RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 ZBTB7AO95365 584 aa21.28■■□□□ 1
LRFN3-203ENST00000587257 NBPF1Q3BBV0 1214 aa21.28■■□□□ 1
LRFN3-203ENST00000587257 PTF1AQ7RTS3 328 aa21.28■■□□□ 1
LRFN3-203ENST00000587257 PDGFDQ9GZP0 370 aaPredicted RBP21.27■■□□□ 1
LRFN3-203ENST00000587257 MARCH10Q8NA82 808 aaPredicted RBP21.26■□□□□ 0.99
LRFN3-203ENST00000587257 CABP1Q9NZU7 370 aa21.26■□□□□ 0.99
LRFN3-203ENST00000587257 CPSF1Q10570 1443 aaKnown RBP21.25■□□□□ 0.99
LRFN3-203ENST00000587257 PROM2Q8N271 834 aa21.25■□□□□ 0.99
LRFN3-203ENST00000587257 STK32BQ9NY57 414 aa21.25■□□□□ 0.99
LRFN3-203ENST00000587257 PTGER2P43116 358 aa21.24■□□□□ 0.99
LRFN3-203ENST00000587257 ATF5Q9Y2D1 282 aaPredicted RBP21.23■□□□□ 0.99
LRFN3-203ENST00000587257 AXIN2Q9Y2T1 843 aa21.23■□□□□ 0.99
LRFN3-203ENST00000587257 SBF2Q86WG5 1849 aa21.22■□□□□ 0.99
LRFN3-203ENST00000587257 MYOM1P52179 1685 aa21.22■□□□□ 0.99
LRFN3-203ENST00000587257 CSB-PGBD3P0DP91 1061 aa21.22■□□□□ 0.99
LRFN3-203ENST00000587257 TXNRD1Q16881 649 aa21.22■□□□□ 0.99
LRFN3-203ENST00000587257 ZNF784Q8NCA9 323 aaPredicted RBP21.22■□□□□ 0.99
LRFN3-203ENST00000587257 KCNH5Q8NCM2 988 aa21.21■□□□□ 0.99
LRFN3-203ENST00000587257 CARD10Q9BWT7 1032 aa21.21■□□□□ 0.99
LRFN3-203ENST00000587257 PIK3C2AO00443 1686 aa21.21■□□□□ 0.99
LRFN3-203ENST00000587257 ARHGEF25Q86VW2 580 aa21.2■□□□□ 0.98
LRFN3-203ENST00000587257 FHDC1Q9C0D6 1143 aaPredicted RBP21.2■□□□□ 0.98
LRFN3-203ENST00000587257 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
LRFN3-203ENST00000587257 WNK3Q9BYP7 1800 aa21.2■□□□□ 0.98
LRFN3-203ENST00000587257 QRICH2Q9H0J4 1663 aa21.19■□□□□ 0.98
LRFN3-203ENST00000587257 COL18A1P39060 1754 aa21.19■□□□□ 0.98
LRFN3-203ENST00000587257 SLC15A2Q16348 729 aa21.19■□□□□ 0.98
LRFN3-203ENST00000587257 EXOC5O00471 708 aa21.18■□□□□ 0.98
LRFN3-203ENST00000587257 SYT17Q9BSW7 474 aa21.18■□□□□ 0.98
LRFN3-203ENST00000587257 SOX12O15370 315 aa21.17■□□□□ 0.98
LRFN3-203ENST00000587257 EVC2Q86UK5 1308 aa21.17■□□□□ 0.98
LRFN3-203ENST00000587257 CCDC7Q96M83 1385 aa21.17■□□□□ 0.98
LRFN3-203ENST00000587257 TNS2Q63HR2 1409 aa21.17■□□□□ 0.98
LRFN3-203ENST00000587257 AKAP12Q02952 1782 aa21.16■□□□□ 0.98
LRFN3-203ENST00000587257 TTC21BQ7Z4L5 1316 aa21.16■□□□□ 0.98
LRFN3-203ENST00000587257 ZNF692Q9BU19 519 aaPredicted RBP21.15■□□□□ 0.98
LRFN3-203ENST00000587257 TTC21AQ8NDW8 1320 aa21.14■□□□□ 0.97
LRFN3-203ENST00000587257 SGIP1Q9BQI5 828 aa21.14■□□□□ 0.97
LRFN3-203ENST00000587257 TRPM1Q7Z4N2 1603 aa21.12■□□□□ 0.97
LRFN3-203ENST00000587257 NFAT5O94916 1531 aa21.12■□□□□ 0.97
LRFN3-203ENST00000587257 ABCC6O95255 1503 aa21.12■□□□□ 0.97
LRFN3-203ENST00000587257 ARXQ96QS3 562 aa21.11■□□□□ 0.97
LRFN3-203ENST00000587257 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
LRFN3-203ENST00000587257 NHSQ6T4R5 1651 aa21.09■□□□□ 0.97
LRFN3-203ENST00000587257 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
LRFN3-203ENST00000587257 ACSBG1Q96GR2 724 aa21.08■□□□□ 0.97
LRFN3-203ENST00000587257 UTRNP46939 3433 aa21.07■□□□□ 0.96
LRFN3-203ENST00000587257 KTN1Q86UP2 1357 aaKnown RBP21.07■□□□□ 0.96
LRFN3-203ENST00000587257 ERBB3P21860 1342 aa21.06■□□□□ 0.96
LRFN3-203ENST00000587257 C1QTNF8P60827 252 aa21.06■□□□□ 0.96
LRFN3-203ENST00000587257 NLRP2Q9NX02 1062 aa21.06■□□□□ 0.96
LRFN3-203ENST00000587257 PAPPAQ13219 1627 aa21.06■□□□□ 0.96
LRFN3-203ENST00000587257 IL2RBP14784 551 aa21.04■□□□□ 0.96
LRFN3-203ENST00000587257 RGPD5Q99666 1765 aa21.04■□□□□ 0.96
LRFN3-203ENST00000587257 ZNF827Q17R98 1081 aa21.03■□□□□ 0.96
LRFN3-203ENST00000587257 ROCK2O75116 1388 aaKnown RBP21.02■□□□□ 0.96
LRFN3-203ENST00000587257 GPR162Q16538 588 aa21.02■□□□□ 0.96
LRFN3-203ENST00000587257 L3MBTL2Q969R5 705 aa21.02■□□□□ 0.96
LRFN3-203ENST00000587257 USP31Q70CQ4 1352 aa21.01■□□□□ 0.95
LRFN3-203ENST00000587257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21■□□□□ 0.95
LRFN3-203ENST00000587257 LRRC4BQ9NT99 713 aa20.99■□□□□ 0.95
LRFN3-203ENST00000587257 POLD1P28340 1107 aa20.98■□□□□ 0.95
LRFN3-203ENST00000587257 KLHL34Q8N239 644 aa20.98■□□□□ 0.95
LRFN3-203ENST00000587257 SLC16A10Q8TF71 515 aa20.98■□□□□ 0.95
LRFN3-203ENST00000587257 SLC27A3Q5K4L6 730 aa20.97■□□□□ 0.95
LRFN3-203ENST00000587257 ANKRD24Q8TF21 1146 aa20.97■□□□□ 0.95
LRFN3-203ENST00000587257 BTAF1O14981 1849 aa20.97■□□□□ 0.95
LRFN3-203ENST00000587257 CHD4Q14839 1912 aa20.96■□□□□ 0.95
LRFN3-203ENST00000587257 MON2Q7Z3U7 1717 aa20.96■□□□□ 0.95
LRFN3-203ENST00000587257 GIGYF1O75420 1035 aaPredicted RBP20.96■□□□□ 0.95
LRFN3-203ENST00000587257 NME9Q86XW9 330 aa20.96■□□□□ 0.95
LRFN3-203ENST00000587257 AKT1S1Q96B36 256 aa20.96■□□□□ 0.95
LRFN3-203ENST00000587257 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
LRFN3-203ENST00000587257 SBNO2Q9Y2G9 1366 aa20.95■□□□□ 0.94
LRFN3-203ENST00000587257 USP54Q70EL1 1684 aa20.94■□□□□ 0.94
LRFN3-203ENST00000587257 DDX54Q8TDD1 881 aaKnown RBP20.92■□□□□ 0.94
LRFN3-203ENST00000587257 TFCP2L1Q9NZI6 479 aa20.92■□□□□ 0.94
LRFN3-203ENST00000587257 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
LRFN3-203ENST00000587257 HDGFL2Q7Z4V5 671 aaPredicted RBP20.91■□□□□ 0.94
LRFN3-203ENST00000587257 CD163L1Q9NR16 1453 aa20.91■□□□□ 0.94
LRFN3-203ENST00000587257 EDC4Q6P2E9 1401 aaKnown RBP20.9■□□□□ 0.94
LRFN3-203ENST00000587257 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
LRFN3-203ENST00000587257 SYTL4Q96C24 671 aaPredicted RBP20.89■□□□□ 0.93
LRFN3-203ENST00000587257 LTN1O94822 1766 aa20.89■□□□□ 0.93
LRFN3-203ENST00000587257 QSER1Q2KHR3 1735 aa20.87■□□□□ 0.93
LRFN3-203ENST00000587257 ANKRD36BQ8N2N9 1353 aa20.87■□□□□ 0.93
LRFN3-203ENST00000587257 NLGN2Q8NFZ4 835 aa20.87■□□□□ 0.93
LRFN3-203ENST00000587257 PRIM1P49642 420 aaKnown RBP20.86■□□□□ 0.93
LRFN3-203ENST00000587257 KCNQ4P56696 695 aa20.86■□□□□ 0.93
LRFN3-203ENST00000587257 IP6K1Q92551 441 aa20.86■□□□□ 0.93
LRFN3-203ENST00000587257 SIN3AQ96ST3 1273 aa20.86■□□□□ 0.93
LRFN3-203ENST00000587257 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
LRFN3-203ENST00000587257 LTV1Q96GA3 475 aaPredicted RBP20.85■□□□□ 0.93
LRFN3-203ENST00000587257 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
LRFN3-203ENST00000587257 GRIN3BO60391 1043 aa20.84■□□□□ 0.93
LRFN3-203ENST00000587257 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
LRFN3-203ENST00000587257 COL24A1Q17RW2 1714 aa20.84■□□□□ 0.93
LRFN3-203ENST00000587257 A0A1W2PP64 1363 aa20.84■□□□□ 0.93
LRFN3-203ENST00000587257 IFFO2Q5TF58 517 aa20.83■□□□□ 0.93
LRFN3-203ENST00000587257 CCNL1Q9UK58 526 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms