RNA–Protein interactions for RNA: ENST00000589444.1

PTPN2-209, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

Gene PTPN2, Length 2,264 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-209	ENST00000589444	POTEF	A5A3E0	1075 aa		7.06	□□□□□ -1.28
PTPN2-209	ENST00000589444	EPB41L2	O43491	1005 aa	Known RBP	7.06	□□□□□ -1.28
PTPN2-209	ENST00000589444	SEC24B	O95487	1268 aa		7.06	□□□□□ -1.28
PTPN2-209	ENST00000589444	EVA1C	P58658	441 aa		7.06	□□□□□ -1.28
PTPN2-209	ENST00000589444	SOGA3	Q5TF21	947 aa		7.06	□□□□□ -1.28
PTPN2-209	ENST00000589444	STAG1	Q8WVM7	1258 aa		7.06	□□□□□ -1.28
PTPN2-209	ENST00000589444	TSPYL2	Q9H2G4	693 aa	Predicted RBP	7.06	□□□□□ -1.28
PTPN2-209	ENST00000589444	GRXCR2	A6NFK2	248 aa		7.05	□□□□□ -1.28
PTPN2-209	ENST00000589444	COPB2	P35606	906 aa		7.05	□□□□□ -1.28
PTPN2-209	ENST00000589444	ILDR2	Q71H61	639 aa		7.05	□□□□□ -1.28
PTPN2-209	ENST00000589444	EMILIN3	Q9NT22	766 aa		7.05	□□□□□ -1.28
PTPN2-209	ENST00000589444	ZMIZ1	Q9ULJ6	1067 aa		7.05	□□□□□ -1.28
PTPN2-209	ENST00000589444	MRPL58	Q14197	206 aa	Known RBP	7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	CAPN10	Q9HC96	672 aa		7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	LZTS3	O60299	673 aa	Predicted RBP	7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	HSP90AA1	P07900	732 aa	Known RBP	7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	NT5DC4	Q86YG4	428 aa		7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	STK32A	Q8WU08	396 aa		7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	GML	Q99445	158 aa		7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	ARHGEF10L	Q9HCE6	1279 aa		7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	NES	P48681	1621 aa		7.04	□□□□□ -1.28
PTPN2-209	ENST00000589444	CFAP69	A5D8W1	941 aa		7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	PPP1R15B	Q5SWA1	713 aa		7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	LDLRAD1	Q5T700	205 aa		7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	PCGF5	Q86SE9	256 aa		7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	METTL16	Q86W50	562 aa	Known RBP	7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	OSBPL2	Q9H1P3	480 aa		7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	ZRANB2	O95218	330 aa	Known RBP eCLIP	7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	TGIF2	Q9GZN2	237 aa		7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	TMX4	Q9H1E5	349 aa	Predicted RBP	7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	TCEAL9	Q9UHQ7	104 aa		7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	NDUFB9	Q9Y6M9	179 aa		7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	7.03	□□□□□ -1.28
PTPN2-209	ENST00000589444	DNAJC6	O75061	913 aa		7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	STK10	O94804	968 aa	Known RBP	7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	OSBP	P22059	807 aa		7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	COL19A1	Q14993	1142 aa		7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	EFCAB3	Q8N7B9	438 aa		7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	NRBP1	Q9UHY1	535 aa		7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	MRPL42	Q9Y6G3	142 aa	Known RBP	7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	GLIPR1L2	Q4G1C9	344 aa		7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	L3MBTL3	Q96JM7	780 aa	Predicted RBP	7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	LIMD1	Q9UGP4	676 aa		7.02	□□□□□ -1.29
PTPN2-209	ENST00000589444	PSEN1	P49768	467 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	VAC14	Q08AM6	782 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	JDP2	Q8WYK2	163 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	ARHGEF11	O15085	1522 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	UBE4A	Q14139	1066 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	PPP1R18	Q6NYC8	613 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	IL17RA	Q96F46	866 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	EPAS1	Q99814	870 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	CCSER2	Q9H7U1	834 aa		7.01	□□□□□ -1.29
PTPN2-209	ENST00000589444	LMOD3	Q0VAK6	560 aa		7	□□□□□ -1.29
PTPN2-209	ENST00000589444	FAM161A	Q3B820	660 aa		7	□□□□□ -1.29
PTPN2-209	ENST00000589444	KANK4	Q5T7N3	995 aa	Predicted RBP	7	□□□□□ -1.29
PTPN2-209	ENST00000589444	ZNF710	Q8N1W2	664 aa		7	□□□□□ -1.29
PTPN2-209	ENST00000589444	C8orf48	Q96LL4	319 aa		7	□□□□□ -1.29
PTPN2-209	ENST00000589444	MAP3K20	Q9NYL2	800 aa	Known RBP	7	□□□□□ -1.29
PTPN2-209	ENST00000589444	PTGDR	Q13258	359 aa		6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	GNL2	Q13823	731 aa	Known RBP	6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	DIXDC1	Q155Q3	683 aa		6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	ASB16	Q96NS5	453 aa		6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	NAP1L4	Q99733	375 aa	Known RBP	6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	SLAIN2	Q9P270	581 aa		6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	PDGFRB	P09619	1106 aa		6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	DNAJA1	P31689	397 aa	Known RBP	6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	EAPP	Q56P03	285 aa	Predicted RBP	6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	CASC1	Q6TDU7	716 aa		6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	TSC1	Q92574	1164 aa		6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	GJD4	Q96KN9	370 aa	Predicted RBP	6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	SFMBT1	Q9UHJ3	866 aa		6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	NOVA2	Q9UNW9	492 aa	Known RBP	6.99	□□□□□ -1.29
PTPN2-209	ENST00000589444	TTLL13P	A6NNM8	815 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	SNPH	O15079	494 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	GIGYF1	O75420	1035 aa	Predicted RBP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	VIL1	P09327	827 aa	Known RBP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	DHX8	Q14562	1220 aa	Known RBP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	ERICH6B	Q5W0A0	696 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	TBC1D9	Q6ZT07	1266 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	PRR7	Q8TB68	274 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	PHOX2B	Q99453	314 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	SCIN	Q9Y6U3	715 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	ENPP3	O14638	875 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	MAP3K13	O43283	966 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	AP1G2	O75843	785 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	MAN1A1	P33908	653 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	POU5F1	Q01860	360 aa	Known RBP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	SAFB2	Q14151	953 aa	Known RBP eCLIP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	MAP9	Q49MG5	647 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	CCSAP	Q6IQ19	270 aa	Predicted RBP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	FBXO41	Q8TF61	875 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	ZNF622	Q969S3	477 aa	Known RBP eCLIP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	PAGR1	Q9BTK6	254 aa		6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	TYW1	Q9NV66	732 aa	Known RBP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	TPX2	Q9ULW0	747 aa	Known RBP	6.98	□□□□□ -1.29
PTPN2-209	ENST00000589444	PCDHB8	Q9UN66	801 aa		6.98	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms