RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 AMPHP49418 695 aa15.01□□□□□ -0.01
CLIP3-203ENST00000586457 BARGINQ6ZT62 677 aa15.01□□□□□ -0.01
CLIP3-203ENST00000586457 NRAPQ86VF7 1730 aa15□□□□□ -0.01
CLIP3-203ENST00000586457 GGNBP2Q9H3C7 697 aa15□□□□□ -0.01
CLIP3-203ENST00000586457 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
CLIP3-203ENST00000586457 CRB1P82279 1406 aa15□□□□□ -0.01
CLIP3-203ENST00000586457 WDR17Q8IZU2 1322 aa14.99□□□□□ -0.01
CLIP3-203ENST00000586457 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
CLIP3-203ENST00000586457 COL5A2P05997 1499 aaPredicted RBP14.99□□□□□ -0.01
CLIP3-203ENST00000586457 FYB1O15117 783 aa14.98□□□□□ -0.01
CLIP3-203ENST00000586457 CDCA7Q9BWT1 371 aaPredicted RBP14.98□□□□□ -0.01
CLIP3-203ENST00000586457 CGNL1Q0VF96 1302 aa14.97□□□□□ -0.01
CLIP3-203ENST00000586457 FAM196AQ6ZSG2 479 aa14.97□□□□□ -0.01
CLIP3-203ENST00000586457 LTV1Q96GA3 475 aaPredicted RBP14.97□□□□□ -0.01
CLIP3-203ENST00000586457 DDB1Q16531 1140 aa14.96□□□□□ -0.01
CLIP3-203ENST00000586457 FAM182BQ5T319 152 aa14.96□□□□□ -0.01
CLIP3-203ENST00000586457 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.01
CLIP3-203ENST00000586457 CARD10Q9BWT7 1032 aa14.96□□□□□ -0.01
CLIP3-203ENST00000586457 C11orf95C9JLR9 678 aaPredicted RBP14.95□□□□□ -0.02
CLIP3-203ENST00000586457 IP6K1Q92551 441 aa14.95□□□□□ -0.02
CLIP3-203ENST00000586457 LMO7Q8WWI1 1683 aa14.94□□□□□ -0.02
CLIP3-203ENST00000586457 BLMP54132 1417 aaPredicted RBP14.94□□□□□ -0.02
CLIP3-203ENST00000586457 NSD3Q9BZ95 1437 aa14.94□□□□□ -0.02
CLIP3-203ENST00000586457 EXOC5O00471 708 aa14.94□□□□□ -0.02
CLIP3-203ENST00000586457 PPM1GO15355 546 aaPredicted RBP14.94□□□□□ -0.02
CLIP3-203ENST00000586457 BAG6P46379 1132 aa14.94□□□□□ -0.02
CLIP3-203ENST00000586457 CARD14Q9BXL6 1004 aa14.94□□□□□ -0.02
CLIP3-203ENST00000586457 PANK3Q9H999 370 aa14.94□□□□□ -0.02
CLIP3-203ENST00000586457 BRWD3Q6RI45 1802 aa14.94□□□□□ -0.02
CLIP3-203ENST00000586457 NFAT5O94916 1531 aa14.93□□□□□ -0.02
CLIP3-203ENST00000586457 KNSTRNQ9Y448 316 aa14.93□□□□□ -0.02
CLIP3-203ENST00000586457 CCDC7Q96M83 1385 aa14.93□□□□□ -0.02
CLIP3-203ENST00000586457 OVOS2A0A0J9YW53 1432 aa14.92□□□□□ -0.02
CLIP3-203ENST00000586457 OVOS2Q6IE36 1432 aa14.92□□□□□ -0.02
CLIP3-203ENST00000586457 RRS1Q15050 365 aaKnown RBP14.92□□□□□ -0.02
CLIP3-203ENST00000586457 MAP3K19Q56UN5 1328 aa14.92□□□□□ -0.02
CLIP3-203ENST00000586457 FBLN1P23142 703 aa14.91□□□□□ -0.02
CLIP3-203ENST00000586457 HOXC9P31274 260 aa14.91□□□□□ -0.02
CLIP3-203ENST00000586457 ERBB3P21860 1342 aa14.91□□□□□ -0.02
CLIP3-203ENST00000586457 TRIM37O94972 964 aa14.9□□□□□ -0.02
CLIP3-203ENST00000586457 IL2RBP14784 551 aa14.9□□□□□ -0.02
CLIP3-203ENST00000586457 ABCC6O95255 1503 aa14.9□□□□□ -0.02
CLIP3-203ENST00000586457 LTN1O94822 1766 aa14.9□□□□□ -0.02
CLIP3-203ENST00000586457 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
CLIP3-203ENST00000586457 COL18A1P39060 1754 aa14.89□□□□□ -0.03
CLIP3-203ENST00000586457 TNNT2P45379 298 aaPredicted RBP14.89□□□□□ -0.03
CLIP3-203ENST00000586457 USP54Q70EL1 1684 aa14.89□□□□□ -0.03
CLIP3-203ENST00000586457 RGPD5Q99666 1765 aa14.88□□□□□ -0.03
CLIP3-203ENST00000586457 APBA3O96018 575 aa14.88□□□□□ -0.03
CLIP3-203ENST00000586457 DEFB132Q7Z7B7 95 aa14.88□□□□□ -0.03
CLIP3-203ENST00000586457 MORC1Q86VD1 984 aa14.88□□□□□ -0.03
CLIP3-203ENST00000586457 THSD7AQ9UPZ6 1657 aa14.87□□□□□ -0.03
CLIP3-203ENST00000586457 RTL1A6NKG5 1358 aa14.86□□□□□ -0.03
CLIP3-203ENST00000586457 KIF20BQ96Q89 1820 aa14.86□□□□□ -0.03
CLIP3-203ENST00000586457 KIF7Q2M1P5 1343 aa14.86□□□□□ -0.03
CLIP3-203ENST00000586457 MYOM1P52179 1685 aa14.85□□□□□ -0.03
CLIP3-203ENST00000586457 EN1Q05925 392 aaPredicted RBP14.85□□□□□ -0.03
CLIP3-203ENST00000586457 RAPGEF4Q8WZA2 1011 aa14.85□□□□□ -0.03
CLIP3-203ENST00000586457 FLT4P35916 1363 aa14.85□□□□□ -0.03
CLIP3-203ENST00000586457 OVOS2A0A0G2JMS6 1433 aa14.84□□□□□ -0.03
CLIP3-203ENST00000586457 HSP90AB2PQ58FF8 381 aa14.84□□□□□ -0.03
CLIP3-203ENST00000586457 DDX54Q8TDD1 881 aaKnown RBP14.84□□□□□ -0.03
CLIP3-203ENST00000586457 KIF24Q5T7B8 1368 aa14.84□□□□□ -0.03
CLIP3-203ENST00000586457 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
CLIP3-203ENST00000586457 NSD2O96028 1365 aa14.83□□□□□ -0.04
CLIP3-203ENST00000586457 TATP17735 454 aaPredicted RBP14.82□□□□□ -0.04
CLIP3-203ENST00000586457 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
CLIP3-203ENST00000586457 MARCH10Q8NA82 808 aaPredicted RBP14.82□□□□□ -0.04
CLIP3-203ENST00000586457 PARP4Q9UKK3 1724 aaKnown RBP14.82□□□□□ -0.04
CLIP3-203ENST00000586457 EP400Q96L91 3159 aa14.82□□□□□ -0.04
CLIP3-203ENST00000586457 INSRP06213 1382 aa14.82□□□□□ -0.04
CLIP3-203ENST00000586457 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
CLIP3-203ENST00000586457 RGPD1P0DJD0 1748 aa14.8□□□□□ -0.04
CLIP3-203ENST00000586457 NBPF14Q5TI25 921 aa14.8□□□□□ -0.04
CLIP3-203ENST00000586457 NBPF6Q5VWK0 638 aa14.8□□□□□ -0.04
CLIP3-203ENST00000586457 USHBP1Q8N6Y0 703 aa14.8□□□□□ -0.04
CLIP3-203ENST00000586457 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
CLIP3-203ENST00000586457 NBPF4Q96M43 638 aa14.8□□□□□ -0.04
CLIP3-203ENST00000586457 EZH2Q15910 746 aaKnown RBP14.79□□□□□ -0.04
CLIP3-203ENST00000586457 WASHC2AQ641Q2 1341 aa14.79□□□□□ -0.04
CLIP3-203ENST00000586457 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
CLIP3-203ENST00000586457 FAM208AQ9UK61 1670 aaKnown RBP14.78□□□□□ -0.04
CLIP3-203ENST00000586457 CC2D1BQ5T0F9 858 aaKnown RBP14.78□□□□□ -0.04
CLIP3-203ENST00000586457 DISP2A7MBM2 1401 aa14.77□□□□□ -0.04
CLIP3-203ENST00000586457 TNS2Q63HR2 1409 aa14.77□□□□□ -0.04
CLIP3-203ENST00000586457 SYTL4Q96C24 671 aaPredicted RBP14.77□□□□□ -0.05
CLIP3-203ENST00000586457 ACSBG1Q96GR2 724 aa14.77□□□□□ -0.05
CLIP3-203ENST00000586457 LRRC37A3O60309 1634 aa14.77□□□□□ -0.05
CLIP3-203ENST00000586457 PARD3Q8TEW0 1356 aa14.76□□□□□ -0.05
CLIP3-203ENST00000586457 CAMKK2Q96RR4 588 aa14.75□□□□□ -0.05
CLIP3-203ENST00000586457 SPG7Q9UQ90 795 aa14.75□□□□□ -0.05
CLIP3-203ENST00000586457 MAP2P11137 1827 aaKnown RBP14.74□□□□□ -0.05
CLIP3-203ENST00000586457 WNK3Q9BYP7 1800 aa14.74□□□□□ -0.05
CLIP3-203ENST00000586457 PLSCR1O15162 318 aa14.74□□□□□ -0.05
CLIP3-203ENST00000586457 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
CLIP3-203ENST00000586457 AMER1Q5JTC6 1135 aaPredicted RBP14.73□□□□□ -0.05
CLIP3-203ENST00000586457 PCDH11XQ9BZA7 1347 aa14.72□□□□□ -0.05
CLIP3-203ENST00000586457 PCDH11YQ9BZA8 1340 aa14.72□□□□□ -0.05
CLIP3-203ENST00000586457 PER1O15534 1290 aaPredicted RBP14.72□□□□□ -0.05
CLIP3-203ENST00000586457 KCNQ2O43526 872 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms