RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 COL18A1P39060 1754 aa16.8■□□□□ 0.28
MBD1-218ENST00000589541 CSB-PGBD3P0DP91 1061 aa16.8■□□□□ 0.28
MBD1-218ENST00000589541 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
MBD1-218ENST00000589541 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
MBD1-218ENST00000589541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
MBD1-218ENST00000589541 SBNO2Q9Y2G9 1366 aa16.78■□□□□ 0.28
MBD1-218ENST00000589541 LRRC37A3O60309 1634 aa16.78■□□□□ 0.28
MBD1-218ENST00000589541 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
MBD1-218ENST00000589541 NFAT5O94916 1531 aa16.77■□□□□ 0.28
MBD1-218ENST00000589541 TMC1Q8TDI8 760 aa16.77■□□□□ 0.28
MBD1-218ENST00000589541 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
MBD1-218ENST00000589541 RREB1Q92766 1687 aa16.77■□□□□ 0.28
MBD1-218ENST00000589541 TONSLQ96HA7 1378 aa16.77■□□□□ 0.27
MBD1-218ENST00000589541 NUP188Q5SRE5 1749 aa16.76■□□□□ 0.27
MBD1-218ENST00000589541 PEAK1Q9H792 1746 aa16.76■□□□□ 0.27
MBD1-218ENST00000589541 PTF1AQ7RTS3 328 aa16.76■□□□□ 0.27
MBD1-218ENST00000589541 MARCH10Q8NA82 808 aaPredicted RBP16.76■□□□□ 0.27
MBD1-218ENST00000589541 CDCA7Q9BWT1 371 aaPredicted RBP16.76■□□□□ 0.27
MBD1-218ENST00000589541 NME9Q86XW9 330 aa16.75■□□□□ 0.27
MBD1-218ENST00000589541 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
MBD1-218ENST00000589541 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
MBD1-218ENST00000589541 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
MBD1-218ENST00000589541 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
MBD1-218ENST00000589541 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
MBD1-218ENST00000589541 RGPD5Q99666 1765 aa16.73■□□□□ 0.27
MBD1-218ENST00000589541 USP31Q70CQ4 1352 aa16.73■□□□□ 0.27
MBD1-218ENST00000589541 PLSCR1O15162 318 aa16.72■□□□□ 0.27
MBD1-218ENST00000589541 WNK3Q9BYP7 1800 aa16.72■□□□□ 0.27
MBD1-218ENST00000589541 EXOC5O00471 708 aa16.71■□□□□ 0.27
MBD1-218ENST00000589541 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
MBD1-218ENST00000589541 ABCC6O95255 1503 aa16.7■□□□□ 0.26
MBD1-218ENST00000589541 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
MBD1-218ENST00000589541 TERF2IPQ9NYB0 399 aa16.7■□□□□ 0.26
MBD1-218ENST00000589541 BCL9O00512 1426 aa16.7■□□□□ 0.26
MBD1-218ENST00000589541 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
MBD1-218ENST00000589541 SBF2Q86WG5 1849 aa16.69■□□□□ 0.26
MBD1-218ENST00000589541 ERBB3P21860 1342 aa16.69■□□□□ 0.26
MBD1-218ENST00000589541 A0A1W2PP64 1363 aa16.68■□□□□ 0.26
MBD1-218ENST00000589541 SPON1Q9HCB6 807 aa16.68■□□□□ 0.26
MBD1-218ENST00000589541 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
MBD1-218ENST00000589541 RGPD3A6NKT7 1758 aaPredicted RBP16.67■□□□□ 0.26
MBD1-218ENST00000589541 RGPD4Q7Z3J3 1758 aa16.67■□□□□ 0.26
MBD1-218ENST00000589541 PROM2Q8N271 834 aa16.67■□□□□ 0.26
MBD1-218ENST00000589541 TNS2Q63HR2 1409 aa16.67■□□□□ 0.26
MBD1-218ENST00000589541 USP54Q70EL1 1684 aa16.66■□□□□ 0.26
MBD1-218ENST00000589541 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
MBD1-218ENST00000589541 KCNQ2O43526 872 aa16.66■□□□□ 0.26
MBD1-218ENST00000589541 ANKRD24Q8TF21 1146 aa16.66■□□□□ 0.26
MBD1-218ENST00000589541 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
MBD1-218ENST00000589541 PPP1R1BQ9UD71 204 aaPredicted RBP16.66■□□□□ 0.26
MBD1-218ENST00000589541 TESK2Q96S53 571 aa16.65■□□□□ 0.26
MBD1-218ENST00000589541 IL2RBP14784 551 aa16.64■□□□□ 0.25
MBD1-218ENST00000589541 LTN1O94822 1766 aa16.64■□□□□ 0.25
MBD1-218ENST00000589541 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
MBD1-218ENST00000589541 ACSBG1Q96GR2 724 aa16.63■□□□□ 0.25
MBD1-218ENST00000589541 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
MBD1-218ENST00000589541 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
MBD1-218ENST00000589541 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
MBD1-218ENST00000589541 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
MBD1-218ENST00000589541 IP6K1Q92551 441 aa16.6■□□□□ 0.25
MBD1-218ENST00000589541 COG3Q96JB2 828 aa16.6■□□□□ 0.25
MBD1-218ENST00000589541 STK32BQ9NY57 414 aa16.6■□□□□ 0.25
MBD1-218ENST00000589541 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
MBD1-218ENST00000589541 FBLN1P23142 703 aa16.58■□□□□ 0.24
MBD1-218ENST00000589541 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.24
MBD1-218ENST00000589541 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
MBD1-218ENST00000589541 MAP3K19Q56UN5 1328 aa16.58■□□□□ 0.24
MBD1-218ENST00000589541 NHSQ6T4R5 1651 aa16.58■□□□□ 0.24
MBD1-218ENST00000589541 CASZ1Q86V15 1759 aa16.58■□□□□ 0.24
MBD1-218ENST00000589541 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
MBD1-218ENST00000589541 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
MBD1-218ENST00000589541 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
MBD1-218ENST00000589541 AMPHP49418 695 aa16.56■□□□□ 0.24
MBD1-218ENST00000589541 USP47Q96K76 1375 aa16.55■□□□□ 0.24
MBD1-218ENST00000589541 HOXC9P31274 260 aa16.55■□□□□ 0.24
MBD1-218ENST00000589541 TMF1P82094 1093 aa16.55■□□□□ 0.24
MBD1-218ENST00000589541 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
MBD1-218ENST00000589541 PTGER2P43116 358 aa16.54■□□□□ 0.24
MBD1-218ENST00000589541 YY1P25490 414 aa16.53■□□□□ 0.24
MBD1-218ENST00000589541 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
MBD1-218ENST00000589541 FYB1O15117 783 aa16.52■□□□□ 0.24
MBD1-218ENST00000589541 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
MBD1-218ENST00000589541 FAM208AQ9UK61 1670 aaKnown RBP16.52■□□□□ 0.23
MBD1-218ENST00000589541 BTAF1O14981 1849 aa16.52■□□□□ 0.23
MBD1-218ENST00000589541 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
MBD1-218ENST00000589541 MTFR1LQ9H019 292 aa16.51■□□□□ 0.23
MBD1-218ENST00000589541 LRRC4BQ9NT99 713 aa16.51■□□□□ 0.23
MBD1-218ENST00000589541 MYOM1P52179 1685 aa16.5■□□□□ 0.23
MBD1-218ENST00000589541 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
MBD1-218ENST00000589541 RTL1A6NKG5 1358 aa16.5■□□□□ 0.23
MBD1-218ENST00000589541 PAPPAQ13219 1627 aa16.49■□□□□ 0.23
MBD1-218ENST00000589541 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
MBD1-218ENST00000589541 ZCRB1Q8TBF4 217 aaKnown RBP16.49■□□□□ 0.23
MBD1-218ENST00000589541 MEGF6O75095 1541 aa16.49■□□□□ 0.23
MBD1-218ENST00000589541 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
MBD1-218ENST00000589541 NBPF6Q5VWK0 638 aa16.48■□□□□ 0.23
MBD1-218ENST00000589541 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
MBD1-218ENST00000589541 NBPF4Q96M43 638 aa16.48■□□□□ 0.23
MBD1-218ENST00000589541 FHDC1Q9C0D6 1143 aaPredicted RBP16.48■□□□□ 0.23
MBD1-218ENST00000589541 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms