RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 MORC1Q86VD1 984 aa16.63■□□□□ 0.25
GPATCH1-202ENST00000590062 ATRNO75882 1429 aa16.62■□□□□ 0.25
GPATCH1-202ENST00000590062 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
GPATCH1-202ENST00000590062 CC2D1BQ5T0F9 858 aaKnown RBP16.62■□□□□ 0.25
GPATCH1-202ENST00000590062 QTRT2Q9H974 415 aaKnown RBP16.62■□□□□ 0.25
GPATCH1-202ENST00000590062 COL5A2P05997 1499 aaPredicted RBP16.61■□□□□ 0.25
GPATCH1-202ENST00000590062 POTEAQ6S8J7 498 aa16.61■□□□□ 0.25
GPATCH1-202ENST00000590062 PEAK1Q9H792 1746 aa16.61■□□□□ 0.25
GPATCH1-202ENST00000590062 PARD3Q8TEW0 1356 aa16.61■□□□□ 0.25
GPATCH1-202ENST00000590062 FBLN1P23142 703 aa16.6■□□□□ 0.25
GPATCH1-202ENST00000590062 RRS1Q15050 365 aaKnown RBP16.6■□□□□ 0.25
GPATCH1-202ENST00000590062 IP6K1Q92551 441 aa16.6■□□□□ 0.25
GPATCH1-202ENST00000590062 CCDC9Q9Y3X0 531 aaKnown RBP16.6■□□□□ 0.25
GPATCH1-202ENST00000590062 RXRBP28702 533 aa16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 EVA1CP58658 441 aa16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 VPS72Q15906 364 aa16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 AXIN2Q9Y2T1 843 aa16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 FLT4P35916 1363 aa16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
GPATCH1-202ENST00000590062 HOXC9P31274 260 aa16.58■□□□□ 0.24
GPATCH1-202ENST00000590062 EMILIN1Q9Y6C2 1016 aa16.58■□□□□ 0.24
GPATCH1-202ENST00000590062 INSRP06213 1382 aa16.57■□□□□ 0.24
GPATCH1-202ENST00000590062 ERBB3P21860 1342 aa16.57■□□□□ 0.24
GPATCH1-202ENST00000590062 AMPHP49418 695 aa16.57■□□□□ 0.24
GPATCH1-202ENST00000590062 GJD4Q96KN9 370 aaPredicted RBP16.57■□□□□ 0.24
GPATCH1-202ENST00000590062 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
GPATCH1-202ENST00000590062 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
GPATCH1-202ENST00000590062 GLI3P10071 1580 aa16.55■□□□□ 0.24
GPATCH1-202ENST00000590062 WDR17Q8IZU2 1322 aa16.55■□□□□ 0.24
GPATCH1-202ENST00000590062 RALBP1Q15311 655 aa16.55■□□□□ 0.24
GPATCH1-202ENST00000590062 FAM208AQ9UK61 1670 aaKnown RBP16.55■□□□□ 0.24
GPATCH1-202ENST00000590062 CRB1P82279 1406 aa16.54■□□□□ 0.24
GPATCH1-202ENST00000590062 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
GPATCH1-202ENST00000590062 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
GPATCH1-202ENST00000590062 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
GPATCH1-202ENST00000590062 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
GPATCH1-202ENST00000590062 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
GPATCH1-202ENST00000590062 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
GPATCH1-202ENST00000590062 TOM1L2Q6ZVM7 507 aa16.52■□□□□ 0.24
GPATCH1-202ENST00000590062 ANKRD24Q8TF21 1146 aa16.52■□□□□ 0.24
GPATCH1-202ENST00000590062 RGS12O14924 1447 aa16.52■□□□□ 0.23
GPATCH1-202ENST00000590062 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
GPATCH1-202ENST00000590062 COL3A1P02461 1466 aaPredicted RBP16.51■□□□□ 0.23
GPATCH1-202ENST00000590062 MTHFSP49914 203 aa16.51■□□□□ 0.23
GPATCH1-202ENST00000590062 A0A0G2JS52 829 aa16.5■□□□□ 0.23
GPATCH1-202ENST00000590062 PPM1GO15355 546 aaPredicted RBP16.5■□□□□ 0.23
GPATCH1-202ENST00000590062 MYT1Q01538 1121 aa16.5■□□□□ 0.23
GPATCH1-202ENST00000590062 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
GPATCH1-202ENST00000590062 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
GPATCH1-202ENST00000590062 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
GPATCH1-202ENST00000590062 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
GPATCH1-202ENST00000590062 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
GPATCH1-202ENST00000590062 CARD10Q9BWT7 1032 aa16.49■□□□□ 0.23
GPATCH1-202ENST00000590062 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
GPATCH1-202ENST00000590062 TCP11L2Q8N4U5 519 aa16.48■□□□□ 0.23
GPATCH1-202ENST00000590062 MYBBP1AQ9BQG0 1328 aaKnown RBP16.47■□□□□ 0.23
GPATCH1-202ENST00000590062 WNK3Q9BYP7 1800 aa16.47■□□□□ 0.23
GPATCH1-202ENST00000590062 THSD7AQ9UPZ6 1657 aa16.47■□□□□ 0.23
GPATCH1-202ENST00000590062 ONECUT3O60422 494 aaPredicted RBP16.47■□□□□ 0.23
GPATCH1-202ENST00000590062 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
GPATCH1-202ENST00000590062 FAM98CQ17RN3 349 aaKnown RBP16.47■□□□□ 0.23
GPATCH1-202ENST00000590062 BARGINQ6ZT62 677 aa16.47■□□□□ 0.23
GPATCH1-202ENST00000590062 LTV1Q96GA3 475 aaPredicted RBP16.47■□□□□ 0.23
GPATCH1-202ENST00000590062 RGPD1P0DJD0 1748 aa16.46■□□□□ 0.23
GPATCH1-202ENST00000590062 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.23
GPATCH1-202ENST00000590062 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
GPATCH1-202ENST00000590062 IL13P35225 146 aa16.45■□□□□ 0.22
GPATCH1-202ENST00000590062 RGPD2P0DJD1 1756 aa16.44■□□□□ 0.22
GPATCH1-202ENST00000590062 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
GPATCH1-202ENST00000590062 SEPT12Q8IYM1 358 aa16.44■□□□□ 0.22
GPATCH1-202ENST00000590062 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
GPATCH1-202ENST00000590062 PARP4Q9UKK3 1724 aaKnown RBP16.44■□□□□ 0.22
GPATCH1-202ENST00000590062 IGSF1Q8N6C5 1336 aa16.44■□□□□ 0.22
GPATCH1-202ENST00000590062 PLEKHG2Q9H7P9 1386 aa16.43■□□□□ 0.22
GPATCH1-202ENST00000590062 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
GPATCH1-202ENST00000590062 CDCA7Q9BWT1 371 aaPredicted RBP16.43■□□□□ 0.22
GPATCH1-202ENST00000590062 ANP32CO43423 234 aa16.42■□□□□ 0.22
GPATCH1-202ENST00000590062 DIAPH1O60610 1272 aaKnown RBP16.42■□□□□ 0.22
GPATCH1-202ENST00000590062 EYA1Q99502 592 aa16.42■□□□□ 0.22
GPATCH1-202ENST00000590062 BRWD3Q6RI45 1802 aa16.42■□□□□ 0.22
GPATCH1-202ENST00000590062 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
GPATCH1-202ENST00000590062 KDRP35968 1356 aa16.41■□□□□ 0.22
GPATCH1-202ENST00000590062 IL2RBP14784 551 aa16.39■□□□□ 0.21
GPATCH1-202ENST00000590062 KRT27Q7Z3Y8 459 aa16.39■□□□□ 0.21
GPATCH1-202ENST00000590062 MEGF6O75095 1541 aa16.39■□□□□ 0.21
GPATCH1-202ENST00000590062 OVOS2A0A0G2JMS6 1433 aa16.38■□□□□ 0.21
GPATCH1-202ENST00000590062 TNS2Q63HR2 1409 aa16.37■□□□□ 0.21
GPATCH1-202ENST00000590062 PDE3BQ13370 1112 aa16.37■□□□□ 0.21
GPATCH1-202ENST00000590062 DDB1Q16531 1140 aa16.37■□□□□ 0.21
GPATCH1-202ENST00000590062 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
GPATCH1-202ENST00000590062 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
GPATCH1-202ENST00000590062 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
GPATCH1-202ENST00000590062 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
GPATCH1-202ENST00000590062 DIEXFQ68CQ4 756 aaKnown RBP16.34■□□□□ 0.21
GPATCH1-202ENST00000590062 EXOC5O00471 708 aa16.33■□□□□ 0.2
GPATCH1-202ENST00000590062 TATP17735 454 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms