551 aa28.57■■■□□ 2.16
CIRBP-226ENST00000590171 POLR3GLQ9BT43 218 aa28.57■■■□□ 2.16
CIRBP-226ENST00000590171 RTL1A6NKG5 1358 aa28.57■■■□□ 2.16
CIRBP-226ENST00000590171 FAM208AQ9UK61 1670 aaKnown RBP28.55■■■□□ 2.16
CIRBP-226ENST00000590171 PSDA5PKW4 1024 aaPredicted RBP28.55■■■□□ 2.16
CIRBP-226ENST00000590171 SBF2Q86WG5 1849 aa28.54■■■□□ 2.16
CIRBP-226ENST00000590171 RREB1Q92766 1687 aa28.54■■■□□ 2.16
CIRBP-226ENST00000590171 PTF1AQ7RTS3 328 aa28.53■■■□□ 2.16
CIRBP-226ENST00000590171 BCL11BQ9C0K0 894 aaPredicted RBP28.51■■■□□ 2.15
CIRBP-226ENST00000590171 R3HDM1Q15032 1099 aaKnown RBP28.49■■■□□ 2.15
CIRBP-226ENST00000590171 NUP188Q5SRE5 1749 aa28.49■■■□□ 2.15
CIRBP-226ENST00000590171 CGNL1Q0VF96 1302 aa28.47■■■□□ 2.15
CIRBP-226ENST00000590171 FLT4P35916 1363 aa28.46■■■□□ 2.15
CIRBP-226ENST00000590171 KIF24Q5T7B8 1368 aa28.46■■■□□ 2.15
CIRBP-226ENST00000590171 SRCAPQ6ZRS2 3230 aa28.46■■■□□ 2.15
CIRBP-226ENST00000590171 RGPD3A6NKT7 1758 aaPredicted RBP28.45■■■□□ 2.15
CIRBP-226ENST00000590171 RGPD4Q7Z3J3 1758 aa28.45■■■□□ 2.15
CIRBP-226ENST00000590171 PLSCR1O15162 318 aa28.45■■■□□ 2.14
CIRBP-226ENST00000590171 HSP90AB2PQ58FF8 381 aa28.45■■■□□ 2.14
CIRBP-226ENST00000590171 INSRP06213 1382 aa28.45■■■□□ 2.14
CIRBP-226ENST00000590171 RGPD2P0DJD1 1756 aa28.45■■■□□ 2.14
CIRBP-226ENST00000590171 EMILIN1Q9Y6C2 1016 aa28.44■■■□□ 2.14
CIRBP-226ENST00000590171 SMG6Q86US8 1419 aaKnown RBP28.43■■■□□ 2.14
CIRBP-226ENST00000590171 NBPF6Q5VWK0 638 aa28.43■■■□□ 2.14
CIRBP-226ENST00000590171 NBPF4Q96M43 638 aa28.43■■■□□ 2.14
CIRBP-226ENST00000590171 KCNQ2O43526 872 aa28.42■■■□□ 2.14
CIRBP-226ENST00000590171 MEGF6O75095 1541 aa28.42■■■□□ 2.14
CIRBP-226ENST00000590171 NHSQ6T4R5 1651 aa28.42■■■□□ 2.14
CIRBP-226ENST00000590171 ACSBG1Q96GR2 724 aa28.41■■■□□ 2.14
CIRBP-226ENST00000590171 PANK3Q9H999 370 aa28.41■■■□□ 2.14
CIRBP-226ENST00000590171 USHBP1Q8N6Y0 703 aa28.4■■■□□ 2.14
CIRBP-226ENST00000590171 LRP5O75197 1615 aa28.4■■■□□ 2.14
CIRBP-226ENST00000590171 ANKRD26Q9UPS8 1709 aa28.38■■■□□ 2.13
CIRBP-226ENST00000590171 NBPF14Q5TI25 921 aa28.38■■■□□ 2.13
CIRBP-226ENST00000590171 DDX54Q8TDD1 881 aaKnown RBP28.38■■■□□ 2.13
CIRBP-226ENST00000590171 PROM2Q8N271 834 aa28.37■■■□□ 2.13
CIRBP-226ENST00000590171 PPM1GO15355 546 aaPredicted RBP28.35■■■□□ 2.13
CIRBP-226ENST00000590171 SHANK3Q9BYB0 1731 aa28.34■■■□□ 2.13
CIRBP-226ENST00000590171 ZCRB1Q8TBF4 217 aaKnown RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms