RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
LIG3-207ENST00000586119 PROM2Q8N271 834 aa16.67■□□□□ 0.26
LIG3-207ENST00000586119 WDR17Q8IZU2 1322 aa16.67■□□□□ 0.26
LIG3-207ENST00000586119 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
LIG3-207ENST00000586119 PDGFDQ9GZP0 370 aaPredicted RBP16.66■□□□□ 0.26
LIG3-207ENST00000586119 OVOS2A0A0G2JMS6 1433 aa16.65■□□□□ 0.26
LIG3-207ENST00000586119 OVOS2A0A0J9YW53 1432 aa16.65■□□□□ 0.26
LIG3-207ENST00000586119 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
LIG3-207ENST00000586119 OVOS2Q6IE36 1432 aa16.65■□□□□ 0.26
LIG3-207ENST00000586119 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
LIG3-207ENST00000586119 WNK3Q9BYP7 1800 aa16.64■□□□□ 0.25
LIG3-207ENST00000586119 PLSCR1O15162 318 aa16.64■□□□□ 0.25
LIG3-207ENST00000586119 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
LIG3-207ENST00000586119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
LIG3-207ENST00000586119 KCNH5Q8NCM2 988 aa16.63■□□□□ 0.25
LIG3-207ENST00000586119 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
LIG3-207ENST00000586119 BCL11BQ9C0K0 894 aaPredicted RBP16.63■□□□□ 0.25
LIG3-207ENST00000586119 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
LIG3-207ENST00000586119 KCNQ2O43526 872 aa16.62■□□□□ 0.25
LIG3-207ENST00000586119 NME9Q86XW9 330 aa16.62■□□□□ 0.25
LIG3-207ENST00000586119 TTC21AQ8NDW8 1320 aa16.62■□□□□ 0.25
LIG3-207ENST00000586119 NFAT5O94916 1531 aa16.61■□□□□ 0.25
LIG3-207ENST00000586119 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
LIG3-207ENST00000586119 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
LIG3-207ENST00000586119 EXOC5O00471 708 aa16.6■□□□□ 0.25
LIG3-207ENST00000586119 SLC12A5Q9H2X9 1139 aa16.6■□□□□ 0.25
LIG3-207ENST00000586119 C11orf95C9JLR9 678 aaPredicted RBP16.59■□□□□ 0.25
LIG3-207ENST00000586119 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
LIG3-207ENST00000586119 PPP1R1BQ9UD71 204 aaPredicted RBP16.59■□□□□ 0.25
LIG3-207ENST00000586119 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
LIG3-207ENST00000586119 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
LIG3-207ENST00000586119 CDCA7Q9BWT1 371 aaPredicted RBP16.58■□□□□ 0.24
LIG3-207ENST00000586119 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
LIG3-207ENST00000586119 ZBTB7AO95365 584 aa16.57■□□□□ 0.24
LIG3-207ENST00000586119 TXNRD1Q16881 649 aa16.57■□□□□ 0.24
LIG3-207ENST00000586119 ACSBG1Q96GR2 724 aa16.57■□□□□ 0.24
LIG3-207ENST00000586119 SBNO2Q9Y2G9 1366 aa16.56■□□□□ 0.24
LIG3-207ENST00000586119 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
LIG3-207ENST00000586119 RGPD3A6NKT7 1758 aaPredicted RBP16.56■□□□□ 0.24
LIG3-207ENST00000586119 RGPD4Q7Z3J3 1758 aa16.56■□□□□ 0.24
LIG3-207ENST00000586119 CASZ1Q86V15 1759 aa16.56■□□□□ 0.24
LIG3-207ENST00000586119 USP31Q70CQ4 1352 aa16.55■□□□□ 0.24
LIG3-207ENST00000586119 NLRP2Q9NX02 1062 aa16.55■□□□□ 0.24
LIG3-207ENST00000586119 BCL9O00512 1426 aa16.54■□□□□ 0.24
LIG3-207ENST00000586119 LTN1O94822 1766 aa16.54■□□□□ 0.24
LIG3-207ENST00000586119 FBLN1P23142 703 aa16.54■□□□□ 0.24
LIG3-207ENST00000586119 CCDC7Q96M83 1385 aa16.53■□□□□ 0.24
LIG3-207ENST00000586119 YY1P25490 414 aa16.53■□□□□ 0.24
LIG3-207ENST00000586119 ERBB3P21860 1342 aa16.52■□□□□ 0.24
LIG3-207ENST00000586119 PTGER2P43116 358 aa16.52■□□□□ 0.24
LIG3-207ENST00000586119 ANKRD24Q8TF21 1146 aa16.52■□□□□ 0.24
LIG3-207ENST00000586119 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
LIG3-207ENST00000586119 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
LIG3-207ENST00000586119 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
LIG3-207ENST00000586119 IL2RBP14784 551 aa16.5■□□□□ 0.23
LIG3-207ENST00000586119 LTV1Q96GA3 475 aaPredicted RBP16.5■□□□□ 0.23
LIG3-207ENST00000586119 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
LIG3-207ENST00000586119 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
LIG3-207ENST00000586119 A0A1W2PP64 1363 aa16.49■□□□□ 0.23
LIG3-207ENST00000586119 MYOM1P52179 1685 aa16.48■□□□□ 0.23
LIG3-207ENST00000586119 NINLQ9Y2I6 1382 aa16.48■□□□□ 0.23
LIG3-207ENST00000586119 NHSQ6T4R5 1651 aa16.47■□□□□ 0.23
LIG3-207ENST00000586119 ST20-MTHFSA0A0A6YYL1 179 aa16.47■□□□□ 0.23
LIG3-207ENST00000586119 TESK2Q96S53 571 aa16.47■□□□□ 0.23
LIG3-207ENST00000586119 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
LIG3-207ENST00000586119 BTAF1O14981 1849 aa16.47■□□□□ 0.23
LIG3-207ENST00000586119 EDC4Q6P2E9 1401 aaKnown RBP16.46■□□□□ 0.23
LIG3-207ENST00000586119 ABCC6O95255 1503 aa16.46■□□□□ 0.23
LIG3-207ENST00000586119 DDX54Q8TDD1 881 aaKnown RBP16.46■□□□□ 0.23
LIG3-207ENST00000586119 IP6K1Q92551 441 aa16.46■□□□□ 0.23
LIG3-207ENST00000586119 TERF2IPQ9NYB0 399 aa16.46■□□□□ 0.23
LIG3-207ENST00000586119 KCNQ4P56696 695 aa16.45■□□□□ 0.22
LIG3-207ENST00000586119 ZNF827Q17R98 1081 aa16.45■□□□□ 0.22
LIG3-207ENST00000586119 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
LIG3-207ENST00000586119 FHDC1Q9C0D6 1143 aaPredicted RBP16.45■□□□□ 0.22
LIG3-207ENST00000586119 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
LIG3-207ENST00000586119 RGPD2P0DJD1 1756 aa16.45■□□□□ 0.22
LIG3-207ENST00000586119 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
LIG3-207ENST00000586119 SYT17Q9BSW7 474 aa16.43■□□□□ 0.22
LIG3-207ENST00000586119 MAP3K19Q56UN5 1328 aa16.43■□□□□ 0.22
LIG3-207ENST00000586119 PUS7Q96PZ0 661 aaKnown RBP16.42■□□□□ 0.22
LIG3-207ENST00000586119 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
LIG3-207ENST00000586119 PAPPAQ13219 1627 aa16.41■□□□□ 0.22
LIG3-207ENST00000586119 HOXC9P31274 260 aa16.41■□□□□ 0.22
LIG3-207ENST00000586119 COG3Q96JB2 828 aa16.4■□□□□ 0.22
LIG3-207ENST00000586119 AMPHP49418 695 aa16.39■□□□□ 0.21
LIG3-207ENST00000586119 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
LIG3-207ENST00000586119 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
LIG3-207ENST00000586119 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
LIG3-207ENST00000586119 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
LIG3-207ENST00000586119 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
LIG3-207ENST00000586119 ARXQ96QS3 562 aa16.38■□□□□ 0.21
LIG3-207ENST00000586119 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
LIG3-207ENST00000586119 NBPF6Q5VWK0 638 aa16.37■□□□□ 0.21
LIG3-207ENST00000586119 NBPF4Q96M43 638 aa16.37■□□□□ 0.21
LIG3-207ENST00000586119 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
LIG3-207ENST00000586119 FYB1O15117 783 aa16.36■□□□□ 0.21
LIG3-207ENST00000586119 SHANK3Q9BYB0 1731 aa16.36■□□□□ 0.21
LIG3-207ENST00000586119 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
LIG3-207ENST00000586119 PNPLA7Q6ZV29 1317 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms