RNA–Protein interactions for RNA: ENST00000589429.5

U2AF1L4-212, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 4

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-212ENST00000589429 KCNH5Q8NCM2 988 aa21.71■■□□□ 1.07
U2AF1L4-212ENST00000589429 COG3Q96JB2 828 aa21.71■■□□□ 1.07
U2AF1L4-212ENST00000589429 CAMTA1Q9Y6Y1 1673 aa21.71■■□□□ 1.07
U2AF1L4-212ENST00000589429 RGPD5Q99666 1765 aa21.7■■□□□ 1.06
U2AF1L4-212ENST00000589429 FYB1O15117 783 aa21.7■■□□□ 1.06
U2AF1L4-212ENST00000589429 PER1O15534 1290 aaPredicted RBP21.7■■□□□ 1.06
U2AF1L4-212ENST00000589429 NME9Q86XW9 330 aa21.7■■□□□ 1.06
U2AF1L4-212ENST00000589429 BRWD3Q6RI45 1802 aa21.7■■□□□ 1.06
U2AF1L4-212ENST00000589429 THSD7AQ9UPZ6 1657 aa21.69■■□□□ 1.06
U2AF1L4-212ENST00000589429 WNK3Q9BYP7 1800 aa21.69■■□□□ 1.06
U2AF1L4-212ENST00000589429 ONECUT3O60422 494 aaPredicted RBP21.68■■□□□ 1.06
U2AF1L4-212ENST00000589429 STRN4Q9NRL3 753 aa21.68■■□□□ 1.06
U2AF1L4-212ENST00000589429 COL5A2P05997 1499 aaPredicted RBP21.68■■□□□ 1.06
U2AF1L4-212ENST00000589429 ANKRD26Q9UPS8 1709 aa21.68■■□□□ 1.06
U2AF1L4-212ENST00000589429 AATKQ6ZMQ8 1374 aa21.67■■□□□ 1.06
U2AF1L4-212ENST00000589429 KRT27Q7Z3Y8 459 aa21.67■■□□□ 1.06
U2AF1L4-212ENST00000589429 CCDC125Q86Z20 511 aa21.67■■□□□ 1.06
U2AF1L4-212ENST00000589429 SPATA31A5Q5VU36 1347 aa21.66■■□□□ 1.06
U2AF1L4-212ENST00000589429 SPATA31A7Q8IWB4 1347 aa21.66■■□□□ 1.06
U2AF1L4-212ENST00000589429 AMER1Q5JTC6 1135 aaPredicted RBP21.65■■□□□ 1.06
U2AF1L4-212ENST00000589429 EVA1CP58658 441 aa21.64■■□□□ 1.05
U2AF1L4-212ENST00000589429 DDX10Q13206 875 aaKnown RBP21.64■■□□□ 1.05
U2AF1L4-212ENST00000589429 GGNBP2Q9H3C7 697 aa21.64■■□□□ 1.05
U2AF1L4-212ENST00000589429 ZBTB7CA1YPR0 619 aa21.63■■□□□ 1.05
U2AF1L4-212ENST00000589429 BLMP54132 1417 aaPredicted RBP21.63■■□□□ 1.05
U2AF1L4-212ENST00000589429 ZRANB1Q9UGI0 708 aa21.62■■□□□ 1.05
U2AF1L4-212ENST00000589429 FAM208AQ9UK61 1670 aaKnown RBP21.62■■□□□ 1.05
U2AF1L4-212ENST00000589429 SF3B2Q13435 895 aaKnown RBP21.61■■□□□ 1.05
U2AF1L4-212ENST00000589429 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
U2AF1L4-212ENST00000589429 SPATA31A1Q5TZJ5 1347 aa21.6■■□□□ 1.05
U2AF1L4-212ENST00000589429 ARHGEF25Q86VW2 580 aa21.6■■□□□ 1.05
U2AF1L4-212ENST00000589429 PARP4Q9UKK3 1724 aaKnown RBP21.6■■□□□ 1.05
U2AF1L4-212ENST00000589429 KIF24Q5T7B8 1368 aa21.59■■□□□ 1.05
U2AF1L4-212ENST00000589429 FAM182BQ5T319 152 aa21.58■■□□□ 1.05
U2AF1L4-212ENST00000589429 MORC1Q86VD1 984 aa21.58■■□□□ 1.05
U2AF1L4-212ENST00000589429 CRB1P82279 1406 aa21.57■■□□□ 1.04
U2AF1L4-212ENST00000589429 SOX12O15370 315 aa21.57■■□□□ 1.04
U2AF1L4-212ENST00000589429 LARP1Q6PKG0 1096 aaKnown RBP21.57■■□□□ 1.04
U2AF1L4-212ENST00000589429 DEFB132Q7Z7B7 95 aa21.57■■□□□ 1.04
U2AF1L4-212ENST00000589429 RTL1A6NKG5 1358 aa21.55■■□□□ 1.04
U2AF1L4-212ENST00000589429 LRRC37A3O60309 1634 aa21.55■■□□□ 1.04
U2AF1L4-212ENST00000589429 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
U2AF1L4-212ENST00000589429 WDR17Q8IZU2 1322 aa21.53■■□□□ 1.04
U2AF1L4-212ENST00000589429 PEAK1Q9H792 1746 aa21.52■■□□□ 1.04
U2AF1L4-212ENST00000589429 TCP11L2Q8N4U5 519 aa21.51■■□□□ 1.03
U2AF1L4-212ENST00000589429 AXIN2Q9Y2T1 843 aa21.51■■□□□ 1.03
U2AF1L4-212ENST00000589429 SMG6Q86US8 1419 aaKnown RBP21.5■■□□□ 1.03
U2AF1L4-212ENST00000589429 RALBP1Q15311 655 aa21.5■■□□□ 1.03
U2AF1L4-212ENST00000589429 BARGINQ6ZT62 677 aa21.5■■□□□ 1.03
U2AF1L4-212ENST00000589429 PARD3Q8TEW0 1356 aa21.49■■□□□ 1.03
U2AF1L4-212ENST00000589429 THRAP3Q9Y2W1 955 aaKnown RBP21.49■■□□□ 1.03
U2AF1L4-212ENST00000589429 MAP2P11137 1827 aaKnown RBP21.49■■□□□ 1.03
U2AF1L4-212ENST00000589429 ERBB3P21860 1342 aa21.49■■□□□ 1.03
U2AF1L4-212ENST00000589429 MAP3K19Q56UN5 1328 aa21.49■■□□□ 1.03
U2AF1L4-212ENST00000589429 FLT4P35916 1363 aa21.48■■□□□ 1.03
U2AF1L4-212ENST00000589429 BAG6P46379 1132 aa21.48■■□□□ 1.03
U2AF1L4-212ENST00000589429 PDE3BQ13370 1112 aa21.48■■□□□ 1.03
U2AF1L4-212ENST00000589429 IP6K1Q92551 441 aa21.48■■□□□ 1.03
U2AF1L4-212ENST00000589429 RGPD2P0DJD1 1756 aa21.47■■□□□ 1.03
U2AF1L4-212ENST00000589429 AMPHP49418 695 aa21.47■■□□□ 1.03
U2AF1L4-212ENST00000589429 SRCAPQ6ZRS2 3230 aa21.47■■□□□ 1.03
U2AF1L4-212ENST00000589429 RGPD1P0DJD0 1748 aa21.46■■□□□ 1.03
U2AF1L4-212ENST00000589429 DISP2A7MBM2 1401 aa21.46■■□□□ 1.03
U2AF1L4-212ENST00000589429 RRS1Q15050 365 aaKnown RBP21.45■■□□□ 1.02
U2AF1L4-212ENST00000589429 TOM1L2Q6ZVM7 507 aa21.45■■□□□ 1.02
U2AF1L4-212ENST00000589429 POLKQ9UBT6 870 aa21.45■■□□□ 1.02
U2AF1L4-212ENST00000589429 TNS1Q9HBL0 1735 aaKnown RBP21.44■■□□□ 1.02
U2AF1L4-212ENST00000589429 HOXC9P31274 260 aa21.44■■□□□ 1.02
U2AF1L4-212ENST00000589429 TNNT2P45379 298 aaPredicted RBP21.44■■□□□ 1.02
U2AF1L4-212ENST00000589429 FAM196AQ6ZSG2 479 aa21.44■■□□□ 1.02
U2AF1L4-212ENST00000589429 INSRP06213 1382 aa21.44■■□□□ 1.02
U2AF1L4-212ENST00000589429 TRIM37O94972 964 aa21.43■■□□□ 1.02
U2AF1L4-212ENST00000589429 EN1Q05925 392 aaPredicted RBP21.43■■□□□ 1.02
U2AF1L4-212ENST00000589429 CSB-PGBD3P0DP91 1061 aa21.42■■□□□ 1.02
U2AF1L4-212ENST00000589429 CARD10Q9BWT7 1032 aa21.42■■□□□ 1.02
U2AF1L4-212ENST00000589429 EMILIN1Q9Y6C2 1016 aa21.42■■□□□ 1.02
U2AF1L4-212ENST00000589429 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
U2AF1L4-212ENST00000589429 FBLN1P23142 703 aa21.4■■□□□ 1.02
U2AF1L4-212ENST00000589429 ANKRD24Q8TF21 1146 aa21.4■■□□□ 1.02
U2AF1L4-212ENST00000589429 TNS2Q63HR2 1409 aa21.39■■□□□ 1.02
U2AF1L4-212ENST00000589429 ANP32CO43423 234 aa21.39■■□□□ 1.01
U2AF1L4-212ENST00000589429 PPP2R1AP30153 589 aa21.39■■□□□ 1.01
U2AF1L4-212ENST00000589429 SBF2Q86WG5 1849 aa21.39■■□□□ 1.01
U2AF1L4-212ENST00000589429 MYBBP1AQ9BQG0 1328 aaKnown RBP21.38■■□□□ 1.01
U2AF1L4-212ENST00000589429 PPM1GO15355 546 aaPredicted RBP21.38■■□□□ 1.01
U2AF1L4-212ENST00000589429 MTHFSP49914 203 aa21.38■■□□□ 1.01
U2AF1L4-212ENST00000589429 CNGB1Q14028 1251 aaPredicted RBP21.38■■□□□ 1.01
U2AF1L4-212ENST00000589429 CDCA7Q9BWT1 371 aaPredicted RBP21.38■■□□□ 1.01
U2AF1L4-212ENST00000589429 APBA3O96018 575 aa21.37■■□□□ 1.01
U2AF1L4-212ENST00000589429 CFAP53Q96M91 514 aa21.37■■□□□ 1.01
U2AF1L4-212ENST00000589429 SHANK3Q9BYB0 1731 aa21.36■■□□□ 1.01
U2AF1L4-212ENST00000589429 PSDA5PKW4 1024 aaPredicted RBP21.35■■□□□ 1.01
U2AF1L4-212ENST00000589429 EZH2Q15910 746 aaKnown RBP21.35■■□□□ 1.01
U2AF1L4-212ENST00000589429 DDB1Q16531 1140 aa21.35■■□□□ 1.01
U2AF1L4-212ENST00000589429 HSP90AB2PQ58FF8 381 aa21.35■■□□□ 1.01
U2AF1L4-212ENST00000589429 OVOS2A0A0G2JMS6 1433 aa21.35■■□□□ 1.01
U2AF1L4-212ENST00000589429 NLRP2Q9NX02 1062 aa21.34■■□□□ 1.01
U2AF1L4-212ENST00000589429 NCAPD2Q15021 1401 aa21.32■■□□□ 1
U2AF1L4-212ENST00000589429 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
U2AF1L4-212ENST00000589429 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms