RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 PDE3BQ13370 1112 aa27.31■■□□□ 1.96
TPM4-208ENST00000588410 FAM182BQ5T319 152 aa27.31■■□□□ 1.96
TPM4-208ENST00000588410 MON2Q7Z3U7 1717 aa27.3■■□□□ 1.96
TPM4-208ENST00000588410 BRWD3Q6RI45 1802 aa27.3■■□□□ 1.96
TPM4-208ENST00000588410 THSD7AQ9UPZ6 1657 aa27.28■■□□□ 1.96
TPM4-208ENST00000588410 WDR17Q8IZU2 1322 aa27.28■■□□□ 1.96
TPM4-208ENST00000588410 ANKRD36BQ8N2N9 1353 aa27.27■■□□□ 1.96
TPM4-208ENST00000588410 FAM196AQ6ZSG2 479 aa27.26■■□□□ 1.95
TPM4-208ENST00000588410 DEFB132Q7Z7B7 95 aa27.26■■□□□ 1.95
TPM4-208ENST00000588410 NFAT5O94916 1531 aa27.26■■□□□ 1.95
TPM4-208ENST00000588410 BAG6P46379 1132 aa27.25■■□□□ 1.95
TPM4-208ENST00000588410 COG3Q96JB2 828 aa27.25■■□□□ 1.95
TPM4-208ENST00000588410 EP400Q96L91 3159 aa27.23■■□□□ 1.95
TPM4-208ENST00000588410 CARD10Q9BWT7 1032 aa27.21■■□□□ 1.95
TPM4-208ENST00000588410 OVOS2A0A0J9YW53 1432 aa27.21■■□□□ 1.95
TPM4-208ENST00000588410 OVOS2Q6IE36 1432 aa27.21■■□□□ 1.95
TPM4-208ENST00000588410 EIF4G2P78344 907 aaKnown RBP eCLIP27.2■■□□□ 1.943e-9■■■□□ 15.5
TPM4-208ENST00000588410 CDCA7Q9BWT1 371 aaPredicted RBP27.2■■□□□ 1.94
TPM4-208ENST00000588410 TRIM37O94972 964 aa27.18■■□□□ 1.94
TPM4-208ENST00000588410 DDB1Q16531 1140 aa27.18■■□□□ 1.94
TPM4-208ENST00000588410 COL18A1P39060 1754 aa27.17■■□□□ 1.94
TPM4-208ENST00000588410 ABCC6O95255 1503 aa27.17■■□□□ 1.94
TPM4-208ENST00000588410 POLR3GLQ9BT43 218 aa27.16■■□□□ 1.94
TPM4-208ENST00000588410 NLRP2Q9NX02 1062 aa27.16■■□□□ 1.94
TPM4-208ENST00000588410 CCDC7Q96M83 1385 aa27.15■■□□□ 1.94
TPM4-208ENST00000588410 C11orf95C9JLR9 678 aaPredicted RBP27.15■■□□□ 1.94
TPM4-208ENST00000588410 ERBB3P21860 1342 aa27.15■■□□□ 1.94
TPM4-208ENST00000588410 USP54Q70EL1 1684 aa27.14■■□□□ 1.94
TPM4-208ENST00000588410 HSPA5P11021 654 aaKnown RBP27.14■■□□□ 1.94
TPM4-208ENST00000588410 ANKRD24Q8TF21 1146 aa27.14■■□□□ 1.94
TPM4-208ENST00000588410 GGNBP2Q9H3C7 697 aa27.14■■□□□ 1.94
TPM4-208ENST00000588410 FYB1O15117 783 aa27.13■■□□□ 1.93
TPM4-208ENST00000588410 EN1Q05925 392 aaPredicted RBP27.13■■□□□ 1.93
TPM4-208ENST00000588410 IP6K1Q92551 441 aa27.12■■□□□ 1.93
TPM4-208ENST00000588410 APBA3O96018 575 aa27.11■■□□□ 1.93
TPM4-208ENST00000588410 AMPHP49418 695 aa27.11■■□□□ 1.93
TPM4-208ENST00000588410 EXOC5O00471 708 aa27.09■■□□□ 1.93
TPM4-208ENST00000588410 LTV1Q96GA3 475 aaPredicted RBP27.09■■□□□ 1.93
TPM4-208ENST00000588410 MAP3K19Q56UN5 1328 aa27.09■■□□□ 1.93
TPM4-208ENST00000588410 OVOS2A0A0G2JMS6 1433 aa27.07■■□□□ 1.92
TPM4-208ENST00000588410 FBLN1P23142 703 aa27.07■■□□□ 1.92
TPM4-208ENST00000588410 CARD14Q9BXL6 1004 aa27.07■■□□□ 1.92
TPM4-208ENST00000588410 DISP2A7MBM2 1401 aa27.07■■□□□ 1.92
TPM4-208ENST00000588410 PARP4Q9UKK3 1724 aaKnown RBP27.06■■□□□ 1.92
TPM4-208ENST00000588410 NSD3Q9BZ95 1437 aa27.06■■□□□ 1.92
TPM4-208ENST00000588410 RGPD1P0DJD0 1748 aa27.05■■□□□ 1.92
TPM4-208ENST00000588410 HOXC9P31274 260 aa27.05■■□□□ 1.92
TPM4-208ENST00000588410 IL2RBP14784 551 aa27.04■■□□□ 1.92
TPM4-208ENST00000588410 RRS1Q15050 365 aaKnown RBP27.04■■□□□ 1.92
TPM4-208ENST00000588410 EZH2Q15910 746 aaKnown RBP27.04■■□□□ 1.92
TPM4-208ENST00000588410 MARCH10Q8NA82 808 aaPredicted RBP27.04■■□□□ 1.92
TPM4-208ENST00000588410 CAMKK2Q96RR4 588 aa27.02■■□□□ 1.92
TPM4-208ENST00000588410 CGNL1Q0VF96 1302 aa27.01■■□□□ 1.91
TPM4-208ENST00000588410 LRRC37A3O60309 1634 aa27.01■■□□□ 1.91
TPM4-208ENST00000588410 RTL1A6NKG5 1358 aa27■■□□□ 1.91
TPM4-208ENST00000588410 RGPD5Q99666 1765 aa27■■□□□ 1.91
TPM4-208ENST00000588410 LTN1O94822 1766 aa26.99■■□□□ 1.91
TPM4-208ENST00000588410 PARD3Q8TEW0 1356 aa26.99■■□□□ 1.91
TPM4-208ENST00000588410 TNS2Q63HR2 1409 aa26.98■■□□□ 1.91
TPM4-208ENST00000588410 BCL11BQ9C0K0 894 aaPredicted RBP26.97■■□□□ 1.91
TPM4-208ENST00000588410 MYOM1P52179 1685 aa26.95■■□□□ 1.91
TPM4-208ENST00000588410 PSDA5PKW4 1024 aaPredicted RBP26.95■■□□□ 1.9
TPM4-208ENST00000588410 TNS1Q9HBL0 1735 aaKnown RBP26.95■■□□□ 1.9
TPM4-208ENST00000588410 BCL9O00512 1426 aa26.94■■□□□ 1.9
TPM4-208ENST00000588410 SMG6Q86US8 1419 aaKnown RBP26.94■■□□□ 1.9
TPM4-208ENST00000588410 PANK3Q9H999 370 aa26.93■■□□□ 1.9
TPM4-208ENST00000588410 FLT4P35916 1363 aa26.92■■□□□ 1.9
TPM4-208ENST00000588410 R3HDM1Q15032 1099 aaKnown RBP26.91■■□□□ 1.9
TPM4-208ENST00000588410 HSP90AB2PQ58FF8 381 aa26.91■■□□□ 1.9
TPM4-208ENST00000588410 NBPF14Q5TI25 921 aa26.91■■□□□ 1.9
TPM4-208ENST00000588410 KIF24Q5T7B8 1368 aa26.91■■□□□ 1.9
TPM4-208ENST00000588410 PEAK1Q9H792 1746 aa26.9■■□□□ 1.9
TPM4-208ENST00000588410 WNK3Q9BYP7 1800 aa26.9■■□□□ 1.9
TPM4-208ENST00000588410 PPM1GO15355 546 aaPredicted RBP26.9■■□□□ 1.9
TPM4-208ENST00000588410 INSRP06213 1382 aa26.89■■□□□ 1.9
TPM4-208ENST00000588410 PLSCR1O15162 318 aa26.89■■□□□ 1.9
TPM4-208ENST00000588410 EMILIN1Q9Y6C2 1016 aa26.89■■□□□ 1.9
TPM4-208ENST00000588410 NBPF6Q5VWK0 638 aa26.88■■□□□ 1.89
TPM4-208ENST00000588410 PTF1AQ7RTS3 328 aa26.88■■□□□ 1.89
TPM4-208ENST00000588410 DDX54Q8TDD1 881 aaKnown RBP26.88■■□□□ 1.89
TPM4-208ENST00000588410 NBPF4Q96M43 638 aa26.88■■□□□ 1.89
TPM4-208ENST00000588410 ACSBG1Q96GR2 724 aa26.87■■□□□ 1.89
TPM4-208ENST00000588410 KIF20BQ96Q89 1820 aa26.87■■□□□ 1.89
TPM4-208ENST00000588410 USHBP1Q8N6Y0 703 aa26.86■■□□□ 1.89
TPM4-208ENST00000588410 TNNT2P45379 298 aaPredicted RBP26.85■■□□□ 1.89
TPM4-208ENST00000588410 RAPGEF4Q8WZA2 1011 aa26.85■■□□□ 1.89
TPM4-208ENST00000588410 KCNQ2O43526 872 aa26.84■■□□□ 1.89
TPM4-208ENST00000588410 ZCRB1Q8TBF4 217 aaKnown RBP26.84■■□□□ 1.89
TPM4-208ENST00000588410 FAM208AQ9UK61 1670 aaKnown RBP26.83■■□□□ 1.89
TPM4-208ENST00000588410 KNSTRNQ9Y448 316 aa26.82■■□□□ 1.88
TPM4-208ENST00000588410 TATP17735 454 aaPredicted RBP26.81■■□□□ 1.88
TPM4-208ENST00000588410 KIF7Q2M1P5 1343 aa26.81■■□□□ 1.88
TPM4-208ENST00000588410 POLKQ9UBT6 870 aa26.8■■□□□ 1.88
TPM4-208ENST00000588410 WASHC2AQ641Q2 1341 aa26.8■■□□□ 1.88
TPM4-208ENST00000588410 NSD2O96028 1365 aa26.8■■□□□ 1.88
TPM4-208ENST00000588410 MEGF6O75095 1541 aa26.78■■□□□ 1.88
TPM4-208ENST00000588410 TXNRD1Q16881 649 aa26.77■■□□□ 1.88
TPM4-208ENST00000588410 MORC1Q86VD1 984 aa26.77■■□□□ 1.88
TPM4-208ENST00000588410 PROM2Q8N271 834 aa26.75■■□□□ 1.87
TPM4-208ENST00000588410 SYTL4Q96C24 671 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms