RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 TOM1L2Q6ZVM7 507 aa28.06■■■□□ 2.08
TRAPPC6A-203ENST00000587818 RGPD5Q99666 1765 aa28.06■■■□□ 2.08
TRAPPC6A-203ENST00000587818 EDC4Q6P2E9 1401 aaKnown RBP28.05■■■□□ 2.08
TRAPPC6A-203ENST00000587818 CRB1P82279 1406 aa28.02■■■□□ 2.08
TRAPPC6A-203ENST00000587818 CSB-PGBD3P0DP91 1061 aa28.02■■■□□ 2.08
TRAPPC6A-203ENST00000587818 PDE3BQ13370 1112 aa28.02■■■□□ 2.08
TRAPPC6A-203ENST00000587818 THRAP3Q9Y2W1 955 aaKnown RBP28.02■■■□□ 2.08
TRAPPC6A-203ENST00000587818 NFAT5O94916 1531 aa28.02■■■□□ 2.08
TRAPPC6A-203ENST00000587818 NINLQ9Y2I6 1382 aa27.99■■■□□ 2.07
TRAPPC6A-203ENST00000587818 WDR17Q8IZU2 1322 aa27.99■■■□□ 2.07
TRAPPC6A-203ENST00000587818 FBLN1P23142 703 aa27.98■■■□□ 2.07
TRAPPC6A-203ENST00000587818 TRIM37O94972 964 aa27.96■■■□□ 2.07
TRAPPC6A-203ENST00000587818 CDCA8Q53HL2 280 aa27.96■■■□□ 2.07
TRAPPC6A-203ENST00000587818 FAM196AQ6ZSG2 479 aa27.96■■■□□ 2.07
TRAPPC6A-203ENST00000587818 ANKRD36BQ8N2N9 1353 aa27.96■■■□□ 2.07
TRAPPC6A-203ENST00000587818 POLR3GLQ9BT43 218 aa27.95■■■□□ 2.06
TRAPPC6A-203ENST00000587818 COG3Q96JB2 828 aa27.94■■■□□ 2.06
TRAPPC6A-203ENST00000587818 BAG6P46379 1132 aa27.93■■■□□ 2.06
TRAPPC6A-203ENST00000587818 EN1Q05925 392 aaPredicted RBP27.93■■■□□ 2.06
TRAPPC6A-203ENST00000587818 CARD10Q9BWT7 1032 aa27.93■■■□□ 2.06
TRAPPC6A-203ENST00000587818 USP54Q70EL1 1684 aa27.93■■■□□ 2.06
TRAPPC6A-203ENST00000587818 OVOS2A0A0J9YW53 1432 aa27.92■■■□□ 2.06
TRAPPC6A-203ENST00000587818 OVOS2Q6IE36 1432 aa27.92■■■□□ 2.06
TRAPPC6A-203ENST00000587818 HSPA5P11021 654 aaKnown RBP27.92■■■□□ 2.06
TRAPPC6A-203ENST00000587818 GGNBP2Q9H3C7 697 aa27.92■■■□□ 2.06
TRAPPC6A-203ENST00000587818 FYB1O15117 783 aa27.91■■■□□ 2.06
TRAPPC6A-203ENST00000587818 LTN1O94822 1766 aa27.91■■■□□ 2.06
TRAPPC6A-203ENST00000587818 DDB1Q16531 1140 aa27.9■■■□□ 2.06
TRAPPC6A-203ENST00000587818 NLRP2Q9NX02 1062 aa27.9■■■□□ 2.06
TRAPPC6A-203ENST00000587818 EIF4G2P78344 907 aaKnown RBP eCLIP27.89■■■□□ 2.06
TRAPPC6A-203ENST00000587818 ANKRD24Q8TF21 1146 aa27.89■■■□□ 2.06
TRAPPC6A-203ENST00000587818 CARD14Q9BXL6 1004 aa27.89■■■□□ 2.06
TRAPPC6A-203ENST00000587818 LTV1Q96GA3 475 aaPredicted RBP27.88■■■□□ 2.05
TRAPPC6A-203ENST00000587818 APBA3O96018 575 aa27.86■■■□□ 2.05
TRAPPC6A-203ENST00000587818 IP6K1Q92551 441 aa27.86■■■□□ 2.05
TRAPPC6A-203ENST00000587818 RGPD1P0DJD0 1748 aa27.86■■■□□ 2.05
TRAPPC6A-203ENST00000587818 PARP4Q9UKK3 1724 aaKnown RBP27.86■■■□□ 2.05
TRAPPC6A-203ENST00000587818 EZH2Q15910 746 aaKnown RBP27.85■■■□□ 2.05
TRAPPC6A-203ENST00000587818 ERBB3P21860 1342 aa27.85■■■□□ 2.05
TRAPPC6A-203ENST00000587818 MAP3K19Q56UN5 1328 aa27.84■■■□□ 2.05
TRAPPC6A-203ENST00000587818 AMPHP49418 695 aa27.83■■■□□ 2.05
TRAPPC6A-203ENST00000587818 MARCH10Q8NA82 808 aaPredicted RBP27.83■■■□□ 2.05
TRAPPC6A-203ENST00000587818 CDCA7Q9BWT1 371 aaPredicted RBP27.83■■■□□ 2.05
TRAPPC6A-203ENST00000587818 EXOC5O00471 708 aa27.82■■■□□ 2.04
TRAPPC6A-203ENST00000587818 RRS1Q15050 365 aaKnown RBP27.82■■■□□ 2.04
TRAPPC6A-203ENST00000587818 CCDC7Q96M83 1385 aa27.81■■■□□ 2.04
TRAPPC6A-203ENST00000587818 ABCC6O95255 1503 aa27.81■■■□□ 2.04
TRAPPC6A-203ENST00000587818 TNS1Q9HBL0 1735 aaKnown RBP27.81■■■□□ 2.04
TRAPPC6A-203ENST00000587818 CAMKK2Q96RR4 588 aa27.8■■■□□ 2.04
TRAPPC6A-203ENST00000587818 LRRC37A3O60309 1634 aa27.8■■■□□ 2.04
TRAPPC6A-203ENST00000587818 MYOM1P52179 1685 aa27.8■■■□□ 2.04
TRAPPC6A-203ENST00000587818 DISP2A7MBM2 1401 aa27.79■■■□□ 2.04
TRAPPC6A-203ENST00000587818 HOXC9P31274 260 aa27.79■■■□□ 2.04
TRAPPC6A-203ENST00000587818 WNK3Q9BYP7 1800 aa27.78■■■□□ 2.04
TRAPPC6A-203ENST00000587818 PSDA5PKW4 1024 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC6A-203ENST00000587818 PTF1AQ7RTS3 328 aa27.78■■■□□ 2.04
TRAPPC6A-203ENST00000587818 NSD3Q9BZ95 1437 aa27.77■■■□□ 2.04
TRAPPC6A-203ENST00000587818 C11orf95C9JLR9 678 aaPredicted RBP27.77■■■□□ 2.04
TRAPPC6A-203ENST00000587818 IL2RBP14784 551 aa27.75■■■□□ 2.03
TRAPPC6A-203ENST00000587818 OVOS2A0A0G2JMS6 1433 aa27.75■■■□□ 2.03
TRAPPC6A-203ENST00000587818 PEAK1Q9H792 1746 aa27.73■■■□□ 2.03
TRAPPC6A-203ENST00000587818 KIF20BQ96Q89 1820 aa27.73■■■□□ 2.03
TRAPPC6A-203ENST00000587818 SBF2Q86WG5 1849 aa27.7■■■□□ 2.02
TRAPPC6A-203ENST00000587818 HSP90AB2PQ58FF8 381 aa27.7■■■□□ 2.02
TRAPPC6A-203ENST00000587818 PANK3Q9H999 370 aa27.7■■■□□ 2.02
TRAPPC6A-203ENST00000587818 RGPD2P0DJD1 1756 aa27.68■■■□□ 2.02
TRAPPC6A-203ENST00000587818 R3HDM1Q15032 1099 aaKnown RBP27.68■■■□□ 2.02
TRAPPC6A-203ENST00000587818 BCL11BQ9C0K0 894 aaPredicted RBP27.68■■■□□ 2.02
TRAPPC6A-203ENST00000587818 NBPF6Q5VWK0 638 aa27.67■■■□□ 2.02
TRAPPC6A-203ENST00000587818 ACSBG1Q96GR2 724 aa27.67■■■□□ 2.02
TRAPPC6A-203ENST00000587818 NBPF4Q96M43 638 aa27.67■■■□□ 2.02
TRAPPC6A-203ENST00000587818 EMILIN1Q9Y6C2 1016 aa27.67■■■□□ 2.02
TRAPPC6A-203ENST00000587818 KCNQ2O43526 872 aa27.66■■■□□ 2.02
TRAPPC6A-203ENST00000587818 USHBP1Q8N6Y0 703 aa27.66■■■□□ 2.02
TRAPPC6A-203ENST00000587818 CGNL1Q0VF96 1302 aa27.66■■■□□ 2.02
TRAPPC6A-203ENST00000587818 PPM1GO15355 546 aaPredicted RBP27.65■■■□□ 2.02
TRAPPC6A-203ENST00000587818 DDX54Q8TDD1 881 aaKnown RBP27.65■■■□□ 2.02
TRAPPC6A-203ENST00000587818 TNS2Q63HR2 1409 aa27.65■■■□□ 2.02
TRAPPC6A-203ENST00000587818 KAT6BQ8WYB5 2073 aa27.64■■■□□ 2.02
TRAPPC6A-203ENST00000587818 TNNT2P45379 298 aaPredicted RBP27.63■■■□□ 2.01
TRAPPC6A-203ENST00000587818 RTL1A6NKG5 1358 aa27.62■■■□□ 2.01
TRAPPC6A-203ENST00000587818 PARD3Q8TEW0 1356 aa27.6■■■□□ 2.01
TRAPPC6A-203ENST00000587818 PLSCR1O15162 318 aa27.6■■■□□ 2.01
TRAPPC6A-203ENST00000587818 BCL9O00512 1426 aa27.59■■■□□ 2.01
TRAPPC6A-203ENST00000587818 INSRP06213 1382 aa27.59■■■□□ 2.01
TRAPPC6A-203ENST00000587818 FAM208AQ9UK61 1670 aaKnown RBP27.59■■■□□ 2.01
TRAPPC6A-203ENST00000587818 PROM2Q8N271 834 aa27.58■■■□□ 2.01
TRAPPC6A-203ENST00000587818 FLT4P35916 1363 aa27.58■■■□□ 2.01
TRAPPC6A-203ENST00000587818 MAP2P11137 1827 aaKnown RBP27.57■■■□□ 2
TRAPPC6A-203ENST00000587818 NBPF14Q5TI25 921 aa27.57■■■□□ 2
TRAPPC6A-203ENST00000587818 ZCRB1Q8TBF4 217 aaKnown RBP27.56■■■□□ 2
TRAPPC6A-203ENST00000587818 POLKQ9UBT6 870 aa27.56■■■□□ 2
TRAPPC6A-203ENST00000587818 RREB1Q92766 1687 aa27.56■■■□□ 2
TRAPPC6A-203ENST00000587818 KIF7Q2M1P5 1343 aa27.55■■■□□ 2
TRAPPC6A-203ENST00000587818 NUP188Q5SRE5 1749 aa27.55■■■□□ 2
TRAPPC6A-203ENST00000587818 SMG6Q86US8 1419 aaKnown RBP27.54■■■□□ 2
TRAPPC6A-203ENST00000587818 MEGF6O75095 1541 aa27.53■■■□□ 2
TRAPPC6A-203ENST00000587818 KIF24Q5T7B8 1368 aa27.52■■■□□ 2
TRAPPC6A-203ENST00000587818 RAPGEF4Q8WZA2 1011 aa27.52■■■□□ 2
TRAPPC6A-203ENST00000587818 WASHC2AQ641Q2 1341 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms