RNA–Protein interactions for RNA: ENST00000587136.1

PTBP1-212, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-212ENST00000587136 CARD14Q9BXL6 1004 aa29.17■■■□□ 2.26
PTBP1-212ENST00000587136 NSD3Q9BZ95 1437 aa29.17■■■□□ 2.26
PTBP1-212ENST00000587136 C11orf95C9JLR9 678 aaPredicted RBP29.16■■■□□ 2.26
PTBP1-212ENST00000587136 FAM98CQ17RN3 349 aaKnown RBP29.16■■■□□ 2.26
PTBP1-212ENST00000587136 FYB1O15117 783 aa29.15■■■□□ 2.26
PTBP1-212ENST00000587136 LARP1Q6PKG0 1096 aaKnown RBP29.15■■■□□ 2.26
PTBP1-212ENST00000587136 A0A0G2JS52 829 aa29.14■■■□□ 2.26
PTBP1-212ENST00000587136 MYT1Q01538 1121 aa29.14■■■□□ 2.26
PTBP1-212ENST00000587136 GGNBP2Q9H3C7 697 aa29.14■■■□□ 2.26
PTBP1-212ENST00000587136 AXIN2Q9Y2T1 843 aa29.14■■■□□ 2.26
PTBP1-212ENST00000587136 THSD7AQ9UPZ6 1657 aa29.14■■■□□ 2.26
PTBP1-212ENST00000587136 USP35Q9P2H5 1018 aa29.12■■■□□ 2.25
PTBP1-212ENST00000587136 CRB1P82279 1406 aa29.11■■■□□ 2.25
PTBP1-212ENST00000587136 ANKRD26Q9UPS8 1709 aa29.09■■■□□ 2.25
PTBP1-212ENST00000587136 UPF1Q92900 1129 aaKnown RBP eCLIP29.09■■■□□ 2.25
PTBP1-212ENST00000587136 KIF7Q2M1P5 1343 aa29.08■■■□□ 2.25
PTBP1-212ENST00000587136 WDR17Q8IZU2 1322 aa29.08■■■□□ 2.25
PTBP1-212ENST00000587136 WNK3Q9BYP7 1800 aa29.08■■■□□ 2.25
PTBP1-212ENST00000587136 CGNL1Q0VF96 1302 aa29.07■■■□□ 2.24
PTBP1-212ENST00000587136 BARGINQ6ZT62 677 aa29.07■■■□□ 2.24
PTBP1-212ENST00000587136 TOM1L2Q6ZVM7 507 aa29.07■■■□□ 2.24
PTBP1-212ENST00000587136 TCP11L2Q8N4U5 519 aa29.07■■■□□ 2.24
PTBP1-212ENST00000587136 THRAP3Q9Y2W1 955 aaKnown RBP29.07■■■□□ 2.24
PTBP1-212ENST00000587136 CSB-PGBD3P0DP91 1061 aa29.06■■■□□ 2.24
PTBP1-212ENST00000587136 PANK3Q9H999 370 aa29.06■■■□□ 2.24
PTBP1-212ENST00000587136 KRT27Q7Z3Y8 459 aa29.05■■■□□ 2.24
PTBP1-212ENST00000587136 BLMP54132 1417 aaPredicted RBP29.03■■■□□ 2.24
PTBP1-212ENST00000587136 PARP4Q9UKK3 1724 aaKnown RBP29.03■■■□□ 2.24
PTBP1-212ENST00000587136 MAP2P11137 1827 aaKnown RBP29.03■■■□□ 2.24
PTBP1-212ENST00000587136 MAP3K19Q56UN5 1328 aa29.02■■■□□ 2.24
PTBP1-212ENST00000587136 FAM208AQ9UK61 1670 aaKnown RBP29.02■■■□□ 2.24
PTBP1-212ENST00000587136 FBLN1P23142 703 aa29.01■■■□□ 2.23
PTBP1-212ENST00000587136 IP6K1Q92551 441 aa29.01■■■□□ 2.23
PTBP1-212ENST00000587136 AMPHP49418 695 aa29■■■□□ 2.23
PTBP1-212ENST00000587136 ERBB3P21860 1342 aa28.99■■■□□ 2.23
PTBP1-212ENST00000587136 CARD10Q9BWT7 1032 aa28.99■■■□□ 2.23
PTBP1-212ENST00000587136 ANKRD24Q8TF21 1146 aa28.98■■■□□ 2.23
PTBP1-212ENST00000587136 RRS1Q15050 365 aaKnown RBP28.97■■■□□ 2.23
PTBP1-212ENST00000587136 RTL1A6NKG5 1358 aa28.97■■■□□ 2.23
PTBP1-212ENST00000587136 CCDC7Q96M83 1385 aa28.97■■■□□ 2.23
PTBP1-212ENST00000587136 HOXC9P31274 260 aa28.96■■■□□ 2.23
PTBP1-212ENST00000587136 RGPD2P0DJD1 1756 aa28.95■■■□□ 2.22
PTBP1-212ENST00000587136 LRRC37A3O60309 1634 aa28.94■■■□□ 2.22
PTBP1-212ENST00000587136 PEAK1Q9H792 1746 aa28.94■■■□□ 2.22
PTBP1-212ENST00000587136 NSD2O96028 1365 aa28.93■■■□□ 2.22
PTBP1-212ENST00000587136 NLRP2Q9NX02 1062 aa28.93■■■□□ 2.22
PTBP1-212ENST00000587136 KNSTRNQ9Y448 316 aa28.93■■■□□ 2.22
PTBP1-212ENST00000587136 WASHC2AQ641Q2 1341 aa28.93■■■□□ 2.22
PTBP1-212ENST00000587136 PDE3BQ13370 1112 aa28.92■■■□□ 2.22
PTBP1-212ENST00000587136 CCDC125Q86Z20 511 aa28.92■■■□□ 2.22
PTBP1-212ENST00000587136 CDCA7Q9BWT1 371 aaPredicted RBP28.92■■■□□ 2.22
PTBP1-212ENST00000587136 KIF24Q5T7B8 1368 aa28.91■■■□□ 2.22
PTBP1-212ENST00000587136 LTV1Q96GA3 475 aaPredicted RBP28.91■■■□□ 2.22
PTBP1-212ENST00000587136 FAM182BQ5T319 152 aa28.89■■■□□ 2.22
PTBP1-212ENST00000587136 RGPD1P0DJD0 1748 aa28.89■■■□□ 2.21
PTBP1-212ENST00000587136 FLT4P35916 1363 aa28.88■■■□□ 2.21
PTBP1-212ENST00000587136 DISP2A7MBM2 1401 aa28.87■■■□□ 2.21
PTBP1-212ENST00000587136 DDB1Q16531 1140 aa28.87■■■□□ 2.21
PTBP1-212ENST00000587136 EMILIN1Q9Y6C2 1016 aa28.86■■■□□ 2.21
PTBP1-212ENST00000587136 INSRP06213 1382 aa28.86■■■□□ 2.21
PTBP1-212ENST00000587136 SMG6Q86US8 1419 aaKnown RBP28.86■■■□□ 2.21
PTBP1-212ENST00000587136 EP400Q96L91 3159 aa28.85■■■□□ 2.21
PTBP1-212ENST00000587136 FAM196AQ6ZSG2 479 aa28.84■■■□□ 2.21
PTBP1-212ENST00000587136 TNNT2P45379 298 aaPredicted RBP28.83■■■□□ 2.21
PTBP1-212ENST00000587136 SF3B2Q13435 895 aaKnown RBP28.83■■■□□ 2.21
PTBP1-212ENST00000587136 HSP90AB2PQ58FF8 381 aa28.83■■■□□ 2.21
PTBP1-212ENST00000587136 PPM1GO15355 546 aaPredicted RBP28.82■■■□□ 2.2
PTBP1-212ENST00000587136 MORC1Q86VD1 984 aa28.82■■■□□ 2.2
PTBP1-212ENST00000587136 SBF2Q86WG5 1849 aa28.81■■■□□ 2.2
PTBP1-212ENST00000587136 IL2RBP14784 551 aa28.81■■■□□ 2.2
PTBP1-212ENST00000587136 AMER1Q5JTC6 1135 aaPredicted RBP28.81■■■□□ 2.2
PTBP1-212ENST00000587136 POLKQ9UBT6 870 aa28.81■■■□□ 2.2
PTBP1-212ENST00000587136 TNS1Q9HBL0 1735 aaKnown RBP28.8■■■□□ 2.2
PTBP1-212ENST00000587136 EXOC5O00471 708 aa28.8■■■□□ 2.2
PTBP1-212ENST00000587136 PER1O15534 1290 aaPredicted RBP28.8■■■□□ 2.2
PTBP1-212ENST00000587136 OVOS2A0A0G2JMS6 1433 aa28.78■■■□□ 2.2
PTBP1-212ENST00000587136 TNS2Q63HR2 1409 aa28.78■■■□□ 2.2
PTBP1-212ENST00000587136 ZEB1P37275 1124 aaPredicted RBP28.75■■■□□ 2.19
PTBP1-212ENST00000587136 NBPF6Q5VWK0 638 aa28.75■■■□□ 2.19
PTBP1-212ENST00000587136 NBPF4Q96M43 638 aa28.75■■■□□ 2.19
PTBP1-212ENST00000587136 KAT6BQ8WYB5 2073 aa28.74■■■□□ 2.19
PTBP1-212ENST00000587136 MARCH10Q8NA82 808 aaPredicted RBP28.73■■■□□ 2.19
PTBP1-212ENST00000587136 TRIM37O94972 964 aa28.72■■■□□ 2.19
PTBP1-212ENST00000587136 BAG6P46379 1132 aa28.71■■■□□ 2.19
PTBP1-212ENST00000587136 CC2D1BQ5T0F9 858 aaKnown RBP28.71■■■□□ 2.19
PTBP1-212ENST00000587136 DEFB132Q7Z7B7 95 aa28.71■■■□□ 2.19
PTBP1-212ENST00000587136 USHBP1Q8N6Y0 703 aa28.71■■■□□ 2.19
PTBP1-212ENST00000587136 NPC1L1Q9UHC9 1359 aa28.71■■■□□ 2.19
PTBP1-212ENST00000587136 SHANK3Q9BYB0 1731 aa28.69■■■□□ 2.18
PTBP1-212ENST00000587136 MEGF6O75095 1541 aa28.68■■■□□ 2.18
PTBP1-212ENST00000587136 BCL9O00512 1426 aa28.68■■■□□ 2.18
PTBP1-212ENST00000587136 RAPGEF4Q8WZA2 1011 aa28.67■■■□□ 2.18
PTBP1-212ENST00000587136 NCAPD2Q15021 1401 aa28.64■■■□□ 2.18
PTBP1-212ENST00000587136 EIF4A2Q14240 407 aaKnown RBP28.64■■■□□ 2.18
PTBP1-212ENST00000587136 APBA3O96018 575 aa28.63■■■□□ 2.17
PTBP1-212ENST00000587136 TATP17735 454 aaPredicted RBP28.63■■■□□ 2.17
PTBP1-212ENST00000587136 CNGB1Q14028 1251 aaPredicted RBP28.63■■■□□ 2.17
PTBP1-212ENST00000587136 EYA1Q99502 592 aa28.63■■■□□ 2.17
PTBP1-212ENST00000587136 EN1Q05925 392 aaPredicted RBP28.62■■■□□ 2.17
PTBP1-212ENST00000587136 ZCRB1Q8TBF4 217 aaKnown RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms