RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ERFEQ4G0M1 354 aa9.74□□□□□ -0.85
VMP1-205ENST00000587470 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
VMP1-205ENST00000587470 VEGFBP49765 207 aa9.73□□□□□ -0.85
VMP1-205ENST00000587470 WDR4P57081 412 aaKnown RBP9.73□□□□□ -0.85
VMP1-205ENST00000587470 PTK2Q05397 1052 aa9.73□□□□□ -0.85
VMP1-205ENST00000587470 VASH1Q7L8A9 365 aaPredicted RBP9.73□□□□□ -0.85
VMP1-205ENST00000587470 GPSM3Q9Y4H4 160 aa9.73□□□□□ -0.85
VMP1-205ENST00000587470 ZBTB33Q86T24 672 aa9.72□□□□□ -0.85
VMP1-205ENST00000587470 ITPKCQ96DU7 683 aa9.71□□□□□ -0.86
VMP1-205ENST00000587470 ZFAND3Q9H8U3 227 aa9.71□□□□□ -0.86
VMP1-205ENST00000587470 SOBPA7XYQ1 873 aa9.7□□□□□ -0.86
VMP1-205ENST00000587470 BANK1Q8NDB2 785 aa9.7□□□□□ -0.86
VMP1-205ENST00000587470 PURBQ96QR8 312 aaKnown RBP9.7□□□□□ -0.86
VMP1-205ENST00000587470 TRIM34Q9BYJ4 488 aa9.7□□□□□ -0.86
VMP1-205ENST00000587470 CDV3Q9UKY7 258 aaKnown RBP9.7□□□□□ -0.86
VMP1-205ENST00000587470 ZIC2O95409 532 aaPredicted RBP9.69□□□□□ -0.86
VMP1-205ENST00000587470 SLC16A10Q8TF71 515 aa9.69□□□□□ -0.86
VMP1-205ENST00000587470 OCSTAMPQ9BR26 566 aa9.69□□□□□ -0.86
VMP1-205ENST00000587470 FSHRP23945 695 aa9.68□□□□□ -0.86
VMP1-205ENST00000587470 IRF7Q92985 503 aa9.68□□□□□ -0.86
VMP1-205ENST00000587470 SLC10A4Q96EP9 437 aa9.68□□□□□ -0.86
VMP1-205ENST00000587470 VSIG8P0DPA2 414 aa9.67□□□□□ -0.86
VMP1-205ENST00000587470 ADAM32Q8TC27 787 aa9.67□□□□□ -0.86
VMP1-205ENST00000587470 SCARF1Q14162 830 aa9.66□□□□□ -0.86
VMP1-205ENST00000587470 CCDC116Q8IYX3 515 aa9.66□□□□□ -0.86
VMP1-205ENST00000587470 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
VMP1-205ENST00000587470 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
VMP1-205ENST00000587470 SOCS7O14512 581 aa9.65□□□□□ -0.86
VMP1-205ENST00000587470 KCTD15Q96SI1 283 aaPredicted RBP9.65□□□□□ -0.86
VMP1-205ENST00000587470 MEIOBQ8N635 442 aa9.64□□□□□ -0.87
VMP1-205ENST00000587470 NBPF20Q3BBV1 942 aa9.62□□□□□ -0.87
VMP1-205ENST00000587470 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
VMP1-205ENST00000587470 ZBBXA8MT70 800 aa9.61□□□□□ -0.87
VMP1-205ENST00000587470 APBB1O00213 710 aa9.61□□□□□ -0.87
VMP1-205ENST00000587470 DHX9Q08211 1270 aaKnown RBP9.61□□□□□ -0.87
VMP1-205ENST00000587470 PPP1R26Q5T8A7 1209 aaPredicted RBP9.61□□□□□ -0.87
VMP1-205ENST00000587470 ZSCAN1Q8NBB4 408 aa9.61□□□□□ -0.87
VMP1-205ENST00000587470 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
VMP1-205ENST00000587470 UPP2O95045 317 aa9.6□□□□□ -0.87
VMP1-205ENST00000587470 LINC00528Q8N1L1 170 aa9.6□□□□□ -0.87
VMP1-205ENST00000587470 MTMR14Q8NCE2 650 aa9.6□□□□□ -0.87
VMP1-205ENST00000587470 SOS2Q07890 1332 aaPredicted RBP9.59□□□□□ -0.87
VMP1-205ENST00000587470 INTS6LQ5JSJ4 861 aaKnown RBP9.59□□□□□ -0.87
VMP1-205ENST00000587470 C6orf118Q5T5N4 469 aa9.59□□□□□ -0.87
VMP1-205ENST00000587470 SNRKQ9NRH2 765 aa9.59□□□□□ -0.87
VMP1-205ENST00000587470 TSEN34Q9BSV6 310 aaKnown RBP9.58□□□□□ -0.88
VMP1-205ENST00000587470 DNMT3LQ9UJW3 386 aa9.58□□□□□ -0.88
VMP1-205ENST00000587470 FBXO45P0C2W1 286 aa9.57□□□□□ -0.88
VMP1-205ENST00000587470 BMP2P12643 396 aa9.57□□□□□ -0.88
VMP1-205ENST00000587470 NDUFB9Q9Y6M9 179 aa9.57□□□□□ -0.88
VMP1-205ENST00000587470 PPFIA3O75145 1194 aa9.56□□□□□ -0.88
VMP1-205ENST00000587470 Q6ZVU0 165 aa9.56□□□□□ -0.88
VMP1-205ENST00000587470 ESPNB1AK53 854 aa9.55□□□□□ -0.88
VMP1-205ENST00000587470 MAN1A2O60476 641 aa9.54□□□□□ -0.88
VMP1-205ENST00000587470 MCCD1P59942 119 aaPredicted RBP9.54□□□□□ -0.88
VMP1-205ENST00000587470 NR1H3Q13133 447 aa9.54□□□□□ -0.88
VMP1-205ENST00000587470 SEPT12Q8IYM1 358 aa9.54□□□□□ -0.88
VMP1-205ENST00000587470 PCDHB9Q9Y5E1 797 aa9.54□□□□□ -0.88
VMP1-205ENST00000587470 RAB15P59190 212 aa9.53□□□□□ -0.88
VMP1-205ENST00000587470 CBLBQ13191 982 aa9.53□□□□□ -0.88
VMP1-205ENST00000587470 ZNF592Q92610 1267 aa9.53□□□□□ -0.88
VMP1-205ENST00000587470 PRM3Q9NNZ6 103 aa9.53□□□□□ -0.88
VMP1-205ENST00000587470 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
VMP1-205ENST00000587470 ERVH48-1M5A8F1 160 aa9.52□□□□□ -0.89
VMP1-205ENST00000587470 GPR37L1O60883 481 aa9.52□□□□□ -0.89
VMP1-205ENST00000587470 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
VMP1-205ENST00000587470 TMPRSS4Q9NRS4 437 aa9.52□□□□□ -0.89
VMP1-205ENST00000587470 GIGYF1O75420 1035 aaPredicted RBP9.51□□□□□ -0.89
VMP1-205ENST00000587470 KRT76Q01546 638 aa9.51□□□□□ -0.89
VMP1-205ENST00000587470 CCDC125Q86Z20 511 aa9.51□□□□□ -0.89
VMP1-205ENST00000587470 FAM181BA6NEQ2 426 aa9.5□□□□□ -0.89
VMP1-205ENST00000587470 GPR161Q8N6U8 529 aaKnown RBP9.5□□□□□ -0.89
VMP1-205ENST00000587470 ZNF784Q8NCA9 323 aaPredicted RBP9.5□□□□□ -0.89
VMP1-205ENST00000587470 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
VMP1-205ENST00000587470 SPINT1O43278 529 aa9.48□□□□□ -0.89
VMP1-205ENST00000587470 LILRA1O75019 489 aa9.48□□□□□ -0.89
VMP1-205ENST00000587470 GSK3AP49840 483 aa9.48□□□□□ -0.89
VMP1-205ENST00000587470 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
VMP1-205ENST00000587470 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
VMP1-205ENST00000587470 ADD1P35611 737 aaKnown RBP9.47□□□□□ -0.89
VMP1-205ENST00000587470 RELBQ01201 579 aa9.47□□□□□ -0.89
VMP1-205ENST00000587470 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
VMP1-205ENST00000587470 ADH1AP07327 375 aa9.46□□□□□ -0.9
VMP1-205ENST00000587470 PTSQ03393 145 aa9.46□□□□□ -0.9
VMP1-205ENST00000587470 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
VMP1-205ENST00000587470 NANOS1Q8WY41 292 aaKnown RBP9.44□□□□□ -0.9
VMP1-205ENST00000587470 CYLDQ9NQC7 956 aa9.44□□□□□ -0.9
VMP1-205ENST00000587470 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
VMP1-205ENST00000587470 PTGIRP43119 386 aa9.43□□□□□ -0.9
VMP1-205ENST00000587470 KDF1Q8NAX2 398 aaPredicted RBP9.43□□□□□ -0.9
VMP1-205ENST00000587470 ZNF395Q9H8N7 513 aaPredicted RBP9.43□□□□□ -0.9
VMP1-205ENST00000587470 FIGNL2A6NMB9 653 aa9.42□□□□□ -0.9
VMP1-205ENST00000587470 EIF4G2P78344 907 aaKnown RBP eCLIP9.42□□□□□ -0.9
VMP1-205ENST00000587470 IRF5Q13568 498 aa9.42□□□□□ -0.9
VMP1-205ENST00000587470 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
VMP1-205ENST00000587470 GDPD2Q9HCC8 539 aa9.42□□□□□ -0.9
VMP1-205ENST00000587470 CEP126Q9P2H0 1117 aa9.42□□□□□ -0.9
VMP1-205ENST00000587470 CTSOP43234 321 aaPredicted RBP9.41□□□□□ -0.9
VMP1-205ENST00000587470 MCM6Q14566 821 aa9.41□□□□□ -0.9
VMP1-205ENST00000587470 CCDC155Q8N6L0 562 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms