RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 COL3A1P02461 1466 aaPredicted RBP22.89■■□□□ 1.25
PRKCSH-203ENST00000586486 RGPD5Q99666 1765 aa22.89■■□□□ 1.25
PRKCSH-203ENST00000586486 AMPHP49418 695 aa22.89■■□□□ 1.25
PRKCSH-203ENST00000586486 IP6K1Q92551 441 aa22.89■■□□□ 1.25
PRKCSH-203ENST00000586486 NWD2Q9ULI1 1742 aa22.88■■□□□ 1.25
PRKCSH-203ENST00000586486 HOXC9P31274 260 aa22.88■■□□□ 1.25
PRKCSH-203ENST00000586486 ADAMTS2O95450 1211 aa22.86■■□□□ 1.25
PRKCSH-203ENST00000586486 CAMTA1Q9Y6Y1 1673 aa22.86■■□□□ 1.25
PRKCSH-203ENST00000586486 FAM83GA6ND36 823 aa22.86■■□□□ 1.25
PRKCSH-203ENST00000586486 PPM1GO15355 546 aaPredicted RBP22.86■■□□□ 1.25
PRKCSH-203ENST00000586486 CHRNA2Q15822 529 aa22.86■■□□□ 1.25
PRKCSH-203ENST00000586486 FAM208AQ9UK61 1670 aaKnown RBP22.85■■□□□ 1.25
PRKCSH-203ENST00000586486 NRAPQ86VF7 1730 aa22.85■■□□□ 1.25
PRKCSH-203ENST00000586486 SLIT2O94813 1529 aa22.85■■□□□ 1.25
PRKCSH-203ENST00000586486 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
PRKCSH-203ENST00000586486 MIER1Q8N108 512 aa22.84■■□□□ 1.25
PRKCSH-203ENST00000586486 CFAP53Q96M91 514 aa22.84■■□□□ 1.25
PRKCSH-203ENST00000586486 HSP90AB2PQ58FF8 381 aa22.83■■□□□ 1.25
PRKCSH-203ENST00000586486 AXIN2Q9Y2T1 843 aa22.83■■□□□ 1.25
PRKCSH-203ENST00000586486 COL5A2P05997 1499 aaPredicted RBP22.83■■□□□ 1.25
PRKCSH-203ENST00000586486 ILDR1Q86SU0 546 aaPredicted RBP22.82■■□□□ 1.24
PRKCSH-203ENST00000586486 CCER2I3L3R5 266 aa22.82■■□□□ 1.24
PRKCSH-203ENST00000586486 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.81■■□□□ 1.24
PRKCSH-203ENST00000586486 ERBB3P21860 1342 aa22.8■■□□□ 1.24
PRKCSH-203ENST00000586486 RGPD1P0DJD0 1748 aa22.8■■□□□ 1.24
PRKCSH-203ENST00000586486 MEX3CQ5U5Q3 659 aaKnown RBP22.79■■□□□ 1.24
PRKCSH-203ENST00000586486 FNBP4Q8N3X1 1017 aaPredicted RBP22.79■■□□□ 1.24
PRKCSH-203ENST00000586486 C8orf37Q96NL8 207 aa22.79■■□□□ 1.24
PRKCSH-203ENST00000586486 EIF4A2Q14240 407 aaKnown RBP22.78■■□□□ 1.24
PRKCSH-203ENST00000586486 BTG4Q9NY30 223 aa22.78■■□□□ 1.24
PRKCSH-203ENST00000586486 DIAPH1O60610 1272 aaKnown RBP22.77■■□□□ 1.24
PRKCSH-203ENST00000586486 CCDC184Q52MB2 194 aa22.77■■□□□ 1.24
PRKCSH-203ENST00000586486 ANKRD24Q8TF21 1146 aa22.77■■□□□ 1.24
PRKCSH-203ENST00000586486 NGLY1Q96IV0 654 aa22.77■■□□□ 1.24
PRKCSH-203ENST00000586486 IL13P35225 146 aa22.76■■□□□ 1.23
PRKCSH-203ENST00000586486 MRS2Q9HD23 443 aa22.76■■□□□ 1.23
PRKCSH-203ENST00000586486 WDR17Q8IZU2 1322 aa22.76■■□□□ 1.23
PRKCSH-203ENST00000586486 BCL9LQ86UU0 1499 aa22.75■■□□□ 1.23
PRKCSH-203ENST00000586486 RGPD2P0DJD1 1756 aa22.75■■□□□ 1.23
PRKCSH-203ENST00000586486 NCAPD2Q15021 1401 aa22.74■■□□□ 1.23
PRKCSH-203ENST00000586486 LTV1Q96GA3 475 aaPredicted RBP22.72■■□□□ 1.23
PRKCSH-203ENST00000586486 NUDCQ9Y266 331 aa22.72■■□□□ 1.23
PRKCSH-203ENST00000586486 CRB1P82279 1406 aa22.72■■□□□ 1.23
PRKCSH-203ENST00000586486 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
PRKCSH-203ENST00000586486 AFF2P51816 1311 aa22.71■■□□□ 1.23
PRKCSH-203ENST00000586486 IGSF1Q8N6C5 1336 aa22.71■■□□□ 1.23
PRKCSH-203ENST00000586486 CSB-PGBD3P0DP91 1061 aa22.7■■□□□ 1.22
PRKCSH-203ENST00000586486 EVA1CP58658 441 aa22.7■■□□□ 1.22
PRKCSH-203ENST00000586486 STRN4Q9NRL3 753 aa22.7■■□□□ 1.22
PRKCSH-203ENST00000586486 USP21Q9UK80 565 aa22.69■■□□□ 1.22
PRKCSH-203ENST00000586486 KDRP35968 1356 aa22.69■■□□□ 1.22
PRKCSH-203ENST00000586486 LARP1Q6PKG0 1096 aaKnown RBP22.68■■□□□ 1.22
PRKCSH-203ENST00000586486 PNISRQ8TF01 805 aaKnown RBP22.68■■□□□ 1.22
PRKCSH-203ENST00000586486 EYA1Q99502 592 aa22.68■■□□□ 1.22
PRKCSH-203ENST00000586486 NBPF6Q5VWK0 638 aa22.68■■□□□ 1.22
PRKCSH-203ENST00000586486 NBPF4Q96M43 638 aa22.68■■□□□ 1.22
PRKCSH-203ENST00000586486 CARD10Q9BWT7 1032 aa22.67■■□□□ 1.22
PRKCSH-203ENST00000586486 WNK3Q9BYP7 1800 aa22.67■■□□□ 1.22
PRKCSH-203ENST00000586486 ATRNO75882 1429 aa22.66■■□□□ 1.22
PRKCSH-203ENST00000586486 U2SURPO15042 1029 aaKnown RBP22.66■■□□□ 1.22
PRKCSH-203ENST00000586486 WDR43Q15061 677 aaKnown RBP eCLIP22.66■■□□□ 1.221e-6■■□□□ 14.5
PRKCSH-203ENST00000586486 VPS72Q15906 364 aa22.66■■□□□ 1.22
PRKCSH-203ENST00000586486 TOM1L2Q6ZVM7 507 aa22.66■■□□□ 1.22
PRKCSH-203ENST00000586486 NLRP2Q9NX02 1062 aa22.66■■□□□ 1.22
PRKCSH-203ENST00000586486 U2AF1L5P0DN76 240 aaPredicted RBP22.64■■□□□ 1.21
PRKCSH-203ENST00000586486 U2AF1Q01081 240 aaKnown RBP eCLIP22.64■■□□□ 1.21
PRKCSH-203ENST00000586486 SPATA31A5Q5VU36 1347 aa22.64■■□□□ 1.21
PRKCSH-203ENST00000586486 SPATA31A7Q8IWB4 1347 aa22.64■■□□□ 1.21
PRKCSH-203ENST00000586486 SPATA31A1Q5TZJ5 1347 aa22.63■■□□□ 1.21
PRKCSH-203ENST00000586486 PLEKHG2Q9H7P9 1386 aa22.63■■□□□ 1.21
PRKCSH-203ENST00000586486 PARP4Q9UKK3 1724 aaKnown RBP22.62■■□□□ 1.21
PRKCSH-203ENST00000586486 ZNF772Q68DY9 489 aaPredicted RBP22.61■■□□□ 1.21
PRKCSH-203ENST00000586486 SULT6B1Q6IMI4 303 aa22.61■■□□□ 1.21
PRKCSH-203ENST00000586486 TRPC5Q9UL62 973 aaPredicted RBP22.61■■□□□ 1.21
PRKCSH-203ENST00000586486 GLI3P10071 1580 aa22.61■■□□□ 1.21
PRKCSH-203ENST00000586486 USHBP1Q8N6Y0 703 aa22.6■■□□□ 1.21
PRKCSH-203ENST00000586486 THRAP3Q9Y2W1 955 aaKnown RBP22.6■■□□□ 1.21
PRKCSH-203ENST00000586486 FCHSD2O94868 740 aa22.6■■□□□ 1.21
PRKCSH-203ENST00000586486 AEBP1Q8IUX7 1158 aa22.6■■□□□ 1.21
PRKCSH-203ENST00000586486 RSPH6AQ9H0K4 717 aa22.6■■□□□ 1.21
PRKCSH-203ENST00000586486 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
PRKCSH-203ENST00000586486 DISP2A7MBM2 1401 aa22.59■■□□□ 1.21
PRKCSH-203ENST00000586486 HMOX1P09601 288 aa22.59■■□□□ 1.21
PRKCSH-203ENST00000586486 TCP11L2Q8N4U5 519 aa22.59■■□□□ 1.21
PRKCSH-203ENST00000586486 MEGF6O75095 1541 aa22.58■■□□□ 1.21
PRKCSH-203ENST00000586486 PKD1L3Q7Z443 1732 aa22.57■■□□□ 1.2
PRKCSH-203ENST00000586486 PNNQ9H307 717 aaKnown RBP22.57■■□□□ 1.2
PRKCSH-203ENST00000586486 CCDC9Q9Y3X0 531 aaKnown RBP22.57■■□□□ 1.2
PRKCSH-203ENST00000586486 BARGINQ6ZT62 677 aa22.56■■□□□ 1.2
PRKCSH-203ENST00000586486 FAM9BQ8IZU0 186 aa22.56■■□□□ 1.2
PRKCSH-203ENST00000586486 GJD4Q96KN9 370 aaPredicted RBP22.56■■□□□ 1.2
PRKCSH-203ENST00000586486 USP35Q9P2H5 1018 aa22.56■■□□□ 1.2
PRKCSH-203ENST00000586486 OVOS2A0A0G2JMS6 1433 aa22.56■■□□□ 1.2
PRKCSH-203ENST00000586486 THSD7AQ9UPZ6 1657 aa22.55■■□□□ 1.2
PRKCSH-203ENST00000586486 QTRT2Q9H974 415 aaKnown RBP22.55■■□□□ 1.2
PRKCSH-203ENST00000586486 PRKAR2BP31323 418 aa22.54■■□□□ 1.2
PRKCSH-203ENST00000586486 RAPGEF4Q8WZA2 1011 aa22.54■■□□□ 1.2
PRKCSH-203ENST00000586486 PLEKHF1Q96S99 279 aa22.54■■□□□ 1.2
PRKCSH-203ENST00000586486 RGS17Q9UGC6 210 aaPredicted RBP22.54■■□□□ 1.2
PRKCSH-203ENST00000586486 IL2RBP14784 551 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms