RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 USP35Q9P2H5 1018 aa32.69■■■□□ 2.82
CHAF1A-205ENST00000587580 LTN1O94822 1766 aa32.68■■■□□ 2.82
CHAF1A-205ENST00000587580 RGPD5Q99666 1765 aa32.68■■■□□ 2.82
CHAF1A-205ENST00000587580 POLR3GLQ9BT43 218 aa32.67■■■□□ 2.82
CHAF1A-205ENST00000587580 ABCC6O95255 1503 aa32.67■■■□□ 2.82
CHAF1A-205ENST00000587580 KRT27Q7Z3Y8 459 aa32.65■■■□□ 2.82
CHAF1A-205ENST00000587580 AXIN2Q9Y2T1 843 aa32.65■■■□□ 2.82
CHAF1A-205ENST00000587580 CRB1P82279 1406 aa32.65■■■□□ 2.82
CHAF1A-205ENST00000587580 KIF20BQ96Q89 1820 aa32.63■■■□□ 2.81
CHAF1A-205ENST00000587580 COG3Q96JB2 828 aa32.63■■■□□ 2.81
CHAF1A-205ENST00000587580 TCP11L2Q8N4U5 519 aa32.62■■■□□ 2.81
CHAF1A-205ENST00000587580 BARGINQ6ZT62 677 aa32.61■■■□□ 2.81
CHAF1A-205ENST00000587580 NSD3Q9BZ95 1437 aa32.6■■■□□ 2.81
CHAF1A-205ENST00000587580 WDR17Q8IZU2 1322 aa32.59■■■□□ 2.81
CHAF1A-205ENST00000587580 TOM1L2Q6ZVM7 507 aa32.58■■■□□ 2.81
CHAF1A-205ENST00000587580 THRAP3Q9Y2W1 955 aaKnown RBP32.58■■■□□ 2.81
CHAF1A-205ENST00000587580 FYB1O15117 783 aa32.57■■■□□ 2.8
CHAF1A-205ENST00000587580 GGNBP2Q9H3C7 697 aa32.57■■■□□ 2.8
CHAF1A-205ENST00000587580 CSB-PGBD3P0DP91 1061 aa32.56■■■□□ 2.8
CHAF1A-205ENST00000587580 CARD14Q9BXL6 1004 aa32.56■■■□□ 2.8
CHAF1A-205ENST00000587580 EP400Q96L91 3159 aa32.56■■■□□ 2.8
CHAF1A-205ENST00000587580 WNK3Q9BYP7 1800 aa32.53■■■□□ 2.8
CHAF1A-205ENST00000587580 PARP4Q9UKK3 1724 aaKnown RBP32.52■■■□□ 2.8
CHAF1A-205ENST00000587580 BLMP54132 1417 aaPredicted RBP32.51■■■□□ 2.79
CHAF1A-205ENST00000587580 CCDC125Q86Z20 511 aa32.5■■■□□ 2.79
CHAF1A-205ENST00000587580 ERBB3P21860 1342 aa32.5■■■□□ 2.79
CHAF1A-205ENST00000587580 C11orf95C9JLR9 678 aaPredicted RBP32.49■■■□□ 2.79
CHAF1A-205ENST00000587580 FAM182BQ5T319 152 aa32.49■■■□□ 2.79
CHAF1A-205ENST00000587580 FBLN1P23142 703 aa32.48■■■□□ 2.79
CHAF1A-205ENST00000587580 MAP3K19Q56UN5 1328 aa32.48■■■□□ 2.79
CHAF1A-205ENST00000587580 CARD10Q9BWT7 1032 aa32.47■■■□□ 2.79
CHAF1A-205ENST00000587580 LRRC37A3O60309 1634 aa32.46■■■□□ 2.79
CHAF1A-205ENST00000587580 PDE3BQ13370 1112 aa32.45■■■□□ 2.79
CHAF1A-205ENST00000587580 ANKRD24Q8TF21 1146 aa32.45■■■□□ 2.79
CHAF1A-205ENST00000587580 IP6K1Q92551 441 aa32.45■■■□□ 2.79
CHAF1A-205ENST00000587580 CCDC7Q96M83 1385 aa32.45■■■□□ 2.78
CHAF1A-205ENST00000587580 CGNL1Q0VF96 1302 aa32.44■■■□□ 2.78
CHAF1A-205ENST00000587580 AMPHP49418 695 aa32.43■■■□□ 2.78
CHAF1A-205ENST00000587580 SF3B2Q13435 895 aaKnown RBP32.42■■■□□ 2.78
CHAF1A-205ENST00000587580 RRS1Q15050 365 aaKnown RBP32.42■■■□□ 2.78
CHAF1A-205ENST00000587580 HOXC9P31274 260 aa32.41■■■□□ 2.78
CHAF1A-205ENST00000587580 PANK3Q9H999 370 aa32.41■■■□□ 2.78
CHAF1A-205ENST00000587580 NLRP2Q9NX02 1062 aa32.41■■■□□ 2.78
CHAF1A-205ENST00000587580 RTL1A6NKG5 1358 aa32.41■■■□□ 2.78
CHAF1A-205ENST00000587580 FAM208AQ9UK61 1670 aaKnown RBP32.4■■■□□ 2.78
CHAF1A-205ENST00000587580 RGPD1P0DJD0 1748 aa32.4■■■□□ 2.78
CHAF1A-205ENST00000587580 KIF7Q2M1P5 1343 aa32.4■■■□□ 2.78
CHAF1A-205ENST00000587580 DISP2A7MBM2 1401 aa32.4■■■□□ 2.78
CHAF1A-205ENST00000587580 CDCA7Q9BWT1 371 aaPredicted RBP32.39■■■□□ 2.78
CHAF1A-205ENST00000587580 ANKRD26Q9UPS8 1709 aa32.38■■■□□ 2.77
CHAF1A-205ENST00000587580 LTV1Q96GA3 475 aaPredicted RBP32.38■■■□□ 2.77
CHAF1A-205ENST00000587580 DDB1Q16531 1140 aa32.37■■■□□ 2.77
CHAF1A-205ENST00000587580 FAM196AQ6ZSG2 479 aa32.37■■■□□ 2.77
CHAF1A-205ENST00000587580 PEAK1Q9H792 1746 aa32.35■■■□□ 2.77
CHAF1A-205ENST00000587580 TNS1Q9HBL0 1735 aaKnown RBP32.34■■■□□ 2.77
CHAF1A-205ENST00000587580 DEFB132Q7Z7B7 95 aa32.33■■■□□ 2.77
CHAF1A-205ENST00000587580 OVOS2A0A0G2JMS6 1433 aa32.31■■■□□ 2.76
CHAF1A-205ENST00000587580 FLT4P35916 1363 aa32.31■■■□□ 2.76
CHAF1A-205ENST00000587580 RGPD2P0DJD1 1756 aa32.3■■■□□ 2.76
CHAF1A-205ENST00000587580 KIF24Q5T7B8 1368 aa32.3■■■□□ 2.76
CHAF1A-205ENST00000587580 TNS2Q63HR2 1409 aa32.29■■■□□ 2.76
CHAF1A-205ENST00000587580 TRIM37O94972 964 aa32.29■■■□□ 2.76
CHAF1A-205ENST00000587580 BAG6P46379 1132 aa32.29■■■□□ 2.76
CHAF1A-205ENST00000587580 SMG6Q86US8 1419 aaKnown RBP32.28■■■□□ 2.76
CHAF1A-205ENST00000587580 IL2RBP14784 551 aa32.28■■■□□ 2.76
CHAF1A-205ENST00000587580 EMILIN1Q9Y6C2 1016 aa32.28■■■□□ 2.76
CHAF1A-205ENST00000587580 NSD2O96028 1365 aa32.27■■■□□ 2.76
CHAF1A-205ENST00000587580 MAP2P11137 1827 aaKnown RBP32.26■■■□□ 2.76
CHAF1A-205ENST00000587580 EXOC5O00471 708 aa32.26■■■□□ 2.75
CHAF1A-205ENST00000587580 INSRP06213 1382 aa32.26■■■□□ 2.75
CHAF1A-205ENST00000587580 HSP90AB2PQ58FF8 381 aa32.25■■■□□ 2.75
CHAF1A-205ENST00000587580 KNSTRNQ9Y448 316 aa32.25■■■□□ 2.75
CHAF1A-205ENST00000587580 MARCH10Q8NA82 808 aaPredicted RBP32.24■■■□□ 2.75
CHAF1A-205ENST00000587580 PPM1GO15355 546 aaPredicted RBP32.22■■■□□ 2.75
CHAF1A-205ENST00000587580 TNNT2P45379 298 aaPredicted RBP32.22■■■□□ 2.75
CHAF1A-205ENST00000587580 SBF2Q86WG5 1849 aa32.21■■■□□ 2.75
CHAF1A-205ENST00000587580 WASHC2AQ641Q2 1341 aa32.21■■■□□ 2.75
CHAF1A-205ENST00000587580 EN1Q05925 392 aaPredicted RBP32.2■■■□□ 2.75
CHAF1A-205ENST00000587580 NBPF6Q5VWK0 638 aa32.18■■■□□ 2.74
CHAF1A-205ENST00000587580 NBPF4Q96M43 638 aa32.18■■■□□ 2.74
CHAF1A-205ENST00000587580 POLKQ9UBT6 870 aa32.18■■■□□ 2.74
CHAF1A-205ENST00000587580 APBA3O96018 575 aa32.17■■■□□ 2.74
CHAF1A-205ENST00000587580 BCL9O00512 1426 aa32.17■■■□□ 2.74
CHAF1A-205ENST00000587580 MORC1Q86VD1 984 aa32.16■■■□□ 2.74
CHAF1A-205ENST00000587580 USHBP1Q8N6Y0 703 aa32.16■■■□□ 2.74
CHAF1A-205ENST00000587580 MEGF6O75095 1541 aa32.15■■■□□ 2.74
CHAF1A-205ENST00000587580 AMER1Q5JTC6 1135 aaPredicted RBP32.13■■■□□ 2.73
CHAF1A-205ENST00000587580 EZH2Q15910 746 aaKnown RBP32.11■■■□□ 2.73
CHAF1A-205ENST00000587580 PER1O15534 1290 aaPredicted RBP32.09■■■□□ 2.73
CHAF1A-205ENST00000587580 CAMKK2Q96RR4 588 aa32.09■■■□□ 2.73
CHAF1A-205ENST00000587580 SHANK3Q9BYB0 1731 aa32.09■■■□□ 2.73
CHAF1A-205ENST00000587580 BCL11BQ9C0K0 894 aaPredicted RBP32.08■■■□□ 2.73
CHAF1A-205ENST00000587580 PARD3Q8TEW0 1356 aa32.07■■■□□ 2.73
CHAF1A-205ENST00000587580 RAPGEF4Q8WZA2 1011 aa32.07■■■□□ 2.72
CHAF1A-205ENST00000587580 NHSQ6T4R5 1651 aa32.07■■■□□ 2.72
CHAF1A-205ENST00000587580 RREB1Q92766 1687 aa32.07■■■□□ 2.72
CHAF1A-205ENST00000587580 PTF1AQ7RTS3 328 aa32.06■■■□□ 2.72
CHAF1A-205ENST00000587580 DDX54Q8TDD1 881 aaKnown RBP32.06■■■□□ 2.72
CHAF1A-205ENST00000587580 NCAPD2Q15021 1401 aa32.04■■■□□ 2.72
CHAF1A-205ENST00000587580 TATP17735 454 aaPredicted RBP32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms