RNA–Protein interactions for RNA: ENST00000587486.6

CALR-205, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 957 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-205ENST00000587486 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
CALR-205ENST00000587486 WNK3Q9BYP7 1800 aa23.36■■□□□ 1.33
CALR-205ENST00000587486 CRB1P82279 1406 aa23.36■■□□□ 1.33
CALR-205ENST00000587486 SOX12O15370 315 aa23.35■■□□□ 1.33
CALR-205ENST00000587486 BARGINQ6ZT62 677 aa23.35■■□□□ 1.33
CALR-205ENST00000587486 PARP4Q9UKK3 1724 aaKnown RBP23.34■■□□□ 1.33
CALR-205ENST00000587486 EVA1CP58658 441 aa23.34■■□□□ 1.33
CALR-205ENST00000587486 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
CALR-205ENST00000587486 KRT27Q7Z3Y8 459 aa23.33■■□□□ 1.33
CALR-205ENST00000587486 WDR17Q8IZU2 1322 aa23.32■■□□□ 1.32
CALR-205ENST00000587486 TCP11L2Q8N4U5 519 aa23.31■■□□□ 1.32
CALR-205ENST00000587486 CARD14Q9BXL6 1004 aa23.31■■□□□ 1.32
CALR-205ENST00000587486 USP35Q9P2H5 1018 aa23.3■■□□□ 1.32
CALR-205ENST00000587486 THRAP3Q9Y2W1 955 aaKnown RBP23.3■■□□□ 1.32
CALR-205ENST00000587486 LRRC37A3O60309 1634 aa23.3■■□□□ 1.32
CALR-205ENST00000587486 FYB1O15117 783 aa23.29■■□□□ 1.32
CALR-205ENST00000587486 BLMP54132 1417 aaPredicted RBP23.28■■□□□ 1.32
CALR-205ENST00000587486 NSD3Q9BZ95 1437 aa23.28■■□□□ 1.32
CALR-205ENST00000587486 A0A0G2JS52 829 aa23.28■■□□□ 1.32
CALR-205ENST00000587486 MYT1Q01538 1121 aa23.28■■□□□ 1.32
CALR-205ENST00000587486 COG3Q96JB2 828 aa23.27■■□□□ 1.32
CALR-205ENST00000587486 C11orf95C9JLR9 678 aaPredicted RBP23.26■■□□□ 1.31
CALR-205ENST00000587486 ERBB3P21860 1342 aa23.26■■□□□ 1.31
CALR-205ENST00000587486 DISP2A7MBM2 1401 aa23.25■■□□□ 1.31
CALR-205ENST00000587486 CCDC125Q86Z20 511 aa23.25■■□□□ 1.31
CALR-205ENST00000587486 GGNBP2Q9H3C7 697 aa23.24■■□□□ 1.31
CALR-205ENST00000587486 TNS1Q9HBL0 1735 aaKnown RBP23.24■■□□□ 1.31
CALR-205ENST00000587486 FAM208AQ9UK61 1670 aaKnown RBP23.23■■□□□ 1.31
CALR-205ENST00000587486 PEAK1Q9H792 1746 aa23.23■■□□□ 1.31
CALR-205ENST00000587486 TOM1L2Q6ZVM7 507 aa23.23■■□□□ 1.31
CALR-205ENST00000587486 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
CALR-205ENST00000587486 FAM182BQ5T319 152 aa23.22■■□□□ 1.31
CALR-205ENST00000587486 CARD10Q9BWT7 1032 aa23.22■■□□□ 1.31
CALR-205ENST00000587486 MAP3K19Q56UN5 1328 aa23.22■■□□□ 1.31
CALR-205ENST00000587486 ANKRD26Q9UPS8 1709 aa23.22■■□□□ 1.31
CALR-205ENST00000587486 FBLN1P23142 703 aa23.21■■□□□ 1.31
CALR-205ENST00000587486 RTL1A6NKG5 1358 aa23.2■■□□□ 1.3
CALR-205ENST00000587486 CCDC7Q96M83 1385 aa23.2■■□□□ 1.3
CALR-205ENST00000587486 IP6K1Q92551 441 aa23.2■■□□□ 1.3
CALR-205ENST00000587486 CSB-PGBD3P0DP91 1061 aa23.17■■□□□ 1.3
CALR-205ENST00000587486 HOXC9P31274 260 aa23.17■■□□□ 1.3
CALR-205ENST00000587486 ANKRD24Q8TF21 1146 aa23.17■■□□□ 1.3
CALR-205ENST00000587486 KIF7Q2M1P5 1343 aa23.16■■□□□ 1.3
CALR-205ENST00000587486 POLR3GLQ9BT43 218 aa23.16■■□□□ 1.3
CALR-205ENST00000587486 CGNL1Q0VF96 1302 aa23.15■■□□□ 1.3
CALR-205ENST00000587486 RGPD2P0DJD1 1756 aa23.15■■□□□ 1.3
CALR-205ENST00000587486 RRS1Q15050 365 aaKnown RBP23.15■■□□□ 1.3
CALR-205ENST00000587486 CDCA7Q9BWT1 371 aaPredicted RBP23.14■■□□□ 1.29
CALR-205ENST00000587486 TNS2Q63HR2 1409 aa23.14■■□□□ 1.29
CALR-205ENST00000587486 PDE3BQ13370 1112 aa23.13■■□□□ 1.29
CALR-205ENST00000587486 FAM196AQ6ZSG2 479 aa23.13■■□□□ 1.29
CALR-205ENST00000587486 PANK3Q9H999 370 aa23.13■■□□□ 1.29
CALR-205ENST00000587486 KIF24Q5T7B8 1368 aa23.13■■□□□ 1.29
CALR-205ENST00000587486 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
CALR-205ENST00000587486 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
CALR-205ENST00000587486 SF3B2Q13435 895 aaKnown RBP23.12■■□□□ 1.29
CALR-205ENST00000587486 BCL9O00512 1426 aa23.11■■□□□ 1.29
CALR-205ENST00000587486 DEFB132Q7Z7B7 95 aa23.11■■□□□ 1.29
CALR-205ENST00000587486 NLRP2Q9NX02 1062 aa23.11■■□□□ 1.29
CALR-205ENST00000587486 AMPHP49418 695 aa23.1■■□□□ 1.29
CALR-205ENST00000587486 DDB1Q16531 1140 aa23.1■■□□□ 1.29
CALR-205ENST00000587486 FLT4P35916 1363 aa23.09■■□□□ 1.29
CALR-205ENST00000587486 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
CALR-205ENST00000587486 NSD2O96028 1365 aa23.08■■□□□ 1.29
CALR-205ENST00000587486 INSRP06213 1382 aa23.08■■□□□ 1.29
CALR-205ENST00000587486 MARCH10Q8NA82 808 aaPredicted RBP23.07■■□□□ 1.28
CALR-205ENST00000587486 SHANK3Q9BYB0 1731 aa23.06■■□□□ 1.28
CALR-205ENST00000587486 TRIM37O94972 964 aa23.06■■□□□ 1.28
CALR-205ENST00000587486 LTV1Q96GA3 475 aaPredicted RBP23.06■■□□□ 1.28
CALR-205ENST00000587486 EMILIN1Q9Y6C2 1016 aa23.06■■□□□ 1.28
CALR-205ENST00000587486 IL2RBP14784 551 aa23.05■■□□□ 1.28
CALR-205ENST00000587486 RREB1Q92766 1687 aa23.05■■□□□ 1.28
CALR-205ENST00000587486 HSP90AB2PQ58FF8 381 aa23.04■■□□□ 1.28
CALR-205ENST00000587486 SMG6Q86US8 1419 aaKnown RBP23.04■■□□□ 1.28
CALR-205ENST00000587486 MEGF6O75095 1541 aa23.03■■□□□ 1.28
CALR-205ENST00000587486 NCAPD2Q15021 1401 aa23.03■■□□□ 1.28
CALR-205ENST00000587486 BAG6P46379 1132 aa23.03■■□□□ 1.28
CALR-205ENST00000587486 RGPD3A6NKT7 1758 aaPredicted RBP23.03■■□□□ 1.28
CALR-205ENST00000587486 RGPD4Q7Z3J3 1758 aa23.03■■□□□ 1.28
CALR-205ENST00000587486 WASHC2AQ641Q2 1341 aa23.03■■□□□ 1.28
CALR-205ENST00000587486 NHSQ6T4R5 1651 aa23.01■■□□□ 1.27
CALR-205ENST00000587486 EXOC5O00471 708 aa23.01■■□□□ 1.27
CALR-205ENST00000587486 NBPF6Q5VWK0 638 aa23.01■■□□□ 1.27
CALR-205ENST00000587486 NBPF4Q96M43 638 aa23.01■■□□□ 1.27
CALR-205ENST00000587486 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
CALR-205ENST00000587486 EN1Q05925 392 aaPredicted RBP23■■□□□ 1.27
CALR-205ENST00000587486 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
CALR-205ENST00000587486 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
CALR-205ENST00000587486 CAMKK2Q96RR4 588 aa22.99■■□□□ 1.27
CALR-205ENST00000587486 NUP188Q5SRE5 1749 aa22.99■■□□□ 1.27
CALR-205ENST00000587486 PARD3Q8TEW0 1356 aa22.98■■□□□ 1.27
CALR-205ENST00000587486 PTF1AQ7RTS3 328 aa22.97■■□□□ 1.27
CALR-205ENST00000587486 APBA3O96018 575 aa22.96■■□□□ 1.27
CALR-205ENST00000587486 KNSTRNQ9Y448 316 aa22.96■■□□□ 1.27
CALR-205ENST00000587486 EZH2Q15910 746 aaKnown RBP22.95■■□□□ 1.26
CALR-205ENST00000587486 PKD1L3Q7Z443 1732 aa22.94■■□□□ 1.26
CALR-205ENST00000587486 TNNT2P45379 298 aaPredicted RBP22.94■■□□□ 1.26
CALR-205ENST00000587486 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
CALR-205ENST00000587486 BCL11BQ9C0K0 894 aaPredicted RBP22.94■■□□□ 1.26
CALR-205ENST00000587486 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms