RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 NBPF20Q3BBV1 942 aa9.03□□□□□ -0.96
ZNF560-202ENST00000585974 TRIM46Q7Z4K8 759 aa9.03□□□□□ -0.96
ZNF560-202ENST00000585974 ADAM32Q8TC27 787 aa9.03□□□□□ -0.96
ZNF560-202ENST00000585974 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
ZNF560-202ENST00000585974 ZIC2O95409 532 aaPredicted RBP9.02□□□□□ -0.97
ZNF560-202ENST00000585974 NR3C2P08235 984 aa9.02□□□□□ -0.97
ZNF560-202ENST00000585974 MRPL14Q6P1L8 145 aaKnown RBP9.02□□□□□ -0.97
ZNF560-202ENST00000585974 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
ZNF560-202ENST00000585974 KCTD15Q96SI1 283 aaPredicted RBP9.02□□□□□ -0.97
ZNF560-202ENST00000585974 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
ZNF560-202ENST00000585974 PRKCSHP14314 528 aaPredicted RBP9.01□□□□□ -0.97
ZNF560-202ENST00000585974 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
ZNF560-202ENST00000585974 OCSTAMPQ9BR26 566 aa9.01□□□□□ -0.97
ZNF560-202ENST00000585974 PRM3Q9NNZ6 103 aa9.01□□□□□ -0.97
ZNF560-202ENST00000585974 UPP2O95045 317 aa9□□□□□ -0.97
ZNF560-202ENST00000585974 SEPT12Q8IYM1 358 aa9□□□□□ -0.97
ZNF560-202ENST00000585974 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
ZNF560-202ENST00000585974 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
ZNF560-202ENST00000585974 ZNF330Q9Y3S2 320 aaPredicted RBP8.99□□□□□ -0.97
ZNF560-202ENST00000585974 NDUFB9Q9Y6M9 179 aa8.99□□□□□ -0.97
ZNF560-202ENST00000585974 BMP1P13497 986 aa8.98□□□□□ -0.97
ZNF560-202ENST00000585974 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
ZNF560-202ENST00000585974 TSEN34Q9BSV6 310 aaKnown RBP8.98□□□□□ -0.97
ZNF560-202ENST00000585974 ZFAND3Q9H8U3 227 aa8.98□□□□□ -0.97
ZNF560-202ENST00000585974 PPP1R26Q5T8A7 1209 aaPredicted RBP8.97□□□□□ -0.97
ZNF560-202ENST00000585974 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
ZNF560-202ENST00000585974 NPAS3Q8IXF0 933 aa8.97□□□□□ -0.97
ZNF560-202ENST00000585974 MEIOBQ8N635 442 aa8.97□□□□□ -0.97
ZNF560-202ENST00000585974 ESPNB1AK53 854 aa8.96□□□□□ -0.98
ZNF560-202ENST00000585974 INTS6LQ5JSJ4 861 aaKnown RBP8.96□□□□□ -0.98
ZNF560-202ENST00000585974 MTMR14Q8NCE2 650 aa8.96□□□□□ -0.98
ZNF560-202ENST00000585974 NR1H3Q13133 447 aa8.95□□□□□ -0.98
ZNF560-202ENST00000585974 Q6ZVU0 165 aa8.95□□□□□ -0.98
ZNF560-202ENST00000585974 FBXO45P0C2W1 286 aa8.94□□□□□ -0.98
ZNF560-202ENST00000585974 LINC00528Q8N1L1 170 aa8.94□□□□□ -0.98
ZNF560-202ENST00000585974 SNRKQ9NRH2 765 aa8.94□□□□□ -0.98
ZNF560-202ENST00000585974 TERTO14746 1132 aaKnown RBP8.93□□□□□ -0.98
ZNF560-202ENST00000585974 RNF20Q5VTR2 975 aa8.93□□□□□ -0.98
ZNF560-202ENST00000585974 PURBQ96QR8 312 aaKnown RBP8.93□□□□□ -0.98
ZNF560-202ENST00000585974 WFS1O76024 890 aa8.92□□□□□ -0.98
ZNF560-202ENST00000585974 BMP2P12643 396 aa8.92□□□□□ -0.98
ZNF560-202ENST00000585974 SLC16A10Q8TF71 515 aa8.92□□□□□ -0.98
ZNF560-202ENST00000585974 NXF1Q9UBU9 619 aaKnown RBP8.92□□□□□ -0.98
ZNF560-202ENST00000585974 PCDHB9Q9Y5E1 797 aa8.91□□□□□ -0.98
ZNF560-202ENST00000585974 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
ZNF560-202ENST00000585974 NFX1Q12986 1120 aaKnown RBP8.89□□□□□ -0.99
ZNF560-202ENST00000585974 C6orf118Q5T5N4 469 aa8.89□□□□□ -0.99
ZNF560-202ENST00000585974 SOS2Q07890 1332 aaPredicted RBP8.88□□□□□ -0.99
ZNF560-202ENST00000585974 ERVH48-1M5A8F1 160 aa8.88□□□□□ -0.99
ZNF560-202ENST00000585974 SPINT1O43278 529 aa8.88□□□□□ -0.99
ZNF560-202ENST00000585974 MAN1A2O60476 641 aa8.88□□□□□ -0.99
ZNF560-202ENST00000585974 GPR37L1O60883 481 aa8.87□□□□□ -0.99
ZNF560-202ENST00000585974 CBLBQ13191 982 aa8.86□□□□□ -0.99
ZNF560-202ENST00000585974 TTLL8A6PVC2 850 aa8.85□□□□□ -0.99
ZNF560-202ENST00000585974 LILRA1O75019 489 aa8.85□□□□□ -0.99
ZNF560-202ENST00000585974 GIGYF1O75420 1035 aaPredicted RBP8.85□□□□□ -0.99
ZNF560-202ENST00000585974 ADH1AP07327 375 aa8.85□□□□□ -0.99
ZNF560-202ENST00000585974 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.99
ZNF560-202ENST00000585974 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.85□□□□□ -0.99
ZNF560-202ENST00000585974 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
ZNF560-202ENST00000585974 WIPF1O43516 503 aa8.84□□□□□ -0.99
ZNF560-202ENST00000585974 WASHC4Q2M389 1173 aa8.84□□□□□ -0.99
ZNF560-202ENST00000585974 IRF7Q92985 503 aa8.84□□□□□ -0.99
ZNF560-202ENST00000585974 TMPRSS4Q9NRS4 437 aa8.84□□□□□ -0.99
ZNF560-202ENST00000585974 RAB15P59190 212 aa8.83□□□□□ -1
ZNF560-202ENST00000585974 TBC1D2BQ9UPU7 963 aa8.83□□□□□ -1
ZNF560-202ENST00000585974 H3BM21 787 aa8.82□□□□□ -1
ZNF560-202ENST00000585974 PTGIRP43119 386 aa8.82□□□□□ -1
ZNF560-202ENST00000585974 SOX11P35716 441 aa8.81□□□□□ -1
ZNF560-202ENST00000585974 ERVK-9P63128 1117 aa8.81□□□□□ -1
ZNF560-202ENST00000585974 MCM6Q14566 821 aa8.81□□□□□ -1
ZNF560-202ENST00000585974 TMEM132AQ24JP5 1023 aa8.81□□□□□ -1
ZNF560-202ENST00000585974 CC2D2BQ6DHV5 1058 aa8.81□□□□□ -1
ZNF560-202ENST00000585974 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
ZNF560-202ENST00000585974 ADD1P35611 737 aaKnown RBP8.8□□□□□ -1
ZNF560-202ENST00000585974 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
ZNF560-202ENST00000585974 RELBQ01201 579 aa8.8□□□□□ -1
ZNF560-202ENST00000585974 FLIIQ13045 1269 aa8.8□□□□□ -1
ZNF560-202ENST00000585974 ESF1Q9H501 851 aaKnown RBP8.8□□□□□ -1
ZNF560-202ENST00000585974 DNMT3LQ9UJW3 386 aa8.8□□□□□ -1
ZNF560-202ENST00000585974 IRF5Q13568 498 aa8.79□□□□□ -1
ZNF560-202ENST00000585974 WWC1Q8IX03 1113 aa8.79□□□□□ -1
ZNF560-202ENST00000585974 AGBL1Q96MI9 1066 aa8.79□□□□□ -1
ZNF560-202ENST00000585974 CYLDQ9NQC7 956 aa8.79□□□□□ -1
ZNF560-202ENST00000585974 VSIG8P0DPA2 414 aa8.78□□□□□ -1
ZNF560-202ENST00000585974 GPC1P35052 558 aa8.78□□□□□ -1
ZNF560-202ENST00000585974 CYP2U1Q7Z449 544 aa8.78□□□□□ -1
ZNF560-202ENST00000585974 GDPD2Q9HCC8 539 aa8.78□□□□□ -1
ZNF560-202ENST00000585974 SOBPA7XYQ1 873 aa8.77□□□□□ -1.01
ZNF560-202ENST00000585974 ATP5J2-PTCD1G3V325 749 aa8.77□□□□□ -1.01
ZNF560-202ENST00000585974 KDF1Q8NAX2 398 aaPredicted RBP8.77□□□□□ -1.01
ZNF560-202ENST00000585974 INSM2Q96T92 566 aaPredicted RBP8.77□□□□□ -1.01
ZNF560-202ENST00000585974 ZNF395Q9H8N7 513 aaPredicted RBP8.77□□□□□ -1.01
ZNF560-202ENST00000585974 POLMQ9NP87 494 aaPredicted RBP8.77□□□□□ -1.01
ZNF560-202ENST00000585974 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
ZNF560-202ENST00000585974 PPFIA3O75145 1194 aa8.76□□□□□ -1.01
ZNF560-202ENST00000585974 RNF144AP50876 292 aaPredicted RBP8.76□□□□□ -1.01
ZNF560-202ENST00000585974 FIGNL2A6NMB9 653 aa8.75□□□□□ -1.01
ZNF560-202ENST00000585974 MYCP01106 439 aaPredicted RBP8.75□□□□□ -1.01
ZNF560-202ENST00000585974 ABL2P42684 1182 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms