RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 FKBP5Q13451 457 aaPredicted RBP9.25□□□□□ -0.93
LAMA3-210ENST00000588770 LRSAM1Q6UWE0 723 aa9.25□□□□□ -0.93
LAMA3-210ENST00000588770 C16orf45Q96MC5 204 aaPredicted RBP9.25□□□□□ -0.93
LAMA3-210ENST00000588770 PEG3Q9GZU2 1588 aa9.25□□□□□ -0.93
LAMA3-210ENST00000588770 SYCP1Q15431 976 aa9.25□□□□□ -0.93
LAMA3-210ENST00000588770 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.25□□□□□ -0.93
LAMA3-210ENST00000588770 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 PSMD2Q13200 908 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 TTC19Q6DKK2 380 aaPredicted RBP9.24□□□□□ -0.93
LAMA3-210ENST00000588770 ANKRD18AQ8IVF6 992 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 RINLQ6ZS11 566 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 SPC24Q8NBT2 197 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 CDCA7LQ96GN5 454 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.24□□□□□ -0.93
LAMA3-210ENST00000588770 GOLGA5Q8TBA6 731 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 PDLIM2Q96JY6 352 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 COG6Q9Y2V7 657 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 MTUS2Q5JR59 1369 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 A0A1B0GUA9 196 aa9.24□□□□□ -0.93
LAMA3-210ENST00000588770 PRPF38AQ8NAV1 312 aaKnown RBP9.24□□□□□ -0.93
LAMA3-210ENST00000588770 VEZTQ9HBM0 779 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 KIAA1328Q86T90 577 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 USP25Q9UHP3 1055 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 BAG4O95429 457 aaKnown RBP9.23□□□□□ -0.93
LAMA3-210ENST00000588770 SSFA2P28290 1259 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 ACRBPQ8NEB7 543 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 L3MBTL2Q969R5 705 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 SH3GL3Q99963 347 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 SEC24BO95487 1268 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 NCBP1Q09161 790 aaKnown RBP9.23□□□□□ -0.93
LAMA3-210ENST00000588770 RAB3GAP1Q15042 981 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 MUM1L1Q5H9M0 696 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 MFSD4BQ5TF39 518 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 NOL8Q76FK4 1167 aaKnown RBP9.23□□□□□ -0.93
LAMA3-210ENST00000588770 NLRP13Q86W25 1043 aa9.23□□□□□ -0.93
LAMA3-210ENST00000588770 IBSPP21815 317 aaPredicted RBP9.22□□□□□ -0.93
LAMA3-210ENST00000588770 GCKP35557 465 aa9.22□□□□□ -0.93
LAMA3-210ENST00000588770 EIF3JO75822 258 aaKnown RBP9.22□□□□□ -0.93
LAMA3-210ENST00000588770 WDR63Q8IWG1 891 aa9.22□□□□□ -0.93
LAMA3-210ENST00000588770 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
LAMA3-210ENST00000588770 IBTKQ9P2D0 1353 aaPredicted RBP9.22□□□□□ -0.93
LAMA3-210ENST00000588770 ADCY5O95622 1261 aa9.22□□□□□ -0.93
LAMA3-210ENST00000588770 GNL2Q13823 731 aaKnown RBP9.22□□□□□ -0.93
LAMA3-210ENST00000588770 HSP90B2PQ58FF3 399 aa9.22□□□□□ -0.93
LAMA3-210ENST00000588770 SRLQ86TD4 932 aa9.22□□□□□ -0.93
LAMA3-210ENST00000588770 POLKQ9UBT6 870 aa9.22□□□□□ -0.93
LAMA3-210ENST00000588770 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
LAMA3-210ENST00000588770 SF3A1Q15459 793 aaKnown RBP9.21□□□□□ -0.93
LAMA3-210ENST00000588770 SKIDA1Q1XH10 827 aa9.21□□□□□ -0.93
LAMA3-210ENST00000588770 NAIF1Q69YI7 327 aaPredicted RBP9.21□□□□□ -0.93
LAMA3-210ENST00000588770 CEP89Q96ST8 783 aa9.21□□□□□ -0.93
LAMA3-210ENST00000588770 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.21□□□□□ -0.93
LAMA3-210ENST00000588770 TPD52L2O43399 206 aaKnown RBP9.21□□□□□ -0.93
LAMA3-210ENST00000588770 KDM4AO75164 1064 aa9.21□□□□□ -0.93
LAMA3-210ENST00000588770 TMTC2Q8N394 836 aa9.21□□□□□ -0.93
LAMA3-210ENST00000588770 TRIM6Q9C030 488 aaPredicted RBP9.21□□□□□ -0.93
LAMA3-210ENST00000588770 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.21□□□□□ -0.94
LAMA3-210ENST00000588770 MYO6Q9UM54 1294 aa9.21□□□□□ -0.94
LAMA3-210ENST00000588770 FILIP1Q7Z7B0 1213 aa9.21□□□□□ -0.94
LAMA3-210ENST00000588770 MRFAP1L1Q96HT8 127 aa9.21□□□□□ -0.94
LAMA3-210ENST00000588770 UVSSAQ2YD98 709 aa9.2□□□□□ -0.94
LAMA3-210ENST00000588770 ERC1Q8IUD2 1116 aa9.2□□□□□ -0.94
LAMA3-210ENST00000588770 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
LAMA3-210ENST00000588770 PAF1Q8N7H5 531 aa9.2□□□□□ -0.94
LAMA3-210ENST00000588770 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.2□□□□□ -0.94
LAMA3-210ENST00000588770 RB1CC1Q8TDY2 1594 aa9.2□□□□□ -0.94
LAMA3-210ENST00000588770 TRAF1Q13077 416 aa9.2□□□□□ -0.94
LAMA3-210ENST00000588770 TBC1D22AQ8WUA7 517 aa9.2□□□□□ -0.94
LAMA3-210ENST00000588770 RBM5P52756 815 aaKnown RBP eCLIP9.2□□□□□ -0.94
LAMA3-210ENST00000588770 ETAA1Q9NY74 926 aa9.2□□□□□ -0.94
LAMA3-210ENST00000588770 CCDC7Q96M83 1385 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 FHAD1B1AJZ9 1412 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 CDR1P51861 262 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 NEDD9Q14511 834 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 KDM2BQ8NHM5 1336 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 NUTM1Q86Y26 1132 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 FBXO18Q8NFZ0 1043 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 CGNL1Q0VF96 1302 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 GOLGA6L19H0YKK7 550 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 ABCD1P33897 745 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 CLNS1AP54105 237 aaKnown RBP9.19□□□□□ -0.94
LAMA3-210ENST00000588770 DBN1Q16643 649 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 PNISRQ8TF01 805 aaKnown RBP9.19□□□□□ -0.94
LAMA3-210ENST00000588770 TACO1Q9BSH4 297 aaKnown RBP9.19□□□□□ -0.94
LAMA3-210ENST00000588770 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
LAMA3-210ENST00000588770 NEXNQ0ZGT2 675 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 NBPF8Q3BBV2 869 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 CEP135Q66GS9 1140 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 CCDC186Q7Z3E2 898 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 ITPRIPQ8IWB1 547 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 UBXN4Q92575 508 aa9.19□□□□□ -0.94
LAMA3-210ENST00000588770 KLHL33A6NCF5 533 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 K7ELQ4 463 aaPredicted RBP9.18□□□□□ -0.94
LAMA3-210ENST00000588770 RWDD2BP57060 319 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 NFXL1Q6ZNB6 911 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 CCDC146Q8IYE0 955 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 CHMP7Q8WUX9 453 aaPredicted RBP9.18□□□□□ -0.94
LAMA3-210ENST00000588770 BCL2L13Q9BXK5 485 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 APBB1O00213 710 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 MYBBP1AQ9BQG0 1328 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms