RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 R3HDM1Q15032 1099 aaKnown RBP20.28■□□□□ 0.84
VMP1-206ENST00000587945 HDGFL2Q7Z4V5 671 aaPredicted RBP20.28■□□□□ 0.84
VMP1-206ENST00000587945 RGPD1P0DJD0 1748 aa20.27■□□□□ 0.84
VMP1-206ENST00000587945 TESK2Q96S53 571 aa20.27■□□□□ 0.84
VMP1-206ENST00000587945 USP31Q70CQ4 1352 aa20.26■□□□□ 0.83
VMP1-206ENST00000587945 DDB1Q16531 1140 aa20.26■□□□□ 0.83
VMP1-206ENST00000587945 AKAP12Q02952 1782 aa20.26■□□□□ 0.83
VMP1-206ENST00000587945 NFAT5O94916 1531 aa20.25■□□□□ 0.83
VMP1-206ENST00000587945 TNS1Q9HBL0 1735 aaKnown RBP20.24■□□□□ 0.83
VMP1-206ENST00000587945 A0A1W2PP64 1363 aa20.24■□□□□ 0.83
VMP1-206ENST00000587945 COL18A1P39060 1754 aa20.24■□□□□ 0.83
VMP1-206ENST00000587945 CARD10Q9BWT7 1032 aa20.24■□□□□ 0.83
VMP1-206ENST00000587945 TERF2IPQ9NYB0 399 aa20.24■□□□□ 0.83
VMP1-206ENST00000587945 PUS7Q96PZ0 661 aaKnown RBP20.23■□□□□ 0.83
VMP1-206ENST00000587945 EDC4Q6P2E9 1401 aaKnown RBP20.21■□□□□ 0.83
VMP1-206ENST00000587945 MARCH10Q8NA82 808 aaPredicted RBP20.21■□□□□ 0.83
VMP1-206ENST00000587945 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
VMP1-206ENST00000587945 OVOS2A0A0G2JMS6 1433 aa20.2■□□□□ 0.82
VMP1-206ENST00000587945 OVOS2A0A0J9YW53 1432 aa20.2■□□□□ 0.82
VMP1-206ENST00000587945 OVOS2Q6IE36 1432 aa20.2■□□□□ 0.82
VMP1-206ENST00000587945 PTF1AQ7RTS3 328 aa20.2■□□□□ 0.82
VMP1-206ENST00000587945 CDCA7Q9BWT1 371 aaPredicted RBP20.2■□□□□ 0.82
VMP1-206ENST00000587945 MON2Q7Z3U7 1717 aa20.19■□□□□ 0.82
VMP1-206ENST00000587945 PARP4Q9UKK3 1724 aaKnown RBP20.19■□□□□ 0.82
VMP1-206ENST00000587945 C11orf95C9JLR9 678 aaPredicted RBP20.19■□□□□ 0.82
VMP1-206ENST00000587945 NLRP2Q9NX02 1062 aa20.18■□□□□ 0.82
VMP1-206ENST00000587945 ERBB3P21860 1342 aa20.17■□□□□ 0.82
VMP1-206ENST00000587945 LRRC37A3O60309 1634 aa20.16■□□□□ 0.82
VMP1-206ENST00000587945 EXOC5O00471 708 aa20.16■□□□□ 0.82
VMP1-206ENST00000587945 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
VMP1-206ENST00000587945 CCDC7Q96M83 1385 aa20.16■□□□□ 0.82
VMP1-206ENST00000587945 BCL11BQ9C0K0 894 aaPredicted RBP20.15■□□□□ 0.82
VMP1-206ENST00000587945 USP47Q96K76 1375 aa20.15■□□□□ 0.82
VMP1-206ENST00000587945 NINLQ9Y2I6 1382 aa20.14■□□□□ 0.81
VMP1-206ENST00000587945 FBLN1P23142 703 aa20.14■□□□□ 0.81
VMP1-206ENST00000587945 NBPF14Q5TI25 921 aa20.14■□□□□ 0.81
VMP1-206ENST00000587945 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
VMP1-206ENST00000587945 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
VMP1-206ENST00000587945 ABCC6O95255 1503 aa20.12■□□□□ 0.81
VMP1-206ENST00000587945 TMF1P82094 1093 aa20.12■□□□□ 0.81
VMP1-206ENST00000587945 COG3Q96JB2 828 aa20.12■□□□□ 0.81
VMP1-206ENST00000587945 PCGF6Q9BYE7 350 aa20.12■□□□□ 0.81
VMP1-206ENST00000587945 RGPD5Q99666 1765 aa20.12■□□□□ 0.81
VMP1-206ENST00000587945 LRP5O75197 1615 aa20.12■□□□□ 0.81
VMP1-206ENST00000587945 PLSCR1O15162 318 aa20.11■□□□□ 0.81
VMP1-206ENST00000587945 IP6K1Q92551 441 aa20.11■□□□□ 0.81
VMP1-206ENST00000587945 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
VMP1-206ENST00000587945 IL2RBP14784 551 aa20.1■□□□□ 0.81
VMP1-206ENST00000587945 BCL9O00512 1426 aa20.1■□□□□ 0.81
VMP1-206ENST00000587945 USP54Q70EL1 1684 aa20.1■□□□□ 0.81
VMP1-206ENST00000587945 ANKRD36BQ8N2N9 1353 aa20.09■□□□□ 0.81
VMP1-206ENST00000587945 KCNQ2O43526 872 aa20.09■□□□□ 0.81
VMP1-206ENST00000587945 PROM2Q8N271 834 aa20.09■□□□□ 0.81
VMP1-206ENST00000587945 TNS2Q63HR2 1409 aa20.09■□□□□ 0.81
VMP1-206ENST00000587945 MAP3K19Q56UN5 1328 aa20.08■□□□□ 0.81
VMP1-206ENST00000587945 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.81
VMP1-206ENST00000587945 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
VMP1-206ENST00000587945 RREB1Q92766 1687 aa20.07■□□□□ 0.8
VMP1-206ENST00000587945 GGNBP2Q9H3C7 697 aa20.07■□□□□ 0.8
VMP1-206ENST00000587945 FYB1O15117 783 aa20.06■□□□□ 0.8
VMP1-206ENST00000587945 AMPHP49418 695 aa20.06■□□□□ 0.8
VMP1-206ENST00000587945 NUP188Q5SRE5 1749 aa20.06■□□□□ 0.8
VMP1-206ENST00000587945 WNK3Q9BYP7 1800 aa20.05■□□□□ 0.8
VMP1-206ENST00000587945 HOXC9P31274 260 aa20.05■□□□□ 0.8
VMP1-206ENST00000587945 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
VMP1-206ENST00000587945 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
VMP1-206ENST00000587945 CDCA8Q53HL2 280 aa20.02■□□□□ 0.8
VMP1-206ENST00000587945 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.8
VMP1-206ENST00000587945 LTN1O94822 1766 aa20.02■□□□□ 0.8
VMP1-206ENST00000587945 DDX54Q8TDD1 881 aaKnown RBP20.01■□□□□ 0.79
VMP1-206ENST00000587945 PDGFDQ9GZP0 370 aaPredicted RBP20.01■□□□□ 0.79
VMP1-206ENST00000587945 SBF2Q86WG5 1849 aa20■□□□□ 0.79
VMP1-206ENST00000587945 CARD14Q9BXL6 1004 aa20■□□□□ 0.79
VMP1-206ENST00000587945 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
VMP1-206ENST00000587945 SPON1Q9HCB6 807 aa19.99■□□□□ 0.79
VMP1-206ENST00000587945 NBPF6Q5VWK0 638 aa19.96■□□□□ 0.79
VMP1-206ENST00000587945 USHBP1Q8N6Y0 703 aa19.96■□□□□ 0.79
VMP1-206ENST00000587945 NBPF4Q96M43 638 aa19.96■□□□□ 0.79
VMP1-206ENST00000587945 STK32BQ9NY57 414 aa19.96■□□□□ 0.79
VMP1-206ENST00000587945 PPP1R1BQ9UD71 204 aaPredicted RBP19.96■□□□□ 0.79
VMP1-206ENST00000587945 ZBTB7AO95365 584 aa19.95■□□□□ 0.78
VMP1-206ENST00000587945 RTL1A6NKG5 1358 aa19.95■□□□□ 0.78
VMP1-206ENST00000587945 RGPD3A6NKT7 1758 aaPredicted RBP19.94■□□□□ 0.78
VMP1-206ENST00000587945 RGPD4Q7Z3J3 1758 aa19.94■□□□□ 0.78
VMP1-206ENST00000587945 SLC15A2Q16348 729 aa19.94■□□□□ 0.78
VMP1-206ENST00000587945 HSP90AB2PQ58FF8 381 aa19.94■□□□□ 0.78
VMP1-206ENST00000587945 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
VMP1-206ENST00000587945 NSD3Q9BZ95 1437 aa19.93■□□□□ 0.78
VMP1-206ENST00000587945 ZCRB1Q8TBF4 217 aaKnown RBP19.93■□□□□ 0.78
VMP1-206ENST00000587945 MEGF6O75095 1541 aa19.92■□□□□ 0.78
VMP1-206ENST00000587945 NHSQ6T4R5 1651 aa19.91■□□□□ 0.78
VMP1-206ENST00000587945 PRIM1P49642 420 aaKnown RBP19.91■□□□□ 0.78
VMP1-206ENST00000587945 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
VMP1-206ENST00000587945 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
VMP1-206ENST00000587945 LRRC4BQ9NT99 713 aa19.91■□□□□ 0.78
VMP1-206ENST00000587945 ATF5Q9Y2D1 282 aaPredicted RBP19.91■□□□□ 0.78
VMP1-206ENST00000587945 EMILIN1Q9Y6C2 1016 aa19.91■□□□□ 0.78
VMP1-206ENST00000587945 INSRP06213 1382 aa19.89■□□□□ 0.77
VMP1-206ENST00000587945 SMG6Q86US8 1419 aaKnown RBP19.88■□□□□ 0.77
VMP1-206ENST00000587945 FLT4P35916 1363 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms