RNA–Protein interactions for RNA: ENST00000589536.5

GRN-215, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-215ENST00000589536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.61■■■■□ 3.13
GRN-215ENST00000589536 TMC1Q8TDI8 760 aa34.61■■■■□ 3.13
GRN-215ENST00000589536 TESK2Q96S53 571 aa34.61■■■■□ 3.13
GRN-215ENST00000589536 LRRC37A3O60309 1634 aa34.6■■■■□ 3.13
GRN-215ENST00000589536 TOM1L2Q6ZVM7 507 aa34.6■■■■□ 3.13
GRN-215ENST00000589536 ABCC6O95255 1503 aa34.6■■■■□ 3.13
GRN-215ENST00000589536 RGPD5Q99666 1765 aa34.59■■■■□ 3.13
GRN-215ENST00000589536 WNK3Q9BYP7 1800 aa34.58■■■■□ 3.13
GRN-215ENST00000589536 EDC4Q6P2E9 1401 aaKnown RBP34.58■■■■□ 3.13
GRN-215ENST00000589536 A0A1W2PP64 1363 aa34.58■■■■□ 3.13
GRN-215ENST00000589536 ST20-MTHFSA0A0A6YYL1 179 aa34.57■■■■□ 3.12
GRN-215ENST00000589536 HDGFL2Q7Z4V5 671 aaPredicted RBP34.57■■■■□ 3.12
GRN-215ENST00000589536 NME9Q86XW9 330 aa34.57■■■■□ 3.12
GRN-215ENST00000589536 EZH2Q15910 746 aaKnown RBP34.56■■■■□ 3.12
GRN-215ENST00000589536 CAMKK2Q96RR4 588 aa34.56■■■■□ 3.12
GRN-215ENST00000589536 PEAK1Q9H792 1746 aa34.55■■■■□ 3.12
GRN-215ENST00000589536 PARD3Q8TEW0 1356 aa34.53■■■■□ 3.12
GRN-215ENST00000589536 PSDA5PKW4 1024 aaPredicted RBP34.53■■■■□ 3.12
GRN-215ENST00000589536 APBA3O96018 575 aa34.53■■■■□ 3.12
GRN-215ENST00000589536 TERF2IPQ9NYB0 399 aa34.53■■■■□ 3.12
GRN-215ENST00000589536 OVOS2A0A0G2JMS6 1433 aa34.52■■■■□ 3.12
GRN-215ENST00000589536 OVOS2A0A0J9YW53 1432 aa34.52■■■■□ 3.12
GRN-215ENST00000589536 OVOS2Q6IE36 1432 aa34.52■■■■□ 3.12
GRN-215ENST00000589536 LRP5O75197 1615 aa34.52■■■■□ 3.12
GRN-215ENST00000589536 NINLQ9Y2I6 1382 aa34.51■■■■□ 3.12
GRN-215ENST00000589536 CARD10Q9BWT7 1032 aa34.5■■■■□ 3.11
GRN-215ENST00000589536 C11orf95C9JLR9 678 aaPredicted RBP34.49■■■■□ 3.11
GRN-215ENST00000589536 DDB1Q16531 1140 aa34.49■■■■□ 3.11
GRN-215ENST00000589536 RREB1Q92766 1687 aa34.49■■■■□ 3.11
GRN-215ENST00000589536 CSB-PGBD3P0DP91 1061 aa34.48■■■■□ 3.11
GRN-215ENST00000589536 CDCA7Q9BWT1 371 aaPredicted RBP34.48■■■■□ 3.11
GRN-215ENST00000589536 SLC24A1O60721 1099 aa34.47■■■■□ 3.11
GRN-215ENST00000589536 LTN1O94822 1766 aa34.46■■■■□ 3.11
GRN-215ENST00000589536 USP47Q96K76 1375 aa34.45■■■■□ 3.11
GRN-215ENST00000589536 R3HDM1Q15032 1099 aaKnown RBP34.44■■■■□ 3.1
GRN-215ENST00000589536 CCDC7Q96M83 1385 aa34.44■■■■□ 3.1
GRN-215ENST00000589536 SBF2Q86WG5 1849 aa34.42■■■■□ 3.1
GRN-215ENST00000589536 NUP188Q5SRE5 1749 aa34.42■■■■□ 3.1
GRN-215ENST00000589536 ERBB3P21860 1342 aa34.42■■■■□ 3.1
GRN-215ENST00000589536 BCL9O00512 1426 aa34.4■■■■□ 3.1
GRN-215ENST00000589536 MARCH10Q8NA82 808 aaPredicted RBP34.4■■■■□ 3.1
GRN-215ENST00000589536 ANKRD36BQ8N2N9 1353 aa34.36■■■■□ 3.09
GRN-215ENST00000589536 TNS2Q63HR2 1409 aa34.36■■■■□ 3.09
GRN-215ENST00000589536 RGPD3A6NKT7 1758 aaPredicted RBP34.36■■■■□ 3.09
GRN-215ENST00000589536 RGPD4Q7Z3J3 1758 aa34.36■■■■□ 3.09
GRN-215ENST00000589536 TMF1P82094 1093 aa34.34■■■■□ 3.09
GRN-215ENST00000589536 CLSPNQ9HAW4 1339 aa34.32■■■■□ 3.09
GRN-215ENST00000589536 PTF1AQ7RTS3 328 aa34.32■■■■□ 3.08
GRN-215ENST00000589536 ANKRD24Q8TF21 1146 aa34.32■■■■□ 3.08
GRN-215ENST00000589536 BCL11BQ9C0K0 894 aaPredicted RBP34.32■■■■□ 3.08
GRN-215ENST00000589536 TIMELESSQ9UNS1 1208 aa34.32■■■■□ 3.08
GRN-215ENST00000589536 EXOC5O00471 708 aa34.31■■■■□ 3.08
GRN-215ENST00000589536 NLRP2Q9NX02 1062 aa34.31■■■■□ 3.08
GRN-215ENST00000589536 PLSCR1O15162 318 aa34.29■■■■□ 3.08
GRN-215ENST00000589536 COG3Q96JB2 828 aa34.29■■■■□ 3.08
GRN-215ENST00000589536 IP6K1Q92551 441 aa34.28■■■■□ 3.08
GRN-215ENST00000589536 NBPF14Q5TI25 921 aa34.25■■■■□ 3.07
GRN-215ENST00000589536 PCGF6Q9BYE7 350 aa34.25■■■■□ 3.07
GRN-215ENST00000589536 IL2RBP14784 551 aa34.24■■■■□ 3.07
GRN-215ENST00000589536 FAM208AQ9UK61 1670 aaKnown RBP34.24■■■■□ 3.07
GRN-215ENST00000589536 MAP3K19Q56UN5 1328 aa34.24■■■■□ 3.07
GRN-215ENST00000589536 CDCA8Q53HL2 280 aa34.21■■■■□ 3.07
GRN-215ENST00000589536 FBLN1P23142 703 aa34.2■■■■□ 3.07
GRN-215ENST00000589536 NHSQ6T4R5 1651 aa34.19■■■■□ 3.06
GRN-215ENST00000589536 FYB1O15117 783 aa34.19■■■■□ 3.06
GRN-215ENST00000589536 MYOM1P52179 1685 aa34.19■■■■□ 3.06
GRN-215ENST00000589536 HOXC9P31274 260 aa34.18■■■■□ 3.06
GRN-215ENST00000589536 PROM2Q8N271 834 aa34.17■■■■□ 3.06
GRN-215ENST00000589536 LTV1Q96GA3 475 aaPredicted RBP34.16■■■■□ 3.06
GRN-215ENST00000589536 GGNBP2Q9H3C7 697 aa34.16■■■■□ 3.06
GRN-215ENST00000589536 RTL1A6NKG5 1358 aa34.15■■■■□ 3.06
GRN-215ENST00000589536 KCNQ2O43526 872 aa34.15■■■■□ 3.06
GRN-215ENST00000589536 AMPHP49418 695 aa34.14■■■■□ 3.06
GRN-215ENST00000589536 ANO8Q9HCE9 1232 aaPredicted RBP34.14■■■■□ 3.06
GRN-215ENST00000589536 KIF20BQ96Q89 1820 aa34.14■■■■□ 3.06
GRN-215ENST00000589536 RRS1Q15050 365 aaKnown RBP34.1■■■■□ 3.05
GRN-215ENST00000589536 TXNRD1Q16881 649 aa34.09■■■■□ 3.05
GRN-215ENST00000589536 ACSBG1Q96GR2 724 aa34.09■■■■□ 3.05
GRN-215ENST00000589536 RGPD2P0DJD1 1756 aa34.08■■■■□ 3.05
GRN-215ENST00000589536 CARD14Q9BXL6 1004 aa34.08■■■■□ 3.05
GRN-215ENST00000589536 CASZ1Q86V15 1759 aa34.06■■■■□ 3.04
GRN-215ENST00000589536 NSD3Q9BZ95 1437 aa34.05■■■■□ 3.04
GRN-215ENST00000589536 BTAF1O14981 1849 aa34.04■■■■□ 3.04
GRN-215ENST00000589536 MEGF6O75095 1541 aa34.03■■■■□ 3.04
GRN-215ENST00000589536 SPON1Q9HCB6 807 aa34.01■■■■□ 3.03
GRN-215ENST00000589536 SHANK3Q9BYB0 1731 aa34.01■■■■□ 3.03
GRN-215ENST00000589536 DDX54Q8TDD1 881 aaKnown RBP34■■■■□ 3.03
GRN-215ENST00000589536 KIF24Q5T7B8 1368 aa33.99■■■■□ 3.03
GRN-215ENST00000589536 NBPF6Q5VWK0 638 aa33.99■■■■□ 3.03
GRN-215ENST00000589536 NBPF4Q96M43 638 aa33.99■■■■□ 3.03
GRN-215ENST00000589536 INSRP06213 1382 aa33.98■■■■□ 3.03
GRN-215ENST00000589536 FLT4P35916 1363 aa33.98■■■■□ 3.03
GRN-215ENST00000589536 SMG6Q86US8 1419 aaKnown RBP33.98■■■■□ 3.03
GRN-215ENST00000589536 PAPPAQ13219 1627 aa33.97■■■■□ 3.03
GRN-215ENST00000589536 PDGFDQ9GZP0 370 aaPredicted RBP33.97■■■■□ 3.03
GRN-215ENST00000589536 HSP90AB2PQ58FF8 381 aa33.96■■■■□ 3.03
GRN-215ENST00000589536 STK32BQ9NY57 414 aa33.96■■■■□ 3.03
GRN-215ENST00000589536 SLC15A2Q16348 729 aa33.94■■■■□ 3.02
GRN-215ENST00000589536 ZCRB1Q8TBF4 217 aaKnown RBP33.94■■■■□ 3.02
GRN-215ENST00000589536 CCER1Q8TC90 406 aaPredicted RBP33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms