RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 USP21Q9UK80 565 aa12.88□□□□□ -0.35
HMGN1P31-201ENST00000590085 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
HMGN1P31-201ENST00000590085 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
HMGN1P31-201ENST00000590085 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
HMGN1P31-201ENST00000590085 ARHGEF25Q86VW2 580 aa12.87□□□□□ -0.35
HMGN1P31-201ENST00000590085 COG3Q96JB2 828 aa12.87□□□□□ -0.35
HMGN1P31-201ENST00000590085 GGNBP2Q9H3C7 697 aa12.87□□□□□ -0.35
HMGN1P31-201ENST00000590085 UNC5CLQ8IV45 518 aa12.86□□□□□ -0.35
HMGN1P31-201ENST00000590085 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
HMGN1P31-201ENST00000590085 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
HMGN1P31-201ENST00000590085 SOX12O15370 315 aa12.85□□□□□ -0.35
HMGN1P31-201ENST00000590085 PER1O15534 1290 aaPredicted RBP12.85□□□□□ -0.35
HMGN1P31-201ENST00000590085 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
HMGN1P31-201ENST00000590085 SMG6Q86US8 1419 aaKnown RBP12.85□□□□□ -0.35
HMGN1P31-201ENST00000590085 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
HMGN1P31-201ENST00000590085 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
HMGN1P31-201ENST00000590085 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
HMGN1P31-201ENST00000590085 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
HMGN1P31-201ENST00000590085 RGS12O14924 1447 aa12.84□□□□□ -0.35
HMGN1P31-201ENST00000590085 VPS72Q15906 364 aa12.83□□□□□ -0.36
HMGN1P31-201ENST00000590085 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
HMGN1P31-201ENST00000590085 QTRT2Q9H974 415 aaKnown RBP12.83□□□□□ -0.36
HMGN1P31-201ENST00000590085 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
HMGN1P31-201ENST00000590085 MAP3K19Q56UN5 1328 aa12.83□□□□□ -0.36
HMGN1P31-201ENST00000590085 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
HMGN1P31-201ENST00000590085 SHANK3Q9BYB0 1731 aa12.82□□□□□ -0.36
HMGN1P31-201ENST00000590085 CRB1P82279 1406 aa12.82□□□□□ -0.36
HMGN1P31-201ENST00000590085 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
HMGN1P31-201ENST00000590085 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
HMGN1P31-201ENST00000590085 ZBTB7CA1YPR0 619 aa12.81□□□□□ -0.36
HMGN1P31-201ENST00000590085 FBLN1P23142 703 aa12.81□□□□□ -0.36
HMGN1P31-201ENST00000590085 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
HMGN1P31-201ENST00000590085 RBM6P78332 1123 aaKnown RBP12.81□□□□□ -0.36
HMGN1P31-201ENST00000590085 SPATA31A5Q5VU36 1347 aa12.81□□□□□ -0.36
HMGN1P31-201ENST00000590085 SPATA31A7Q8IWB4 1347 aa12.81□□□□□ -0.36
HMGN1P31-201ENST00000590085 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
HMGN1P31-201ENST00000590085 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
HMGN1P31-201ENST00000590085 ERBB3P21860 1342 aa12.8□□□□□ -0.36
HMGN1P31-201ENST00000590085 WDR17Q8IZU2 1322 aa12.8□□□□□ -0.36
HMGN1P31-201ENST00000590085 FLT4P35916 1363 aa12.8□□□□□ -0.36
HMGN1P31-201ENST00000590085 RXRBP28702 533 aa12.79□□□□□ -0.36
HMGN1P31-201ENST00000590085 RRS1Q15050 365 aaKnown RBP12.79□□□□□ -0.36
HMGN1P31-201ENST00000590085 SPATA31A1Q5TZJ5 1347 aa12.79□□□□□ -0.36
HMGN1P31-201ENST00000590085 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
HMGN1P31-201ENST00000590085 HOXC9P31274 260 aa12.78□□□□□ -0.36
HMGN1P31-201ENST00000590085 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
HMGN1P31-201ENST00000590085 IP6K1Q92551 441 aa12.78□□□□□ -0.36
HMGN1P31-201ENST00000590085 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
HMGN1P31-201ENST00000590085 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
HMGN1P31-201ENST00000590085 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
HMGN1P31-201ENST00000590085 INSRP06213 1382 aa12.78□□□□□ -0.36
HMGN1P31-201ENST00000590085 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.37
HMGN1P31-201ENST00000590085 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
HMGN1P31-201ENST00000590085 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
HMGN1P31-201ENST00000590085 POLKQ9UBT6 870 aa12.76□□□□□ -0.37
HMGN1P31-201ENST00000590085 NCAPD2Q15021 1401 aa12.76□□□□□ -0.37
HMGN1P31-201ENST00000590085 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
HMGN1P31-201ENST00000590085 COL3A1P02461 1466 aaPredicted RBP12.75□□□□□ -0.37
HMGN1P31-201ENST00000590085 AMPHP49418 695 aa12.75□□□□□ -0.37
HMGN1P31-201ENST00000590085 EVA1CP58658 441 aa12.75□□□□□ -0.37
HMGN1P31-201ENST00000590085 CC2D1BQ5T0F9 858 aaKnown RBP12.75□□□□□ -0.37
HMGN1P31-201ENST00000590085 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
HMGN1P31-201ENST00000590085 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
HMGN1P31-201ENST00000590085 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
HMGN1P31-201ENST00000590085 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
HMGN1P31-201ENST00000590085 ANKRD24Q8TF21 1146 aa12.74□□□□□ -0.37
HMGN1P31-201ENST00000590085 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
HMGN1P31-201ENST00000590085 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
HMGN1P31-201ENST00000590085 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
HMGN1P31-201ENST00000590085 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
HMGN1P31-201ENST00000590085 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
HMGN1P31-201ENST00000590085 THRAP3Q9Y2W1 955 aaKnown RBP12.73□□□□□ -0.37
HMGN1P31-201ENST00000590085 DDX10Q13206 875 aaKnown RBP12.72□□□□□ -0.37
HMGN1P31-201ENST00000590085 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
HMGN1P31-201ENST00000590085 TOM1L2Q6ZVM7 507 aa12.72□□□□□ -0.37
HMGN1P31-201ENST00000590085 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
HMGN1P31-201ENST00000590085 TNS2Q63HR2 1409 aa12.71□□□□□ -0.37
HMGN1P31-201ENST00000590085 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.37
HMGN1P31-201ENST00000590085 SEPT12Q8IYM1 358 aa12.71□□□□□ -0.37
HMGN1P31-201ENST00000590085 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
HMGN1P31-201ENST00000590085 MEGF6O75095 1541 aa12.71□□□□□ -0.38
HMGN1P31-201ENST00000590085 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.38
HMGN1P31-201ENST00000590085 LTV1Q96GA3 475 aaPredicted RBP12.7□□□□□ -0.38
HMGN1P31-201ENST00000590085 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
HMGN1P31-201ENST00000590085 NLRP2Q9NX02 1062 aa12.69□□□□□ -0.38
HMGN1P31-201ENST00000590085 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
HMGN1P31-201ENST00000590085 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
HMGN1P31-201ENST00000590085 OVOS2A0A0G2JMS6 1433 aa12.68□□□□□ -0.38
HMGN1P31-201ENST00000590085 KAT6BQ8WYB5 2073 aa12.68□□□□□ -0.38
HMGN1P31-201ENST00000590085 ITGB4P16144 1822 aa12.67□□□□□ -0.38
HMGN1P31-201ENST00000590085 RGPD3A6NKT7 1758 aaPredicted RBP12.67□□□□□ -0.38
HMGN1P31-201ENST00000590085 RGPD4Q7Z3J3 1758 aa12.67□□□□□ -0.38
HMGN1P31-201ENST00000590085 MTHFSP49914 203 aa12.67□□□□□ -0.38
HMGN1P31-201ENST00000590085 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
HMGN1P31-201ENST00000590085 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
HMGN1P31-201ENST00000590085 NBPF6Q5VWK0 638 aa12.67□□□□□ -0.38
HMGN1P31-201ENST00000590085 NBPF4Q96M43 638 aa12.67□□□□□ -0.38
HMGN1P31-201ENST00000590085 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
HMGN1P31-201ENST00000590085 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
HMGN1P31-201ENST00000590085 BTAF1O14981 1849 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms