RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 CDCA8Q53HL2 280 aa26.6■■□□□ 1.85
TPM4-204ENST00000586499 BARGINQ6ZT62 677 aa26.6■■□□□ 1.85
TPM4-204ENST00000586499 USP54Q70EL1 1684 aa26.6■■□□□ 1.85
TPM4-204ENST00000586499 RGPD5Q99666 1765 aa26.59■■□□□ 1.85
TPM4-204ENST00000586499 CRB1P82279 1406 aa26.58■■□□□ 1.85
TPM4-204ENST00000586499 TOM1L2Q6ZVM7 507 aa26.58■■□□□ 1.85
TPM4-204ENST00000586499 OVOS2A0A0J9YW53 1432 aa26.57■■□□□ 1.84
TPM4-204ENST00000586499 BLMP54132 1417 aaPredicted RBP26.57■■□□□ 1.84
TPM4-204ENST00000586499 OVOS2Q6IE36 1432 aa26.57■■□□□ 1.84
TPM4-204ENST00000586499 HSPA5P11021 654 aaKnown RBP26.57■■□□□ 1.84
TPM4-204ENST00000586499 EIF4G2P78344 907 aaKnown RBP eCLIP26.56■■□□□ 1.843e-9■■■□□ 15.5
TPM4-204ENST00000586499 THRAP3Q9Y2W1 955 aaKnown RBP26.56■■□□□ 1.84
TPM4-204ENST00000586499 WDR17Q8IZU2 1322 aa26.56■■□□□ 1.84
TPM4-204ENST00000586499 DEFB132Q7Z7B7 95 aa26.54■■□□□ 1.84
TPM4-204ENST00000586499 CSB-PGBD3P0DP91 1061 aa26.53■■□□□ 1.84
TPM4-204ENST00000586499 COG3Q96JB2 828 aa26.53■■□□□ 1.84
TPM4-204ENST00000586499 FBLN1P23142 703 aa26.52■■□□□ 1.84
TPM4-204ENST00000586499 POLR3GLQ9BT43 218 aa26.52■■□□□ 1.84
TPM4-204ENST00000586499 LTN1O94822 1766 aa26.51■■□□□ 1.83
TPM4-204ENST00000586499 FYB1O15117 783 aa26.51■■□□□ 1.83
TPM4-204ENST00000586499 PDE3BQ13370 1112 aa26.51■■□□□ 1.83
TPM4-204ENST00000586499 SF3B2Q13435 895 aaKnown RBP26.51■■□□□ 1.83
TPM4-204ENST00000586499 GGNBP2Q9H3C7 697 aa26.51■■□□□ 1.83
TPM4-204ENST00000586499 MYOM1P52179 1685 aa26.5■■□□□ 1.83
TPM4-204ENST00000586499 CARD14Q9BXL6 1004 aa26.5■■□□□ 1.83
TPM4-204ENST00000586499 CARD10Q9BWT7 1032 aa26.48■■□□□ 1.83
TPM4-204ENST00000586499 ABCC6O95255 1503 aa26.47■■□□□ 1.83
TPM4-204ENST00000586499 FAM196AQ6ZSG2 479 aa26.46■■□□□ 1.83
TPM4-204ENST00000586499 PARP4Q9UKK3 1724 aaKnown RBP26.45■■□□□ 1.83
TPM4-204ENST00000586499 ERBB3P21860 1342 aa26.45■■□□□ 1.83
TPM4-204ENST00000586499 TRIM37O94972 964 aa26.44■■□□□ 1.82
TPM4-204ENST00000586499 ANKRD24Q8TF21 1146 aa26.44■■□□□ 1.82
TPM4-204ENST00000586499 IP6K1Q92551 441 aa26.44■■□□□ 1.82
TPM4-204ENST00000586499 MAP3K19Q56UN5 1328 aa26.43■■□□□ 1.82
TPM4-204ENST00000586499 NSD3Q9BZ95 1437 aa26.43■■□□□ 1.82
TPM4-204ENST00000586499 DDB1Q16531 1140 aa26.43■■□□□ 1.82
TPM4-204ENST00000586499 NLRP2Q9NX02 1062 aa26.43■■□□□ 1.82
TPM4-204ENST00000586499 C11orf95C9JLR9 678 aaPredicted RBP26.42■■□□□ 1.82
TPM4-204ENST00000586499 BAG6P46379 1132 aa26.41■■□□□ 1.82
TPM4-204ENST00000586499 RRS1Q15050 365 aaKnown RBP26.41■■□□□ 1.82
TPM4-204ENST00000586499 LTV1Q96GA3 475 aaPredicted RBP26.41■■□□□ 1.82
TPM4-204ENST00000586499 LRRC37A3O60309 1634 aa26.4■■□□□ 1.82
TPM4-204ENST00000586499 EN1Q05925 392 aaPredicted RBP26.4■■□□□ 1.82
TPM4-204ENST00000586499 WNK3Q9BYP7 1800 aa26.39■■□□□ 1.82
TPM4-204ENST00000586499 CCDC7Q96M83 1385 aa26.39■■□□□ 1.82
TPM4-204ENST00000586499 HOXC9P31274 260 aa26.39■■□□□ 1.82
TPM4-204ENST00000586499 AMPHP49418 695 aa26.39■■□□□ 1.82
TPM4-204ENST00000586499 KIF20BQ96Q89 1820 aa26.39■■□□□ 1.81
TPM4-204ENST00000586499 RGPD1P0DJD0 1748 aa26.39■■□□□ 1.81
TPM4-204ENST00000586499 DISP2A7MBM2 1401 aa26.39■■□□□ 1.81
TPM4-204ENST00000586499 CDCA7Q9BWT1 371 aaPredicted RBP26.38■■□□□ 1.81
TPM4-204ENST00000586499 TNS1Q9HBL0 1735 aaKnown RBP26.36■■□□□ 1.81
TPM4-204ENST00000586499 MARCH10Q8NA82 808 aaPredicted RBP26.36■■□□□ 1.81
TPM4-204ENST00000586499 EXOC5O00471 708 aa26.33■■□□□ 1.81
TPM4-204ENST00000586499 APBA3O96018 575 aa26.33■■□□□ 1.81
TPM4-204ENST00000586499 PANK3Q9H999 370 aa26.33■■□□□ 1.81
TPM4-204ENST00000586499 OVOS2A0A0G2JMS6 1433 aa26.32■■□□□ 1.8
TPM4-204ENST00000586499 PEAK1Q9H792 1746 aa26.32■■□□□ 1.8
TPM4-204ENST00000586499 EZH2Q15910 746 aaKnown RBP26.32■■□□□ 1.8
TPM4-204ENST00000586499 CGNL1Q0VF96 1302 aa26.31■■□□□ 1.8
TPM4-204ENST00000586499 IL2RBP14784 551 aa26.3■■□□□ 1.8
TPM4-204ENST00000586499 HSP90AB2PQ58FF8 381 aa26.28■■□□□ 1.8
TPM4-204ENST00000586499 PTF1AQ7RTS3 328 aa26.28■■□□□ 1.8
TPM4-204ENST00000586499 CAMKK2Q96RR4 588 aa26.28■■□□□ 1.8
TPM4-204ENST00000586499 RTL1A6NKG5 1358 aa26.28■■□□□ 1.8
TPM4-204ENST00000586499 EMILIN1Q9Y6C2 1016 aa26.27■■□□□ 1.8
TPM4-204ENST00000586499 RGPD2P0DJD1 1756 aa26.27■■□□□ 1.8
TPM4-204ENST00000586499 TNS2Q63HR2 1409 aa26.26■■□□□ 1.79
TPM4-204ENST00000586499 SBF2Q86WG5 1849 aa26.25■■□□□ 1.79
TPM4-204ENST00000586499 KIF7Q2M1P5 1343 aa26.24■■□□□ 1.79
TPM4-204ENST00000586499 NBPF6Q5VWK0 638 aa26.24■■□□□ 1.79
TPM4-204ENST00000586499 NBPF4Q96M43 638 aa26.24■■□□□ 1.79
TPM4-204ENST00000586499 FAM208AQ9UK61 1670 aaKnown RBP26.24■■□□□ 1.79
TPM4-204ENST00000586499 PPM1GO15355 546 aaPredicted RBP26.23■■□□□ 1.79
TPM4-204ENST00000586499 TNNT2P45379 298 aaPredicted RBP26.23■■□□□ 1.79
TPM4-204ENST00000586499 USHBP1Q8N6Y0 703 aa26.23■■□□□ 1.79
TPM4-204ENST00000586499 FLT4P35916 1363 aa26.22■■□□□ 1.79
TPM4-204ENST00000586499 INSRP06213 1382 aa26.21■■□□□ 1.79
TPM4-204ENST00000586499 PSDA5PKW4 1024 aaPredicted RBP26.21■■□□□ 1.79
TPM4-204ENST00000586499 BCL11BQ9C0K0 894 aaPredicted RBP26.21■■□□□ 1.79
TPM4-204ENST00000586499 BCL9O00512 1426 aa26.21■■□□□ 1.79
TPM4-204ENST00000586499 KIF24Q5T7B8 1368 aa26.2■■□□□ 1.78
TPM4-204ENST00000586499 SRCAPQ6ZRS2 3230 aa26.19■■□□□ 1.78
TPM4-204ENST00000586499 KCNQ2O43526 872 aa26.18■■□□□ 1.78
TPM4-204ENST00000586499 SMG6Q86US8 1419 aaKnown RBP26.18■■□□□ 1.78
TPM4-204ENST00000586499 DDX54Q8TDD1 881 aaKnown RBP26.18■■□□□ 1.78
TPM4-204ENST00000586499 ACSBG1Q96GR2 724 aa26.18■■□□□ 1.78
TPM4-204ENST00000586499 POLKQ9UBT6 870 aa26.18■■□□□ 1.78
TPM4-204ENST00000586499 MAP2P11137 1827 aaKnown RBP26.17■■□□□ 1.78
TPM4-204ENST00000586499 MEGF6O75095 1541 aa26.16■■□□□ 1.78
TPM4-204ENST00000586499 PARD3Q8TEW0 1356 aa26.16■■□□□ 1.78
TPM4-204ENST00000586499 ANKRD26Q9UPS8 1709 aa26.16■■□□□ 1.78
TPM4-204ENST00000586499 R3HDM1Q15032 1099 aaKnown RBP26.15■■□□□ 1.78
TPM4-204ENST00000586499 WASHC2AQ641Q2 1341 aa26.14■■□□□ 1.78
TPM4-204ENST00000586499 KNSTRNQ9Y448 316 aa26.14■■□□□ 1.78
TPM4-204ENST00000586499 RREB1Q92766 1687 aa26.13■■□□□ 1.77
TPM4-204ENST00000586499 PLSCR1O15162 318 aa26.13■■□□□ 1.77
TPM4-204ENST00000586499 ZCRB1Q8TBF4 217 aaKnown RBP26.12■■□□□ 1.77
TPM4-204ENST00000586499 NUP188Q5SRE5 1749 aa26.11■■□□□ 1.77
TPM4-204ENST00000586499 MORC1Q86VD1 984 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms