RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.46
ATG4D-210ENST00000588972 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
ATG4D-210ENST00000588972 SOX11P35716 441 aa12.2□□□□□ -0.46
ATG4D-210ENST00000588972 TTC37Q6PGP7 1564 aa12.2□□□□□ -0.46
ATG4D-210ENST00000588972 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.19□□□□□ -0.46
ATG4D-210ENST00000588972 FER1L4A9Z1Z3 1794 aa12.19□□□□□ -0.46
ATG4D-210ENST00000588972 SIGLEC1Q9BZZ2 1709 aa12.19□□□□□ -0.46
ATG4D-210ENST00000588972 PATL2C9JE40 543 aaKnown RBP12.18□□□□□ -0.46
ATG4D-210ENST00000588972 BRD1O95696 1058 aa12.18□□□□□ -0.46
ATG4D-210ENST00000588972 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
ATG4D-210ENST00000588972 RGS22Q8NE09 1264 aa12.18□□□□□ -0.46
ATG4D-210ENST00000588972 TFIP11Q9UBB9 837 aaKnown RBP12.18□□□□□ -0.46
ATG4D-210ENST00000588972 MAGI2Q86UL8 1455 aa12.18□□□□□ -0.46
ATG4D-210ENST00000588972 HSPA2P54652 639 aa12.16□□□□□ -0.46
ATG4D-210ENST00000588972 MFAP1P55081 439 aaKnown RBP12.16□□□□□ -0.46
ATG4D-210ENST00000588972 KCNA1Q09470 495 aa12.16□□□□□ -0.46
ATG4D-210ENST00000588972 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
ATG4D-210ENST00000588972 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
ATG4D-210ENST00000588972 YEATS2Q9ULM3 1422 aa12.16□□□□□ -0.46
ATG4D-210ENST00000588972 PLEKHD1A6NEE1 506 aa12.15□□□□□ -0.46
ATG4D-210ENST00000588972 RNF40O75150 1001 aa12.15□□□□□ -0.46
ATG4D-210ENST00000588972 SEMA3FQ13275 785 aa12.15□□□□□ -0.46
ATG4D-210ENST00000588972 LAPTM4BQ86VI4 370 aa12.15□□□□□ -0.46
ATG4D-210ENST00000588972 VPS9D1Q9Y2B5 631 aa12.15□□□□□ -0.46
ATG4D-210ENST00000588972 HECW1Q76N89 1606 aa12.15□□□□□ -0.47
ATG4D-210ENST00000588972 PREX1Q8TCU6 1659 aa12.14□□□□□ -0.47
ATG4D-210ENST00000588972 CARNS1A5YM72 827 aa12.14□□□□□ -0.47
ATG4D-210ENST00000588972 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
ATG4D-210ENST00000588972 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
ATG4D-210ENST00000588972 MORN1Q5T089 497 aa12.14□□□□□ -0.47
ATG4D-210ENST00000588972 DESI1Q6ICB0 168 aa12.13□□□□□ -0.47
ATG4D-210ENST00000588972 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
ATG4D-210ENST00000588972 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
ATG4D-210ENST00000588972 ERBB3P21860 1342 aa12.12□□□□□ -0.47
ATG4D-210ENST00000588972 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
ATG4D-210ENST00000588972 ATG7O95352 703 aa12.12□□□□□ -0.47
ATG4D-210ENST00000588972 PNMA1Q8ND90 353 aa12.12□□□□□ -0.47
ATG4D-210ENST00000588972 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
ATG4D-210ENST00000588972 PUS10Q3MIT2 529 aaKnown RBP12.11□□□□□ -0.47
ATG4D-210ENST00000588972 CDCA8Q53HL2 280 aa12.11□□□□□ -0.47
ATG4D-210ENST00000588972 TBC1D9Q6ZT07 1266 aa12.11□□□□□ -0.47
ATG4D-210ENST00000588972 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
ATG4D-210ENST00000588972 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
ATG4D-210ENST00000588972 PBX2P40425 430 aa12.1□□□□□ -0.47
ATG4D-210ENST00000588972 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.47
ATG4D-210ENST00000588972 Q3C1V9 767 aa12.1□□□□□ -0.47
ATG4D-210ENST00000588972 LYPD8Q6UX82 237 aa12.1□□□□□ -0.47
ATG4D-210ENST00000588972 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
ATG4D-210ENST00000588972 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
ATG4D-210ENST00000588972 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
ATG4D-210ENST00000588972 BHMG1C9JSJ3 638 aaPredicted RBP12.09□□□□□ -0.47
ATG4D-210ENST00000588972 ACTN4O43707 911 aaKnown RBP12.09□□□□□ -0.47
ATG4D-210ENST00000588972 ZFRQ96KR1 1074 aaKnown RBP12.09□□□□□ -0.47
ATG4D-210ENST00000588972 PLCH2O75038 1416 aa12.09□□□□□ -0.47
ATG4D-210ENST00000588972 ATP10AO60312 1499 aa12.08□□□□□ -0.47
ATG4D-210ENST00000588972 TMEM88BA6NKF7 163 aa12.08□□□□□ -0.48
ATG4D-210ENST00000588972 ATP9BO43861 1147 aa12.08□□□□□ -0.48
ATG4D-210ENST00000588972 NR1H3Q13133 447 aa12.08□□□□□ -0.48
ATG4D-210ENST00000588972 MLECQ14165 292 aa12.08□□□□□ -0.48
ATG4D-210ENST00000588972 VRTNQ9H8Y1 702 aa12.06□□□□□ -0.48
ATG4D-210ENST00000588972 ZNF518AQ6AHZ1 1483 aa12.06□□□□□ -0.48
ATG4D-210ENST00000588972 KDM5CP41229 1560 aa12.05□□□□□ -0.48
ATG4D-210ENST00000588972 STRCQ7RTU9 1775 aa12.05□□□□□ -0.48
ATG4D-210ENST00000588972 RNF19BQ6ZMZ0 732 aa12.05□□□□□ -0.48
ATG4D-210ENST00000588972 KIF14Q15058 1648 aa12.04□□□□□ -0.48
ATG4D-210ENST00000588972 UHRF1BP1Q6BDS2 1440 aa12.04□□□□□ -0.48
ATG4D-210ENST00000588972 FBXO45P0C2W1 286 aa12.04□□□□□ -0.48
ATG4D-210ENST00000588972 BLOC1S3Q6QNY0 202 aa12.04□□□□□ -0.48
ATG4D-210ENST00000588972 ZBBXA8MT70 800 aa12.03□□□□□ -0.48
ATG4D-210ENST00000588972 FOXD4L5Q5VV16 416 aaPredicted RBP12.03□□□□□ -0.48
ATG4D-210ENST00000588972 FOXD4L4Q8WXT5 416 aaPredicted RBP12.03□□□□□ -0.48
ATG4D-210ENST00000588972 REREQ9P2R6 1566 aa12.03□□□□□ -0.48
ATG4D-210ENST00000588972 DISP3Q9P2K9 1392 aa12.03□□□□□ -0.48
ATG4D-210ENST00000588972 DIP2CQ9Y2E4 1556 aa12.02□□□□□ -0.49
ATG4D-210ENST00000588972 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
ATG4D-210ENST00000588972 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.49
ATG4D-210ENST00000588972 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
ATG4D-210ENST00000588972 USB1Q9BQ65 265 aaKnown RBP12.02□□□□□ -0.49
ATG4D-210ENST00000588972 IVNS1ABPQ9Y6Y0 642 aa12.02□□□□□ -0.49
ATG4D-210ENST00000588972 FMN1Q68DA7 1419 aa12.02□□□□□ -0.49
ATG4D-210ENST00000588972 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
ATG4D-210ENST00000588972 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
ATG4D-210ENST00000588972 F12P00748 615 aaPredicted RBP12.01□□□□□ -0.49
ATG4D-210ENST00000588972 BRICD5Q6PL45 260 aa12.01□□□□□ -0.49
ATG4D-210ENST00000588972 ZNF687Q8N1G0 1237 aa12.01□□□□□ -0.49
ATG4D-210ENST00000588972 MRPL50Q8N5N7 158 aaKnown RBP12.01□□□□□ -0.49
ATG4D-210ENST00000588972 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
ATG4D-210ENST00000588972 FKBPLQ9UIM3 349 aa12.01□□□□□ -0.49
ATG4D-210ENST00000588972 SETD1BQ9UPS6 1966 aaKnown RBP12.01□□□□□ -0.49
ATG4D-210ENST00000588972 ARHGAP35Q9NRY4 1499 aa12.01□□□□□ -0.49
ATG4D-210ENST00000588972 PIK3CDO00329 1044 aa12□□□□□ -0.49
ATG4D-210ENST00000588972 PRR14Q9BWN1 585 aa12□□□□□ -0.49
ATG4D-210ENST00000588972 CDKN2AIPQ9NXV6 580 aaPredicted RBP12□□□□□ -0.49
ATG4D-210ENST00000588972 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
ATG4D-210ENST00000588972 ABCA6Q8N139 1617 aa12□□□□□ -0.49
ATG4D-210ENST00000588972 C3P01024 1663 aa12□□□□□ -0.49
ATG4D-210ENST00000588972 TK2O00142 265 aa11.99□□□□□ -0.49
ATG4D-210ENST00000588972 CEBPAP49715 358 aaPredicted RBP11.99□□□□□ -0.49
ATG4D-210ENST00000588972 NFATC2IPQ8NCF5 419 aa11.99□□□□□ -0.49
ATG4D-210ENST00000588972 PTPRTO14522 1441 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms