RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 AXIN2Q9Y2T1 843 aa22.24■■□□□ 1.15
RETREG3-206ENST00000588423 THRAP3Q9Y2W1 955 aaKnown RBP22.24■■□□□ 1.15
RETREG3-206ENST00000588423 CRB1P82279 1406 aa22.23■■□□□ 1.15
RETREG3-206ENST00000588423 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
RETREG3-206ENST00000588423 BARGINQ6ZT62 677 aa22.23■■□□□ 1.15
RETREG3-206ENST00000588423 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
RETREG3-206ENST00000588423 POLR3GLQ9BT43 218 aa22.22■■□□□ 1.15
RETREG3-206ENST00000588423 C11orf95C9JLR9 678 aaPredicted RBP22.21■■□□□ 1.15
RETREG3-206ENST00000588423 TCP11L2Q8N4U5 519 aa22.21■■□□□ 1.15
RETREG3-206ENST00000588423 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
RETREG3-206ENST00000588423 KIF20BQ96Q89 1820 aa22.2■■□□□ 1.14
RETREG3-206ENST00000588423 KRT27Q7Z3Y8 459 aa22.19■■□□□ 1.14
RETREG3-206ENST00000588423 GGNBP2Q9H3C7 697 aa22.19■■□□□ 1.14
RETREG3-206ENST00000588423 LTN1O94822 1766 aa22.19■■□□□ 1.14
RETREG3-206ENST00000588423 BRWD3Q6RI45 1802 aa22.18■■□□□ 1.14
RETREG3-206ENST00000588423 A0A0G2JS52 829 aa22.18■■□□□ 1.14
RETREG3-206ENST00000588423 MYT1Q01538 1121 aa22.18■■□□□ 1.14
RETREG3-206ENST00000588423 USP35Q9P2H5 1018 aa22.18■■□□□ 1.14
RETREG3-206ENST00000588423 BLMP54132 1417 aaPredicted RBP22.17■■□□□ 1.14
RETREG3-206ENST00000588423 CGNL1Q0VF96 1302 aa22.17■■□□□ 1.14
RETREG3-206ENST00000588423 TOM1L2Q6ZVM7 507 aa22.17■■□□□ 1.14
RETREG3-206ENST00000588423 KIF7Q2M1P5 1343 aa22.16■■□□□ 1.14
RETREG3-206ENST00000588423 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
RETREG3-206ENST00000588423 ERBB3P21860 1342 aa22.15■■□□□ 1.14
RETREG3-206ENST00000588423 IP6K1Q92551 441 aa22.15■■□□□ 1.14
RETREG3-206ENST00000588423 CARD10Q9BWT7 1032 aa22.15■■□□□ 1.14
RETREG3-206ENST00000588423 PANK3Q9H999 370 aa22.15■■□□□ 1.14
RETREG3-206ENST00000588423 MAP3K19Q56UN5 1328 aa22.14■■□□□ 1.14
RETREG3-206ENST00000588423 CCDC125Q86Z20 511 aa22.14■■□□□ 1.13
RETREG3-206ENST00000588423 RTL1A6NKG5 1358 aa22.13■■□□□ 1.13
RETREG3-206ENST00000588423 CSB-PGBD3P0DP91 1061 aa22.13■■□□□ 1.13
RETREG3-206ENST00000588423 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
RETREG3-206ENST00000588423 ANKRD24Q8TF21 1146 aa22.11■■□□□ 1.13
RETREG3-206ENST00000588423 CDCA7Q9BWT1 371 aaPredicted RBP22.11■■□□□ 1.13
RETREG3-206ENST00000588423 PARP4Q9UKK3 1724 aaKnown RBP22.11■■□□□ 1.13
RETREG3-206ENST00000588423 KIF24Q5T7B8 1368 aa22.11■■□□□ 1.13
RETREG3-206ENST00000588423 FBLN1P23142 703 aa22.1■■□□□ 1.13
RETREG3-206ENST00000588423 HOXC9P31274 260 aa22.1■■□□□ 1.13
RETREG3-206ENST00000588423 AMPHP49418 695 aa22.1■■□□□ 1.13
RETREG3-206ENST00000588423 NSD2O96028 1365 aa22.1■■□□□ 1.13
RETREG3-206ENST00000588423 RRS1Q15050 365 aaKnown RBP22.08■■□□□ 1.13
RETREG3-206ENST00000588423 DISP2A7MBM2 1401 aa22.07■■□□□ 1.12
RETREG3-206ENST00000588423 PDE3BQ13370 1112 aa22.07■■□□□ 1.12
RETREG3-206ENST00000588423 WNK3Q9BYP7 1800 aa22.07■■□□□ 1.12
RETREG3-206ENST00000588423 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
RETREG3-206ENST00000588423 ANKRD26Q9UPS8 1709 aa22.06■■□□□ 1.12
RETREG3-206ENST00000588423 FLT4P35916 1363 aa22.05■■□□□ 1.12
RETREG3-206ENST00000588423 NLRP2Q9NX02 1062 aa22.05■■□□□ 1.12
RETREG3-206ENST00000588423 KNSTRNQ9Y448 316 aa22.05■■□□□ 1.12
RETREG3-206ENST00000588423 LRRC37A3O60309 1634 aa22.05■■□□□ 1.12
RETREG3-206ENST00000588423 EP400Q96L91 3159 aa22.05■■□□□ 1.12
RETREG3-206ENST00000588423 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
RETREG3-206ENST00000588423 FAM196AQ6ZSG2 479 aa22.04■■□□□ 1.12
RETREG3-206ENST00000588423 INSRP06213 1382 aa22.03■■□□□ 1.12
RETREG3-206ENST00000588423 DDB1Q16531 1140 aa22.03■■□□□ 1.12
RETREG3-206ENST00000588423 PEAK1Q9H792 1746 aa22.01■■□□□ 1.11
RETREG3-206ENST00000588423 SMG6Q86US8 1419 aaKnown RBP22.01■■□□□ 1.11
RETREG3-206ENST00000588423 FAM182BQ5T319 152 aa22.01■■□□□ 1.11
RETREG3-206ENST00000588423 SF3B2Q13435 895 aaKnown RBP22■■□□□ 1.11
RETREG3-206ENST00000588423 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
RETREG3-206ENST00000588423 EMILIN1Q9Y6C2 1016 aa22■■□□□ 1.11
RETREG3-206ENST00000588423 PER1O15534 1290 aaPredicted RBP21.99■■□□□ 1.11
RETREG3-206ENST00000588423 IL2RBP14784 551 aa21.99■■□□□ 1.11
RETREG3-206ENST00000588423 AMER1Q5JTC6 1135 aaPredicted RBP21.99■■□□□ 1.11
RETREG3-206ENST00000588423 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
RETREG3-206ENST00000588423 EXOC5O00471 708 aa21.98■■□□□ 1.11
RETREG3-206ENST00000588423 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
RETREG3-206ENST00000588423 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
RETREG3-206ENST00000588423 TNS2Q63HR2 1409 aa21.97■■□□□ 1.11
RETREG3-206ENST00000588423 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
RETREG3-206ENST00000588423 BCL9O00512 1426 aa21.97■■□□□ 1.11
RETREG3-206ENST00000588423 MORC1Q86VD1 984 aa21.96■■□□□ 1.11
RETREG3-206ENST00000588423 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
RETREG3-206ENST00000588423 NBPF6Q5VWK0 638 aa21.94■■□□□ 1.1
RETREG3-206ENST00000588423 MARCH10Q8NA82 808 aaPredicted RBP21.94■■□□□ 1.1
RETREG3-206ENST00000588423 NBPF4Q96M43 638 aa21.94■■□□□ 1.1
RETREG3-206ENST00000588423 NPC1L1Q9UHC9 1359 aa21.94■■□□□ 1.1
RETREG3-206ENST00000588423 PPM1GO15355 546 aaPredicted RBP21.93■■□□□ 1.1
RETREG3-206ENST00000588423 TNNT2P45379 298 aaPredicted RBP21.93■■□□□ 1.1
RETREG3-206ENST00000588423 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
RETREG3-206ENST00000588423 BAG6P46379 1132 aa21.92■■□□□ 1.1
RETREG3-206ENST00000588423 TRIM37O94972 964 aa21.91■■□□□ 1.1
RETREG3-206ENST00000588423 NCAPD2Q15021 1401 aa21.9■■□□□ 1.1
RETREG3-206ENST00000588423 RGPD2P0DJD1 1756 aa21.9■■□□□ 1.1
RETREG3-206ENST00000588423 DEFB132Q7Z7B7 95 aa21.9■■□□□ 1.1
RETREG3-206ENST00000588423 ZEB1P37275 1124 aaPredicted RBP21.88■■□□□ 1.09
RETREG3-206ENST00000588423 MEGF6O75095 1541 aa21.87■■□□□ 1.09
RETREG3-206ENST00000588423 USHBP1Q8N6Y0 703 aa21.86■■□□□ 1.09
RETREG3-206ENST00000588423 RAPGEF4Q8WZA2 1011 aa21.86■■□□□ 1.09
RETREG3-206ENST00000588423 APBA3O96018 575 aa21.85■■□□□ 1.09
RETREG3-206ENST00000588423 EIF4A2Q14240 407 aaKnown RBP21.85■■□□□ 1.09
RETREG3-206ENST00000588423 BCL11BQ9C0K0 894 aaPredicted RBP21.85■■□□□ 1.09
RETREG3-206ENST00000588423 PARD3Q8TEW0 1356 aa21.85■■□□□ 1.09
RETREG3-206ENST00000588423 TATP17735 454 aaPredicted RBP21.84■■□□□ 1.09
RETREG3-206ENST00000588423 CC2D1BQ5T0F9 858 aaKnown RBP21.84■■□□□ 1.09
RETREG3-206ENST00000588423 ZCRB1Q8TBF4 217 aaKnown RBP21.84■■□□□ 1.09
RETREG3-206ENST00000588423 EYA1Q99502 592 aa21.84■■□□□ 1.09
RETREG3-206ENST00000588423 SBF2Q86WG5 1849 aa21.84■■□□□ 1.09
RETREG3-206ENST00000588423 EN1Q05925 392 aaPredicted RBP21.83■■□□□ 1.09
RETREG3-206ENST00000588423 CAMKK2Q96RR4 588 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms