RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 HOXC9P31274 260 aa27.09■■□□□ 1.93
DNMT1-216ENST00000588952 AMPHP49418 695 aa27.09■■□□□ 1.93
DNMT1-216ENST00000588952 AXIN2Q9Y2T1 843 aa27.09■■□□□ 1.93
DNMT1-216ENST00000588952 ABCC6O95255 1503 aa27.09■■□□□ 1.93
DNMT1-216ENST00000588952 RGPD5Q99666 1765 aa27.09■■□□□ 1.93
DNMT1-216ENST00000588952 CAMTA1Q9Y6Y1 1673 aa27.08■■□□□ 1.93
DNMT1-216ENST00000588952 IP6K1Q92551 441 aa27.08■■□□□ 1.93
DNMT1-216ENST00000588952 FLT4P35916 1363 aa27.08■■□□□ 1.93
DNMT1-216ENST00000588952 KIF24Q5T7B8 1368 aa27.07■■□□□ 1.92
DNMT1-216ENST00000588952 HSP90AB2PQ58FF8 381 aa27.06■■□□□ 1.92
DNMT1-216ENST00000588952 C8orf37Q96NL8 207 aa27.06■■□□□ 1.92
DNMT1-216ENST00000588952 COL3A1P02461 1466 aaPredicted RBP27.06■■□□□ 1.92
DNMT1-216ENST00000588952 MEX3CQ5U5Q3 659 aaKnown RBP27.05■■□□□ 1.92
DNMT1-216ENST00000588952 SLIT2O94813 1529 aa27.05■■□□□ 1.92
DNMT1-216ENST00000588952 NRAPQ86VF7 1730 aa27.03■■□□□ 1.92
DNMT1-216ENST00000588952 BLMP54132 1417 aaPredicted RBP27.02■■□□□ 1.92
DNMT1-216ENST00000588952 INSRP06213 1382 aa27.02■■□□□ 1.92
DNMT1-216ENST00000588952 CCDC184Q52MB2 194 aa27.02■■□□□ 1.92
DNMT1-216ENST00000588952 MIER1Q8N108 512 aa27.02■■□□□ 1.92
DNMT1-216ENST00000588952 BTG4Q9NY30 223 aa27.02■■□□□ 1.92
DNMT1-216ENST00000588952 COL5A2P05997 1499 aaPredicted RBP27.01■■□□□ 1.91
DNMT1-216ENST00000588952 NWD2Q9ULI1 1742 aa27.01■■□□□ 1.91
DNMT1-216ENST00000588952 NGLY1Q96IV0 654 aa27■■□□□ 1.91
DNMT1-216ENST00000588952 FNBP4Q8N3X1 1017 aaPredicted RBP26.98■■□□□ 1.91
DNMT1-216ENST00000588952 ANKRD24Q8TF21 1146 aa26.98■■□□□ 1.91
DNMT1-216ENST00000588952 LTV1Q96GA3 475 aaPredicted RBP26.98■■□□□ 1.91
DNMT1-216ENST00000588952 BCL9LQ86UU0 1499 aa26.98■■□□□ 1.91
DNMT1-216ENST00000588952 ERBB3P21860 1342 aa26.97■■□□□ 1.91
DNMT1-216ENST00000588952 EIF4A2Q14240 407 aaKnown RBP26.97■■□□□ 1.91
DNMT1-216ENST00000588952 AFF2P51816 1311 aa26.96■■□□□ 1.91
DNMT1-216ENST00000588952 RGPD2P0DJD1 1756 aa26.94■■□□□ 1.9
DNMT1-216ENST00000588952 IL13P35225 146 aa26.94■■□□□ 1.9
DNMT1-216ENST00000588952 STRN4Q9NRL3 753 aa26.94■■□□□ 1.9
DNMT1-216ENST00000588952 CFAP53Q96M91 514 aa26.93■■□□□ 1.9
DNMT1-216ENST00000588952 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.93■■□□□ 1.9
DNMT1-216ENST00000588952 LARP1Q6PKG0 1096 aaKnown RBP26.92■■□□□ 1.9
DNMT1-216ENST00000588952 UNC5CLQ8IV45 518 aa26.92■■□□□ 1.9
DNMT1-216ENST00000588952 WDR17Q8IZU2 1322 aa26.91■■□□□ 1.9
DNMT1-216ENST00000588952 RGPD1P0DJD0 1748 aa26.91■■□□□ 1.9
DNMT1-216ENST00000588952 DIAPH1O60610 1272 aaKnown RBP26.91■■□□□ 1.9
DNMT1-216ENST00000588952 USP21Q9UK80 565 aa26.91■■□□□ 1.9
DNMT1-216ENST00000588952 EVA1CP58658 441 aa26.9■■□□□ 1.9
DNMT1-216ENST00000588952 FAM208AQ9UK61 1670 aaKnown RBP26.89■■□□□ 1.9
DNMT1-216ENST00000588952 CSB-PGBD3P0DP91 1061 aa26.89■■□□□ 1.9
DNMT1-216ENST00000588952 NBPF6Q5VWK0 638 aa26.88■■□□□ 1.89
DNMT1-216ENST00000588952 NBPF4Q96M43 638 aa26.88■■□□□ 1.89
DNMT1-216ENST00000588952 MRS2Q9HD23 443 aa26.88■■□□□ 1.89
DNMT1-216ENST00000588952 EYA1Q99502 592 aa26.87■■□□□ 1.89
DNMT1-216ENST00000588952 ATRNO75882 1429 aa26.86■■□□□ 1.89
DNMT1-216ENST00000588952 CRB1P82279 1406 aa26.86■■□□□ 1.89
DNMT1-216ENST00000588952 USHBP1Q8N6Y0 703 aa26.86■■□□□ 1.89
DNMT1-216ENST00000588952 CCER2I3L3R5 266 aa26.85■■□□□ 1.89
DNMT1-216ENST00000588952 TOM1L2Q6ZVM7 507 aa26.85■■□□□ 1.89
DNMT1-216ENST00000588952 NLRP2Q9NX02 1062 aa26.85■■□□□ 1.89
DNMT1-216ENST00000588952 IGSF1Q8N6C5 1336 aa26.85■■□□□ 1.89
DNMT1-216ENST00000588952 NCAPD2Q15021 1401 aa26.84■■□□□ 1.89
DNMT1-216ENST00000588952 VPS72Q15906 364 aa26.84■■□□□ 1.89
DNMT1-216ENST00000588952 RGS17Q9UGC6 210 aaPredicted RBP26.84■■□□□ 1.89
DNMT1-216ENST00000588952 U2SURPO15042 1029 aaKnown RBP26.82■■□□□ 1.88
DNMT1-216ENST00000588952 CARD10Q9BWT7 1032 aa26.82■■□□□ 1.88
DNMT1-216ENST00000588952 SPATA31A5Q5VU36 1347 aa26.82■■□□□ 1.88
DNMT1-216ENST00000588952 SPATA31A7Q8IWB4 1347 aa26.82■■□□□ 1.88
DNMT1-216ENST00000588952 AEBP1Q8IUX7 1158 aa26.81■■□□□ 1.88
DNMT1-216ENST00000588952 SPATA31A1Q5TZJ5 1347 aa26.81■■□□□ 1.88
DNMT1-216ENST00000588952 GLI3P10071 1580 aa26.8■■□□□ 1.88
DNMT1-216ENST00000588952 PNISRQ8TF01 805 aaKnown RBP26.79■■□□□ 1.88
DNMT1-216ENST00000588952 USP35Q9P2H5 1018 aa26.79■■□□□ 1.88
DNMT1-216ENST00000588952 NUDCQ9Y266 331 aa26.79■■□□□ 1.88
DNMT1-216ENST00000588952 HMOX1P09601 288 aa26.78■■□□□ 1.88
DNMT1-216ENST00000588952 QTRT2Q9H974 415 aaKnown RBP26.78■■□□□ 1.88
DNMT1-216ENST00000588952 TRPC5Q9UL62 973 aaPredicted RBP26.78■■□□□ 1.88
DNMT1-216ENST00000588952 CCDC9Q9Y3X0 531 aaKnown RBP26.78■■□□□ 1.88
DNMT1-216ENST00000588952 KDRP35968 1356 aa26.77■■□□□ 1.88
DNMT1-216ENST00000588952 U2AF1L5P0DN76 240 aaPredicted RBP26.77■■□□□ 1.88
DNMT1-216ENST00000588952 U2AF1Q01081 240 aaKnown RBP eCLIP26.77■■□□□ 1.887e-7■□□□□ 10.4
DNMT1-216ENST00000588952 ZNF772Q68DY9 489 aaPredicted RBP26.77■■□□□ 1.88
DNMT1-216ENST00000588952 SULT6B1Q6IMI4 303 aa26.77■■□□□ 1.88
DNMT1-216ENST00000588952 PHF23Q9BUL5 403 aaPredicted RBP26.76■■□□□ 1.87
DNMT1-216ENST00000588952 WNK3Q9BYP7 1800 aa26.76■■□□□ 1.87
DNMT1-216ENST00000588952 MEGF6O75095 1541 aa26.75■■□□□ 1.87
DNMT1-216ENST00000588952 DISP2A7MBM2 1401 aa26.74■■□□□ 1.87
DNMT1-216ENST00000588952 TCP11L2Q8N4U5 519 aa26.74■■□□□ 1.87
DNMT1-216ENST00000588952 GJD4Q96KN9 370 aaPredicted RBP26.74■■□□□ 1.87
DNMT1-216ENST00000588952 ADAMTS8Q9UP79 889 aa26.74■■□□□ 1.87
DNMT1-216ENST00000588952 WDR43Q15061 677 aaKnown RBP eCLIP26.73■■□□□ 1.87
DNMT1-216ENST00000588952 POTEAQ6S8J7 498 aa26.73■■□□□ 1.87
DNMT1-216ENST00000588952 RSPH6AQ9H0K4 717 aa26.73■■□□□ 1.87
DNMT1-216ENST00000588952 THRAP3Q9Y2W1 955 aaKnown RBP26.7■■□□□ 1.86
DNMT1-216ENST00000588952 FAM98CQ17RN3 349 aaKnown RBP26.69■■□□□ 1.86
DNMT1-216ENST00000588952 BARGINQ6ZT62 677 aa26.69■■□□□ 1.86
DNMT1-216ENST00000588952 PRKAR2BP31323 418 aa26.68■■□□□ 1.86
DNMT1-216ENST00000588952 FAM9BQ8IZU0 186 aa26.68■■□□□ 1.86
DNMT1-216ENST00000588952 THSD7AQ9UPZ6 1657 aa26.68■■□□□ 1.86
DNMT1-216ENST00000588952 PARP4Q9UKK3 1724 aaKnown RBP26.68■■□□□ 1.86
DNMT1-216ENST00000588952 FCHSD2O94868 740 aa26.67■■□□□ 1.86
DNMT1-216ENST00000588952 IL2RBP14784 551 aa26.67■■□□□ 1.86
DNMT1-216ENST00000588952 OVOS2A0A0G2JMS6 1433 aa26.66■■□□□ 1.86
DNMT1-216ENST00000588952 PLEKHF1Q96S99 279 aa26.66■■□□□ 1.86
DNMT1-216ENST00000588952 CCDC146Q8IYE0 955 aa26.65■■□□□ 1.86
DNMT1-216ENST00000588952 RAPGEF4Q8WZA2 1011 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms