RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 CARD11Q9BXL7 1154 aa21.68■■□□□ 1.06
PRKCSH-204ENST00000587290 CD163L1Q9NR16 1453 aa21.67■■□□□ 1.06
PRKCSH-204ENST00000587290 LTN1O94822 1766 aa21.66■■□□□ 1.06
PRKCSH-204ENST00000587290 ARHGEF25Q86VW2 580 aa21.66■■□□□ 1.06
PRKCSH-204ENST00000587290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.66■■□□□ 1.06
PRKCSH-204ENST00000587290 ZNF692Q9BU19 519 aaPredicted RBP21.66■■□□□ 1.06
PRKCSH-204ENST00000587290 WDR17Q8IZU2 1322 aa21.65■■□□□ 1.06
PRKCSH-204ENST00000587290 TTC21AQ8NDW8 1320 aa21.65■■□□□ 1.06
PRKCSH-204ENST00000587290 OVOS2A0A0G2JMS6 1433 aa21.64■■□□□ 1.06
PRKCSH-204ENST00000587290 OVOS2A0A0J9YW53 1432 aa21.64■■□□□ 1.06
PRKCSH-204ENST00000587290 OVOS2Q6IE36 1432 aa21.64■■□□□ 1.06
PRKCSH-204ENST00000587290 TONSLQ96HA7 1378 aa21.64■■□□□ 1.06
PRKCSH-204ENST00000587290 SBNO2Q9Y2G9 1366 aa21.64■■□□□ 1.06
PRKCSH-204ENST00000587290 USP54Q70EL1 1684 aa21.64■■□□□ 1.05
PRKCSH-204ENST00000587290 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
PRKCSH-204ENST00000587290 PTF1AQ7RTS3 328 aa21.63■■□□□ 1.05
PRKCSH-204ENST00000587290 DDB1Q16531 1140 aa21.62■■□□□ 1.05
PRKCSH-204ENST00000587290 NME9Q86XW9 330 aa21.62■■□□□ 1.05
PRKCSH-204ENST00000587290 KCNH5Q8NCM2 988 aa21.62■■□□□ 1.05
PRKCSH-204ENST00000587290 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
PRKCSH-204ENST00000587290 CSB-PGBD3P0DP91 1061 aa21.61■■□□□ 1.05
PRKCSH-204ENST00000587290 SLC12A5Q9H2X9 1139 aa21.6■■□□□ 1.05
PRKCSH-204ENST00000587290 RGPD3A6NKT7 1758 aaPredicted RBP21.59■■□□□ 1.05
PRKCSH-204ENST00000587290 RGPD4Q7Z3J3 1758 aa21.59■■□□□ 1.05
PRKCSH-204ENST00000587290 MARCH10Q8NA82 808 aaPredicted RBP21.58■■□□□ 1.05
PRKCSH-204ENST00000587290 CARD10Q9BWT7 1032 aa21.57■■□□□ 1.04
PRKCSH-204ENST00000587290 A0A1W2PP64 1363 aa21.57■■□□□ 1.04
PRKCSH-204ENST00000587290 USP31Q70CQ4 1352 aa21.56■■□□□ 1.04
PRKCSH-204ENST00000587290 ABCC6O95255 1503 aa21.55■■□□□ 1.04
PRKCSH-204ENST00000587290 EDC4Q6P2E9 1401 aaKnown RBP21.53■■□□□ 1.04
PRKCSH-204ENST00000587290 NBPF14Q5TI25 921 aa21.52■■□□□ 1.04
PRKCSH-204ENST00000587290 HDGFL2Q7Z4V5 671 aaPredicted RBP21.52■■□□□ 1.04
PRKCSH-204ENST00000587290 ANO8Q9HCE9 1232 aaPredicted RBP21.52■■□□□ 1.04
PRKCSH-204ENST00000587290 TNS2Q63HR2 1409 aa21.52■■□□□ 1.04
PRKCSH-204ENST00000587290 KAT6BQ8WYB5 2073 aa21.52■■□□□ 1.04
PRKCSH-204ENST00000587290 ERBB3P21860 1342 aa21.51■■□□□ 1.03
PRKCSH-204ENST00000587290 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
PRKCSH-204ENST00000587290 ST20-MTHFSA0A0A6YYL1 179 aa21.5■■□□□ 1.03
PRKCSH-204ENST00000587290 TESK2Q96S53 571 aa21.5■■□□□ 1.03
PRKCSH-204ENST00000587290 CDCA7Q9BWT1 371 aaPredicted RBP21.5■■□□□ 1.03
PRKCSH-204ENST00000587290 BCL11BQ9C0K0 894 aaPredicted RBP21.5■■□□□ 1.03
PRKCSH-204ENST00000587290 CASZ1Q86V15 1759 aa21.49■■□□□ 1.03
PRKCSH-204ENST00000587290 C11orf95C9JLR9 678 aaPredicted RBP21.49■■□□□ 1.03
PRKCSH-204ENST00000587290 NLRP2Q9NX02 1062 aa21.49■■□□□ 1.03
PRKCSH-204ENST00000587290 NHSQ6T4R5 1651 aa21.49■■□□□ 1.03
PRKCSH-204ENST00000587290 RGPD2P0DJD1 1756 aa21.48■■□□□ 1.03
PRKCSH-204ENST00000587290 BCL9O00512 1426 aa21.47■■□□□ 1.03
PRKCSH-204ENST00000587290 EXOC5O00471 708 aa21.47■■□□□ 1.03
PRKCSH-204ENST00000587290 PLSCR1O15162 318 aa21.47■■□□□ 1.03
PRKCSH-204ENST00000587290 KCNQ2O43526 872 aa21.47■■□□□ 1.03
PRKCSH-204ENST00000587290 PROM2Q8N271 834 aa21.47■■□□□ 1.03
PRKCSH-204ENST00000587290 PDGFDQ9GZP0 370 aaPredicted RBP21.47■■□□□ 1.03
PRKCSH-204ENST00000587290 TERF2IPQ9NYB0 399 aa21.47■■□□□ 1.03
PRKCSH-204ENST00000587290 ANKRD24Q8TF21 1146 aa21.46■■□□□ 1.03
PRKCSH-204ENST00000587290 BTAF1O14981 1849 aa21.45■■□□□ 1.03
PRKCSH-204ENST00000587290 FBLN1P23142 703 aa21.45■■□□□ 1.02
PRKCSH-204ENST00000587290 ACSBG1Q96GR2 724 aa21.45■■□□□ 1.02
PRKCSH-204ENST00000587290 LTV1Q96GA3 475 aaPredicted RBP21.43■■□□□ 1.02
PRKCSH-204ENST00000587290 FAM208AQ9UK61 1670 aaKnown RBP21.42■■□□□ 1.02
PRKCSH-204ENST00000587290 IL2RBP14784 551 aa21.41■■□□□ 1.02
PRKCSH-204ENST00000587290 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-204ENST00000587290 TXNRD1Q16881 649 aa21.41■■□□□ 1.02
PRKCSH-204ENST00000587290 SPON1Q9HCB6 807 aa21.41■■□□□ 1.02
PRKCSH-204ENST00000587290 PUS7Q96PZ0 661 aaKnown RBP21.4■■□□□ 1.02
PRKCSH-204ENST00000587290 USP47Q96K76 1375 aa21.39■■□□□ 1.02
PRKCSH-204ENST00000587290 PPP1R1BQ9UD71 204 aaPredicted RBP21.39■■□□□ 1.01
PRKCSH-204ENST00000587290 MYOM1P52179 1685 aa21.39■■□□□ 1.01
PRKCSH-204ENST00000587290 SHANK3Q9BYB0 1731 aa21.38■■□□□ 1.01
PRKCSH-204ENST00000587290 NINLQ9Y2I6 1382 aa21.38■■□□□ 1.01
PRKCSH-204ENST00000587290 MAP3K19Q56UN5 1328 aa21.38■■□□□ 1.01
PRKCSH-204ENST00000587290 IP6K1Q92551 441 aa21.38■■□□□ 1.01
PRKCSH-204ENST00000587290 KIF20BQ96Q89 1820 aa21.37■■□□□ 1.01
PRKCSH-204ENST00000587290 ZBTB7AO95365 584 aa21.37■■□□□ 1.01
PRKCSH-204ENST00000587290 COG3Q96JB2 828 aa21.37■■□□□ 1.01
PRKCSH-204ENST00000587290 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
PRKCSH-204ENST00000587290 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
PRKCSH-204ENST00000587290 DOT1LQ8TEK3 1739 aa21.36■■□□□ 1.01
PRKCSH-204ENST00000587290 HOXC9P31274 260 aa21.34■■□□□ 1.01
PRKCSH-204ENST00000587290 RRS1Q15050 365 aaKnown RBP21.33■■□□□ 1.01
PRKCSH-204ENST00000587290 DDX54Q8TDD1 881 aaKnown RBP21.33■■□□□ 1.01
PRKCSH-204ENST00000587290 GGNBP2Q9H3C7 697 aa21.33■■□□□ 1.01
PRKCSH-204ENST00000587290 STK32BQ9NY57 414 aa21.33■■□□□ 1.01
PRKCSH-204ENST00000587290 ATF5Q9Y2D1 282 aaPredicted RBP21.33■■□□□ 1.01
PRKCSH-204ENST00000587290 AMPHP49418 695 aa21.32■■□□□ 1
PRKCSH-204ENST00000587290 SLC15A2Q16348 729 aa21.32■■□□□ 1
PRKCSH-204ENST00000587290 MEGF6O75095 1541 aa21.32■■□□□ 1
PRKCSH-204ENST00000587290 TMF1P82094 1093 aa21.31■■□□□ 1
PRKCSH-204ENST00000587290 TUBGCP6Q96RT7 1819 aa21.3■■□□□ 1
PRKCSH-204ENST00000587290 FYB1O15117 783 aa21.29■■□□□ 1
PRKCSH-204ENST00000587290 PTGER2P43116 358 aa21.29■■□□□ 1
PRKCSH-204ENST00000587290 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
PRKCSH-204ENST00000587290 LRRC4BQ9NT99 713 aa21.28■■□□□ 1
PRKCSH-204ENST00000587290 ZNF827Q17R98 1081 aa21.27■■□□□ 1
PRKCSH-204ENST00000587290 KCNQ4P56696 695 aa21.26■□□□□ 0.99
PRKCSH-204ENST00000587290 UTRNP46939 3433 aa21.26■□□□□ 0.99
PRKCSH-204ENST00000587290 RTL1A6NKG5 1358 aa21.25■□□□□ 0.99
PRKCSH-204ENST00000587290 LY75O60449 1722 aa21.25■□□□□ 0.99
PRKCSH-204ENST00000587290 SYTL4Q96C24 671 aaPredicted RBP21.25■□□□□ 0.99
PRKCSH-204ENST00000587290 SLC24A1O60721 1099 aa21.24■□□□□ 0.99
PRKCSH-204ENST00000587290 NBPF6Q5VWK0 638 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms