RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 GCP02774 474 aa11.4□□□□□ -0.58
NFIX-211ENST00000588680 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
NFIX-211ENST00000588680 FHDC1Q9C0D6 1143 aaPredicted RBP11.4□□□□□ -0.58
NFIX-211ENST00000588680 ATF5Q9Y2D1 282 aaPredicted RBP11.4□□□□□ -0.58
NFIX-211ENST00000588680 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
NFIX-211ENST00000588680 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
NFIX-211ENST00000588680 BCL9O00512 1426 aa11.39□□□□□ -0.59
NFIX-211ENST00000588680 DDB1Q16531 1140 aa11.39□□□□□ -0.59
NFIX-211ENST00000588680 PROM2Q8N271 834 aa11.39□□□□□ -0.59
NFIX-211ENST00000588680 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
NFIX-211ENST00000588680 BTAF1O14981 1849 aa11.39□□□□□ -0.59
NFIX-211ENST00000588680 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
NFIX-211ENST00000588680 TUBGCP6Q96RT7 1819 aa11.38□□□□□ -0.59
NFIX-211ENST00000588680 C1QTNF8P60827 252 aa11.38□□□□□ -0.59
NFIX-211ENST00000588680 NLRP13Q86W25 1043 aa11.38□□□□□ -0.59
NFIX-211ENST00000588680 SYT17Q9BSW7 474 aa11.38□□□□□ -0.59
NFIX-211ENST00000588680 STK32BQ9NY57 414 aa11.38□□□□□ -0.59
NFIX-211ENST00000588680 GOLGB1Q14789 3259 aaKnown RBP11.38□□□□□ -0.59
NFIX-211ENST00000588680 CPSF1Q10570 1443 aaKnown RBP11.37□□□□□ -0.59
NFIX-211ENST00000588680 MARCH10Q8NA82 808 aaPredicted RBP11.37□□□□□ -0.59
NFIX-211ENST00000588680 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
NFIX-211ENST00000588680 RAB3GAP2Q9H2M9 1393 aa11.37□□□□□ -0.59
NFIX-211ENST00000588680 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
NFIX-211ENST00000588680 USP6P35125 1406 aa11.36□□□□□ -0.59
NFIX-211ENST00000588680 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
NFIX-211ENST00000588680 TXNRD1Q16881 649 aa11.36□□□□□ -0.59
NFIX-211ENST00000588680 TOM1L2Q6ZVM7 507 aa11.36□□□□□ -0.59
NFIX-211ENST00000588680 SGIP1Q9BQI5 828 aa11.36□□□□□ -0.59
NFIX-211ENST00000588680 MTFR1LQ9H019 292 aa11.36□□□□□ -0.59
NFIX-211ENST00000588680 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
NFIX-211ENST00000588680 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
NFIX-211ENST00000588680 ABCC6O95255 1503 aa11.35□□□□□ -0.59
NFIX-211ENST00000588680 COL24A1Q17RW2 1714 aa11.35□□□□□ -0.59
NFIX-211ENST00000588680 SLC15A2Q16348 729 aa11.35□□□□□ -0.59
NFIX-211ENST00000588680 BRD4O60885 1362 aaPredicted RBP11.35□□□□□ -0.59
NFIX-211ENST00000588680 MAP3K5Q99683 1374 aa11.35□□□□□ -0.59
NFIX-211ENST00000588680 NLRP6P59044 892 aa11.33□□□□□ -0.6
NFIX-211ENST00000588680 SRPK2P78362 688 aaKnown RBP11.33□□□□□ -0.6
NFIX-211ENST00000588680 IFFO2Q5TF58 517 aa11.33□□□□□ -0.6
NFIX-211ENST00000588680 NFAT5O94916 1531 aa11.33□□□□□ -0.6
NFIX-211ENST00000588680 LTN1O94822 1766 aa11.33□□□□□ -0.6
NFIX-211ENST00000588680 STAC3Q96MF2 364 aa11.32□□□□□ -0.6
NFIX-211ENST00000588680 ARXQ96QS3 562 aa11.32□□□□□ -0.6
NFIX-211ENST00000588680 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
NFIX-211ENST00000588680 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
NFIX-211ENST00000588680 AXIN2Q9Y2T1 843 aa11.32□□□□□ -0.6
NFIX-211ENST00000588680 GIGYF1O75420 1035 aaPredicted RBP11.31□□□□□ -0.6
NFIX-211ENST00000588680 MON2Q7Z3U7 1717 aa11.3□□□□□ -0.6
NFIX-211ENST00000588680 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
NFIX-211ENST00000588680 CARD10Q9BWT7 1032 aa11.3□□□□□ -0.6
NFIX-211ENST00000588680 CENPJQ9HC77 1338 aaPredicted RBP11.3□□□□□ -0.6
NFIX-211ENST00000588680 GPR162Q16538 588 aa11.29□□□□□ -0.6
NFIX-211ENST00000588680 ZNF827Q17R98 1081 aa11.29□□□□□ -0.6
NFIX-211ENST00000588680 USP54Q70EL1 1684 aa11.29□□□□□ -0.6
NFIX-211ENST00000588680 CCDC7Q96M83 1385 aa11.28□□□□□ -0.6
NFIX-211ENST00000588680 SOX12O15370 315 aa11.28□□□□□ -0.6
NFIX-211ENST00000588680 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
NFIX-211ENST00000588680 ACSBG1Q96GR2 724 aa11.28□□□□□ -0.6
NFIX-211ENST00000588680 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
NFIX-211ENST00000588680 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
NFIX-211ENST00000588680 EXOC5O00471 708 aa11.27□□□□□ -0.61
NFIX-211ENST00000588680 NBPF1Q3BBV0 1214 aa11.27□□□□□ -0.61
NFIX-211ENST00000588680 ARHGEF25Q86VW2 580 aa11.27□□□□□ -0.61
NFIX-211ENST00000588680 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
NFIX-211ENST00000588680 LY75O60449 1722 aa11.26□□□□□ -0.61
NFIX-211ENST00000588680 KCNH5Q8NCM2 988 aa11.25□□□□□ -0.61
NFIX-211ENST00000588680 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
NFIX-211ENST00000588680 LRRC4BQ9NT99 713 aa11.24□□□□□ -0.61
NFIX-211ENST00000588680 TTC21BQ7Z4L5 1316 aa11.24□□□□□ -0.61
NFIX-211ENST00000588680 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
NFIX-211ENST00000588680 ERBB3P21860 1342 aa11.22□□□□□ -0.61
NFIX-211ENST00000588680 POLD1P28340 1107 aa11.22□□□□□ -0.61
NFIX-211ENST00000588680 PNPLA7Q6ZV29 1317 aa11.22□□□□□ -0.61
NFIX-211ENST00000588680 TTC21AQ8NDW8 1320 aa11.22□□□□□ -0.61
NFIX-211ENST00000588680 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
NFIX-211ENST00000588680 ATP10DQ9P241 1426 aa11.22□□□□□ -0.61
NFIX-211ENST00000588680 YBX3P16989 372 aaKnown RBP eCLIP11.21□□□□□ -0.61
NFIX-211ENST00000588680 NLRP2Q9NX02 1062 aa11.21□□□□□ -0.61
NFIX-211ENST00000588680 RGPD2P0DJD1 1756 aa11.21□□□□□ -0.62
NFIX-211ENST00000588680 C5P01031 1676 aa11.2□□□□□ -0.62
NFIX-211ENST00000588680 EVC2Q86UK5 1308 aa11.2□□□□□ -0.62
NFIX-211ENST00000588680 IL2RBP14784 551 aa11.2□□□□□ -0.62
NFIX-211ENST00000588680 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
NFIX-211ENST00000588680 KTN1Q86UP2 1357 aaKnown RBP11.19□□□□□ -0.62
NFIX-211ENST00000588680 TAF1LQ8IZX4 1826 aa11.19□□□□□ -0.62
NFIX-211ENST00000588680 KCNQ4P56696 695 aa11.18□□□□□ -0.62
NFIX-211ENST00000588680 SLC27A3Q5K4L6 730 aa11.18□□□□□ -0.62
NFIX-211ENST00000588680 TFCP2L1Q9NZI6 479 aa11.18□□□□□ -0.62
NFIX-211ENST00000588680 ADCY9O60503 1353 aa11.17□□□□□ -0.62
NFIX-211ENST00000588680 ZNF692Q9BU19 519 aaPredicted RBP11.17□□□□□ -0.62
NFIX-211ENST00000588680 NSD2O96028 1365 aa11.16□□□□□ -0.62
NFIX-211ENST00000588680 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
NFIX-211ENST00000588680 GRIN3BO60391 1043 aa11.16□□□□□ -0.62
NFIX-211ENST00000588680 ANKRD24Q8TF21 1146 aa11.16□□□□□ -0.62
NFIX-211ENST00000588680 CD163L1Q9NR16 1453 aa11.16□□□□□ -0.62
NFIX-211ENST00000588680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.15□□□□□ -0.62
NFIX-211ENST00000588680 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.63
NFIX-211ENST00000588680 ANKRD36BQ8N2N9 1353 aa11.15□□□□□ -0.63
NFIX-211ENST00000588680 HSPA6P17066 643 aa11.14□□□□□ -0.63
NFIX-211ENST00000588680 MSL1Q68DK7 614 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms