RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 NME9Q86XW9 330 aa29.4■■■□□ 2.3
NCLN-204ENST00000588428 A0A0G2JS52 829 aa29.39■■■□□ 2.3
NCLN-204ENST00000588428 MYT1Q01538 1121 aa29.39■■■□□ 2.3
NCLN-204ENST00000588428 THRAP3Q9Y2W1 955 aaKnown RBP29.39■■■□□ 2.3
NCLN-204ENST00000588428 PARP4Q9UKK3 1724 aaKnown RBP29.39■■■□□ 2.3
NCLN-204ENST00000588428 MYOM1P52179 1685 aa29.37■■■□□ 2.29
NCLN-204ENST00000588428 WNK3Q9BYP7 1800 aa29.37■■■□□ 2.29
NCLN-204ENST00000588428 TCP11L2Q8N4U5 519 aa29.37■■■□□ 2.29
NCLN-204ENST00000588428 ZRANB1Q9UGI0 708 aa29.36■■■□□ 2.29
NCLN-204ENST00000588428 AXIN2Q9Y2T1 843 aa29.34■■■□□ 2.29
NCLN-204ENST00000588428 ZBTB7CA1YPR0 619 aa29.33■■■□□ 2.29
NCLN-204ENST00000588428 WDR17Q8IZU2 1322 aa29.33■■■□□ 2.29
NCLN-204ENST00000588428 RGPD1P0DJD0 1748 aa29.33■■■□□ 2.29
NCLN-204ENST00000588428 USP35Q9P2H5 1018 aa29.32■■■□□ 2.28
NCLN-204ENST00000588428 SOX12O15370 315 aa29.31■■■□□ 2.28
NCLN-204ENST00000588428 KIF20BQ96Q89 1820 aa29.29■■■□□ 2.28
NCLN-204ENST00000588428 TNS1Q9HBL0 1735 aaKnown RBP29.27■■■□□ 2.28
NCLN-204ENST00000588428 LRRC37A3O60309 1634 aa29.27■■■□□ 2.28
NCLN-204ENST00000588428 EIF4G2P78344 907 aaKnown RBP eCLIP29.26■■■□□ 2.27
NCLN-204ENST00000588428 TOM1L2Q6ZVM7 507 aa29.26■■■□□ 2.27
NCLN-204ENST00000588428 SF3B2Q13435 895 aaKnown RBP29.25■■■□□ 2.27
NCLN-204ENST00000588428 COG3Q96JB2 828 aa29.23■■■□□ 2.27
NCLN-204ENST00000588428 CARD10Q9BWT7 1032 aa29.23■■■□□ 2.27
NCLN-204ENST00000588428 FAM208AQ9UK61 1670 aaKnown RBP29.22■■■□□ 2.27
NCLN-204ENST00000588428 FAM196AQ6ZSG2 479 aa29.22■■■□□ 2.27
NCLN-204ENST00000588428 ERBB3P21860 1342 aa29.21■■■□□ 2.27
NCLN-204ENST00000588428 CDCA7Q9BWT1 371 aaPredicted RBP29.21■■■□□ 2.27
NCLN-204ENST00000588428 CCDC7Q96M83 1385 aa29.21■■■□□ 2.27
NCLN-204ENST00000588428 DISP2A7MBM2 1401 aa29.2■■■□□ 2.27
NCLN-204ENST00000588428 PEAK1Q9H792 1746 aa29.2■■■□□ 2.27
NCLN-204ENST00000588428 PDE3BQ13370 1112 aa29.2■■■□□ 2.26
NCLN-204ENST00000588428 FYB1O15117 783 aa29.19■■■□□ 2.26
NCLN-204ENST00000588428 HSPA5P11021 654 aaKnown RBP29.19■■■□□ 2.26
NCLN-204ENST00000588428 FAM182BQ5T319 152 aa29.19■■■□□ 2.26
NCLN-204ENST00000588428 CSB-PGBD3P0DP91 1061 aa29.18■■■□□ 2.26
NCLN-204ENST00000588428 C11orf95C9JLR9 678 aaPredicted RBP29.17■■■□□ 2.26
NCLN-204ENST00000588428 DEFB132Q7Z7B7 95 aa29.17■■■□□ 2.26
NCLN-204ENST00000588428 SBF2Q86WG5 1849 aa29.16■■■□□ 2.26
NCLN-204ENST00000588428 IP6K1Q92551 441 aa29.16■■■□□ 2.26
NCLN-204ENST00000588428 BAG6P46379 1132 aa29.15■■■□□ 2.26
NCLN-204ENST00000588428 NSD3Q9BZ95 1437 aa29.14■■■□□ 2.26
NCLN-204ENST00000588428 CARD14Q9BXL6 1004 aa29.14■■■□□ 2.26
NCLN-204ENST00000588428 RTL1A6NKG5 1358 aa29.13■■■□□ 2.25
NCLN-204ENST00000588428 OVOS2A0A0G2JMS6 1433 aa29.13■■■□□ 2.25
NCLN-204ENST00000588428 DDB1Q16531 1140 aa29.13■■■□□ 2.25
NCLN-204ENST00000588428 MAP3K19Q56UN5 1328 aa29.13■■■□□ 2.25
NCLN-204ENST00000588428 GGNBP2Q9H3C7 697 aa29.12■■■□□ 2.25
NCLN-204ENST00000588428 ANKRD24Q8TF21 1146 aa29.11■■■□□ 2.25
NCLN-204ENST00000588428 BCL9O00512 1426 aa29.11■■■□□ 2.25
NCLN-204ENST00000588428 ANKRD26Q9UPS8 1709 aa29.09■■■□□ 2.25
NCLN-204ENST00000588428 TNS2Q63HR2 1409 aa29.08■■■□□ 2.25
NCLN-204ENST00000588428 TRIM37O94972 964 aa29.07■■■□□ 2.24
NCLN-204ENST00000588428 HOXC9P31274 260 aa29.07■■■□□ 2.24
NCLN-204ENST00000588428 KIF24Q5T7B8 1368 aa29.07■■■□□ 2.24
NCLN-204ENST00000588428 NLRP2Q9NX02 1062 aa29.06■■■□□ 2.24
NCLN-204ENST00000588428 PARD3Q8TEW0 1356 aa29.05■■■□□ 2.24
NCLN-204ENST00000588428 AMPHP49418 695 aa29.05■■■□□ 2.24
NCLN-204ENST00000588428 RGPD3A6NKT7 1758 aaPredicted RBP29.05■■■□□ 2.24
NCLN-204ENST00000588428 RGPD2P0DJD1 1756 aa29.05■■■□□ 2.24
NCLN-204ENST00000588428 RGPD4Q7Z3J3 1758 aa29.05■■■□□ 2.24
NCLN-204ENST00000588428 CGNL1Q0VF96 1302 aa29.04■■■□□ 2.24
NCLN-204ENST00000588428 RREB1Q92766 1687 aa29.04■■■□□ 2.24
NCLN-204ENST00000588428 FBLN1P23142 703 aa29.03■■■□□ 2.24
NCLN-204ENST00000588428 EN1Q05925 392 aaPredicted RBP29.03■■■□□ 2.24
NCLN-204ENST00000588428 MARCH10Q8NA82 808 aaPredicted RBP29.02■■■□□ 2.24
NCLN-204ENST00000588428 EXOC5O00471 708 aa29.01■■■□□ 2.23
NCLN-204ENST00000588428 IL2RBP14784 551 aa29.01■■■□□ 2.23
NCLN-204ENST00000588428 RRS1Q15050 365 aaKnown RBP29.01■■■□□ 2.23
NCLN-204ENST00000588428 MAP2P11137 1827 aaKnown RBP29.01■■■□□ 2.23
NCLN-204ENST00000588428 CAMKK2Q96RR4 588 aa28.99■■■□□ 2.23
NCLN-204ENST00000588428 POLR3GLQ9BT43 218 aa28.99■■■□□ 2.23
NCLN-204ENST00000588428 FLT4P35916 1363 aa28.99■■■□□ 2.23
NCLN-204ENST00000588428 APBA3O96018 575 aa28.98■■■□□ 2.23
NCLN-204ENST00000588428 INSRP06213 1382 aa28.98■■■□□ 2.23
NCLN-204ENST00000588428 LTV1Q96GA3 475 aaPredicted RBP28.96■■■□□ 2.23
NCLN-204ENST00000588428 NUP188Q5SRE5 1749 aa28.96■■■□□ 2.23
NCLN-204ENST00000588428 SMG6Q86US8 1419 aaKnown RBP28.95■■■□□ 2.23
NCLN-204ENST00000588428 NHSQ6T4R5 1651 aa28.94■■■□□ 2.22
NCLN-204ENST00000588428 EZH2Q15910 746 aaKnown RBP28.94■■■□□ 2.22
NCLN-204ENST00000588428 NSD2O96028 1365 aa28.93■■■□□ 2.22
NCLN-204ENST00000588428 BCL11BQ9C0K0 894 aaPredicted RBP28.93■■■□□ 2.22
NCLN-204ENST00000588428 PANK3Q9H999 370 aa28.93■■■□□ 2.22
NCLN-204ENST00000588428 SHANK3Q9BYB0 1731 aa28.92■■■□□ 2.22
NCLN-204ENST00000588428 PLSCR1O15162 318 aa28.89■■■□□ 2.22
NCLN-204ENST00000588428 HSP90AB2PQ58FF8 381 aa28.89■■■□□ 2.22
NCLN-204ENST00000588428 KIF7Q2M1P5 1343 aa28.89■■■□□ 2.21
NCLN-204ENST00000588428 EMILIN1Q9Y6C2 1016 aa28.88■■■□□ 2.21
NCLN-204ENST00000588428 NBPF6Q5VWK0 638 aa28.87■■■□□ 2.21
NCLN-204ENST00000588428 NBPF4Q96M43 638 aa28.87■■■□□ 2.21
NCLN-204ENST00000588428 MEGF6O75095 1541 aa28.87■■■□□ 2.21
NCLN-204ENST00000588428 NCAPD2Q15021 1401 aa28.86■■■□□ 2.21
NCLN-204ENST00000588428 KAT6BQ8WYB5 2073 aa28.86■■■□□ 2.21
NCLN-204ENST00000588428 WASHC2AQ641Q2 1341 aa28.86■■■□□ 2.21
NCLN-204ENST00000588428 LRP5O75197 1615 aa28.83■■■□□ 2.21
NCLN-204ENST00000588428 PTF1AQ7RTS3 328 aa28.83■■■□□ 2.21
NCLN-204ENST00000588428 POLKQ9UBT6 870 aa28.83■■■□□ 2.21
NCLN-204ENST00000588428 BTAF1O14981 1849 aa28.83■■■□□ 2.21
NCLN-204ENST00000588428 KNSTRNQ9Y448 316 aa28.79■■■□□ 2.2
NCLN-204ENST00000588428 PKD1L3Q7Z443 1732 aa28.79■■■□□ 2.2
NCLN-204ENST00000588428 DOT1LQ8TEK3 1739 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms