RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FLT4P35916 1363 aa15.11■□□□□ 0.01
VMP1-207ENST00000588131 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
VMP1-207ENST00000588131 KIF24Q5T7B8 1368 aa15.1■□□□□ 0.01
VMP1-207ENST00000588131 HOXC9P31274 260 aa15.09■□□□□ 0.01
VMP1-207ENST00000588131 IL13P35225 146 aa15.09■□□□□ 0.01
VMP1-207ENST00000588131 AMPHP49418 695 aa15.09■□□□□ 0.01
VMP1-207ENST00000588131 HNRNPUQ00839 825 aaKnown RBP eCLIP15.09■□□□□ 0.01
VMP1-207ENST00000588131 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
VMP1-207ENST00000588131 COL22A1Q8NFW1 1626 aaPredicted RBP15.09■□□□□ 0.01
VMP1-207ENST00000588131 RTL1A6NKG5 1358 aa15.09■□□□□ 0.01
VMP1-207ENST00000588131 SENP3-EIF4A1A0A087X0R7 540 aa15.08■□□□□ 0
VMP1-207ENST00000588131 ZBTB7CA1YPR0 619 aa15.08■□□□□ 0
VMP1-207ENST00000588131 U2SURPO15042 1029 aaKnown RBP15.08■□□□□ 0
VMP1-207ENST00000588131 EIF4A2Q14240 407 aaKnown RBP15.08■□□□□ 0
VMP1-207ENST00000588131 ARHGEF25Q86VW2 580 aa15.08■□□□□ 0
VMP1-207ENST00000588131 RGPD1P0DJD0 1748 aa15.08■□□□□ 0
VMP1-207ENST00000588131 ZC3H6P61129 1189 aaKnown RBP15.07■□□□□ 0
VMP1-207ENST00000588131 LRRC59Q96AG4 307 aaKnown RBP15.07■□□□□ 0
VMP1-207ENST00000588131 NUDCQ9Y266 331 aa15.07■□□□□ 0
VMP1-207ENST00000588131 COL18A1P39060 1754 aa15.06■□□□□ 0
VMP1-207ENST00000588131 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
VMP1-207ENST00000588131 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
VMP1-207ENST00000588131 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
VMP1-207ENST00000588131 IP6K1Q92551 441 aa15.06■□□□□ 0
VMP1-207ENST00000588131 RGPD5Q99666 1765 aa15.05■□□□□ -0
VMP1-207ENST00000588131 CPDO75976 1380 aa15.04■□□□□ -0
VMP1-207ENST00000588131 KIAA0232Q92628 1395 aa15.03■□□□□ -0
VMP1-207ENST00000588131 ABCC6O95255 1503 aa15.02■□□□□ -0
VMP1-207ENST00000588131 HMOX1P09601 288 aa15.02■□□□□ -0
VMP1-207ENST00000588131 LTV1Q96GA3 475 aaPredicted RBP15.02■□□□□ -0
VMP1-207ENST00000588131 AXIN2Q9Y2T1 843 aa15.02■□□□□ -0
VMP1-207ENST00000588131 RGPD2P0DJD1 1756 aa15.01□□□□□ -0.01
VMP1-207ENST00000588131 LMO7Q8WWI1 1683 aa15.01□□□□□ -0.01
VMP1-207ENST00000588131 HAP1P54257 671 aaPredicted RBP15.01□□□□□ -0.01
VMP1-207ENST00000588131 CHRNA2Q15822 529 aa15.01□□□□□ -0.01
VMP1-207ENST00000588131 RSPH6AQ9H0K4 717 aa15.01□□□□□ -0.01
VMP1-207ENST00000588131 ZBED9Q6R2W3 1325 aa15□□□□□ -0.01
VMP1-207ENST00000588131 AEBP1Q8IUX7 1158 aa15□□□□□ -0.01
VMP1-207ENST00000588131 RUNDC1Q96C34 613 aa15□□□□□ -0.01
VMP1-207ENST00000588131 PLEKHF1Q96S99 279 aa15□□□□□ -0.01
VMP1-207ENST00000588131 IGSF1Q8N6C5 1336 aa14.99□□□□□ -0.01
VMP1-207ENST00000588131 APAF1O14727 1248 aa14.99□□□□□ -0.01
VMP1-207ENST00000588131 EYA1Q99502 592 aa14.99□□□□□ -0.01
VMP1-207ENST00000588131 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
VMP1-207ENST00000588131 CAMTA1Q9Y6Y1 1673 aa14.99□□□□□ -0.01
VMP1-207ENST00000588131 FCHSD2O94868 740 aa14.98□□□□□ -0.01
VMP1-207ENST00000588131 PRKAR2BP31323 418 aa14.98□□□□□ -0.01
VMP1-207ENST00000588131 SULT6B1Q6IMI4 303 aa14.98□□□□□ -0.01
VMP1-207ENST00000588131 ANKRD24Q8TF21 1146 aa14.98□□□□□ -0.01
VMP1-207ENST00000588131 PRDM11Q9NQV5 511 aa14.98□□□□□ -0.01
VMP1-207ENST00000588131 KDRP35968 1356 aa14.97□□□□□ -0.01
VMP1-207ENST00000588131 ERBB3P21860 1342 aa14.96□□□□□ -0.01
VMP1-207ENST00000588131 NBPF6Q5VWK0 638 aa14.96□□□□□ -0.01
VMP1-207ENST00000588131 TCP11L2Q8N4U5 519 aa14.96□□□□□ -0.01
VMP1-207ENST00000588131 USHBP1Q8N6Y0 703 aa14.96□□□□□ -0.01
VMP1-207ENST00000588131 NBPF4Q96M43 638 aa14.96□□□□□ -0.01
VMP1-207ENST00000588131 FAM208AQ9UK61 1670 aaKnown RBP14.96□□□□□ -0.01
VMP1-207ENST00000588131 COL14A1Q05707 1796 aaKnown RBP14.96□□□□□ -0.02
VMP1-207ENST00000588131 NCAPD2Q15021 1401 aa14.95□□□□□ -0.02
VMP1-207ENST00000588131 FAM83GA6ND36 823 aa14.95□□□□□ -0.02
VMP1-207ENST00000588131 HSPA1LP34931 641 aa14.95□□□□□ -0.02
VMP1-207ENST00000588131 PHACTR3Q96KR7 559 aa14.95□□□□□ -0.02
VMP1-207ENST00000588131 PNNQ9H307 717 aaKnown RBP14.95□□□□□ -0.02
VMP1-207ENST00000588131 RRP7AQ9Y3A4 280 aaKnown RBP14.95□□□□□ -0.02
VMP1-207ENST00000588131 JCADQ9P266 1359 aa14.95□□□□□ -0.02
VMP1-207ENST00000588131 MAPK8IP3Q9UPT6 1336 aa14.94□□□□□ -0.02
VMP1-207ENST00000588131 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
VMP1-207ENST00000588131 CENPBP07199 599 aaPredicted RBP14.94□□□□□ -0.02
VMP1-207ENST00000588131 COL5A2P05997 1499 aaPredicted RBP14.94□□□□□ -0.02
VMP1-207ENST00000588131 NUTM2BA6NNL0 878 aaPredicted RBP14.93□□□□□ -0.02
VMP1-207ENST00000588131 NUTM2EB1AL46 878 aaPredicted RBP14.93□□□□□ -0.02
VMP1-207ENST00000588131 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
VMP1-207ENST00000588131 NUTM2AQ8IVF1 878 aaPredicted RBP14.93□□□□□ -0.02
VMP1-207ENST00000588131 PLCH1Q4KWH8 1693 aa14.93□□□□□ -0.02
VMP1-207ENST00000588131 TMPOP42166 694 aaKnown RBP14.92□□□□□ -0.02
VMP1-207ENST00000588131 NEUROD2Q15784 382 aa14.92□□□□□ -0.02
VMP1-207ENST00000588131 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
VMP1-207ENST00000588131 ADAMTS2O95450 1211 aa14.91□□□□□ -0.02
VMP1-207ENST00000588131 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
VMP1-207ENST00000588131 DLG5Q8TDM6 1919 aa14.9□□□□□ -0.02
VMP1-207ENST00000588131 NRAPQ86VF7 1730 aa14.9□□□□□ -0.02
VMP1-207ENST00000588131 NEFMP07197 916 aa14.9□□□□□ -0.02
VMP1-207ENST00000588131 CSB-PGBD3P0DP91 1061 aa14.9□□□□□ -0.02
VMP1-207ENST00000588131 LRP6O75581 1613 aa14.9□□□□□ -0.02
VMP1-207ENST00000588131 WDR17Q8IZU2 1322 aa14.9□□□□□ -0.02
VMP1-207ENST00000588131 NFE2L2Q16236 605 aa14.89□□□□□ -0.03
VMP1-207ENST00000588131 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
VMP1-207ENST00000588131 NLRP2Q9NX02 1062 aa14.89□□□□□ -0.03
VMP1-207ENST00000588131 BTG4Q9NY30 223 aa14.89□□□□□ -0.03
VMP1-207ENST00000588131 RIPK4P57078 832 aa14.88□□□□□ -0.03
VMP1-207ENST00000588131 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
VMP1-207ENST00000588131 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
VMP1-207ENST00000588131 NGEFQ8N5V2 710 aa14.88□□□□□ -0.03
VMP1-207ENST00000588131 CDCA7LQ96GN5 454 aa14.88□□□□□ -0.03
VMP1-207ENST00000588131 STRN4Q9NRL3 753 aa14.88□□□□□ -0.03
VMP1-207ENST00000588131 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
VMP1-207ENST00000588131 MTHFSDQ2M296 383 aaKnown RBP14.87□□□□□ -0.03
VMP1-207ENST00000588131 LARP1Q6PKG0 1096 aaKnown RBP14.87□□□□□ -0.03
VMP1-207ENST00000588131 SPATA31A6Q5VVP1 1343 aa14.87□□□□□ -0.03
VMP1-207ENST00000588131 MEGF6O75095 1541 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms