RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 EN1Q05925 392 aaPredicted RBP24.1■■□□□ 1.45
MBD3-204ENST00000585967 TOM1L2Q6ZVM7 507 aa24.1■■□□□ 1.45
MBD3-204ENST00000585967 RGPD3A6NKT7 1758 aaPredicted RBP24.1■■□□□ 1.45
MBD3-204ENST00000585967 RGPD4Q7Z3J3 1758 aa24.1■■□□□ 1.45
MBD3-204ENST00000585967 HDGFL2Q7Z4V5 671 aaPredicted RBP24.09■■□□□ 1.45
MBD3-204ENST00000585967 NFAT5O94916 1531 aa24.09■■□□□ 1.45
MBD3-204ENST00000585967 OVOS2A0A0G2JMS6 1433 aa24.09■■□□□ 1.45
MBD3-204ENST00000585967 OVOS2A0A0J9YW53 1432 aa24.09■■□□□ 1.45
MBD3-204ENST00000585967 OVOS2Q6IE36 1432 aa24.09■■□□□ 1.45
MBD3-204ENST00000585967 TRIM37O94972 964 aa24.08■■□□□ 1.45
MBD3-204ENST00000585967 CDCA7Q9BWT1 371 aaPredicted RBP24.08■■□□□ 1.45
MBD3-204ENST00000585967 WDR17Q8IZU2 1322 aa24.08■■□□□ 1.44
MBD3-204ENST00000585967 NINLQ9Y2I6 1382 aa24.06■■□□□ 1.44
MBD3-204ENST00000585967 TMC1Q8TDI8 760 aa24.06■■□□□ 1.44
MBD3-204ENST00000585967 TERF2IPQ9NYB0 399 aa24.06■■□□□ 1.44
MBD3-204ENST00000585967 NUP188Q5SRE5 1749 aa24.06■■□□□ 1.44
MBD3-204ENST00000585967 PEAK1Q9H792 1746 aa24.05■■□□□ 1.44
MBD3-204ENST00000585967 EDC4Q6P2E9 1401 aaKnown RBP24.05■■□□□ 1.44
MBD3-204ENST00000585967 APBA3O96018 575 aa24.05■■□□□ 1.44
MBD3-204ENST00000585967 PUS7Q96PZ0 661 aaKnown RBP24.05■■□□□ 1.44
MBD3-204ENST00000585967 SOX12O15370 315 aa24.04■■□□□ 1.44
MBD3-204ENST00000585967 CSB-PGBD3P0DP91 1061 aa24.04■■□□□ 1.44
MBD3-204ENST00000585967 DDB1Q16531 1140 aa24.04■■□□□ 1.44
MBD3-204ENST00000585967 ARHGEF25Q86VW2 580 aa24.04■■□□□ 1.44
MBD3-204ENST00000585967 USP31Q70CQ4 1352 aa24.03■■□□□ 1.44
MBD3-204ENST00000585967 FAM208AQ9UK61 1670 aaKnown RBP24.02■■□□□ 1.44
MBD3-204ENST00000585967 CD163L1Q9NR16 1453 aa24.01■■□□□ 1.43
MBD3-204ENST00000585967 PSDA5PKW4 1024 aaPredicted RBP24.01■■□□□ 1.43
MBD3-204ENST00000585967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.01■■□□□ 1.43
MBD3-204ENST00000585967 CCDC7Q96M83 1385 aa24.01■■□□□ 1.43
MBD3-204ENST00000585967 EZH2Q15910 746 aaKnown RBP24■■□□□ 1.43
MBD3-204ENST00000585967 CAMKK2Q96RR4 588 aa23.99■■□□□ 1.43
MBD3-204ENST00000585967 CARD10Q9BWT7 1032 aa23.98■■□□□ 1.43
MBD3-204ENST00000585967 A0A1W2PP64 1363 aa23.97■■□□□ 1.43
MBD3-204ENST00000585967 NBPF14Q5TI25 921 aa23.97■■□□□ 1.43
MBD3-204ENST00000585967 AXIN2Q9Y2T1 843 aa23.97■■□□□ 1.43
MBD3-204ENST00000585967 R3HDM1Q15032 1099 aaKnown RBP23.96■■□□□ 1.43
MBD3-204ENST00000585967 KAT6BQ8WYB5 2073 aa23.95■■□□□ 1.42
MBD3-204ENST00000585967 SLC12A5Q9H2X9 1139 aa23.94■■□□□ 1.42
MBD3-204ENST00000585967 NME9Q86XW9 330 aa23.93■■□□□ 1.42
MBD3-204ENST00000585967 BCL9O00512 1426 aa23.93■■□□□ 1.42
MBD3-204ENST00000585967 TNS2Q63HR2 1409 aa23.93■■□□□ 1.42
MBD3-204ENST00000585967 ST20-MTHFSA0A0A6YYL1 179 aa23.92■■□□□ 1.42
MBD3-204ENST00000585967 ERBB3P21860 1342 aa23.91■■□□□ 1.42
MBD3-204ENST00000585967 KIF20BQ96Q89 1820 aa23.9■■□□□ 1.42
MBD3-204ENST00000585967 EXOC5O00471 708 aa23.9■■□□□ 1.42
MBD3-204ENST00000585967 NHSQ6T4R5 1651 aa23.89■■□□□ 1.42
MBD3-204ENST00000585967 USP47Q96K76 1375 aa23.89■■□□□ 1.41
MBD3-204ENST00000585967 TMF1P82094 1093 aa23.88■■□□□ 1.41
MBD3-204ENST00000585967 CDCA8Q53HL2 280 aa23.88■■□□□ 1.41
MBD3-204ENST00000585967 TESK2Q96S53 571 aa23.88■■□□□ 1.41
MBD3-204ENST00000585967 BCL11BQ9C0K0 894 aaPredicted RBP23.88■■□□□ 1.41
MBD3-204ENST00000585967 NLRP2Q9NX02 1062 aa23.87■■□□□ 1.41
MBD3-204ENST00000585967 ANKRD36BQ8N2N9 1353 aa23.87■■□□□ 1.41
MBD3-204ENST00000585967 PLSCR1O15162 318 aa23.86■■□□□ 1.41
MBD3-204ENST00000585967 COG3Q96JB2 828 aa23.86■■□□□ 1.41
MBD3-204ENST00000585967 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
MBD3-204ENST00000585967 CLSPNQ9HAW4 1339 aa23.84■■□□□ 1.41
MBD3-204ENST00000585967 MARCH10Q8NA82 808 aaPredicted RBP23.84■■□□□ 1.41
MBD3-204ENST00000585967 IL2RBP14784 551 aa23.83■■□□□ 1.41
MBD3-204ENST00000585967 ANKRD24Q8TF21 1146 aa23.83■■□□□ 1.41
MBD3-204ENST00000585967 BTAF1O14981 1849 aa23.8■■□□□ 1.4
MBD3-204ENST00000585967 RTL1A6NKG5 1358 aa23.79■■□□□ 1.4
MBD3-204ENST00000585967 IP6K1Q92551 441 aa23.79■■□□□ 1.4
MBD3-204ENST00000585967 RGPD2P0DJD1 1756 aa23.78■■□□□ 1.4
MBD3-204ENST00000585967 SMG6Q86US8 1419 aaKnown RBP23.77■■□□□ 1.4
MBD3-204ENST00000585967 MYOM1P52179 1685 aa23.77■■□□□ 1.4
MBD3-204ENST00000585967 AMPHP49418 695 aa23.77■■□□□ 1.4
MBD3-204ENST00000585967 CASZ1Q86V15 1759 aa23.76■■□□□ 1.39
MBD3-204ENST00000585967 SPON1Q9HCB6 807 aa23.75■■□□□ 1.39
MBD3-204ENST00000585967 PPP1R1BQ9UD71 204 aaPredicted RBP23.74■■□□□ 1.39
MBD3-204ENST00000585967 LTV1Q96GA3 475 aaPredicted RBP23.72■■□□□ 1.39
MBD3-204ENST00000585967 MAP3K19Q56UN5 1328 aa23.72■■□□□ 1.39
MBD3-204ENST00000585967 DOT1LQ8TEK3 1739 aa23.72■■□□□ 1.39
MBD3-204ENST00000585967 HOXC9P31274 260 aa23.71■■□□□ 1.39
MBD3-204ENST00000585967 STK32BQ9NY57 414 aa23.71■■□□□ 1.39
MBD3-204ENST00000585967 KCNQ2O43526 872 aa23.7■■□□□ 1.38
MBD3-204ENST00000585967 TXNRD1Q16881 649 aa23.7■■□□□ 1.38
MBD3-204ENST00000585967 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
MBD3-204ENST00000585967 SHANK3Q9BYB0 1731 aa23.69■■□□□ 1.38
MBD3-204ENST00000585967 KIF24Q5T7B8 1368 aa23.68■■□□□ 1.38
MBD3-204ENST00000585967 DCAF8L1A6NGE4 600 aa23.67■■□□□ 1.38
MBD3-204ENST00000585967 PTF1AQ7RTS3 328 aa23.67■■□□□ 1.38
MBD3-204ENST00000585967 ACSBG1Q96GR2 724 aa23.67■■□□□ 1.38
MBD3-204ENST00000585967 FYB1O15117 783 aa23.66■■□□□ 1.38
MBD3-204ENST00000585967 GGNBP2Q9H3C7 697 aa23.66■■□□□ 1.38
MBD3-204ENST00000585967 QSER1Q2KHR3 1735 aa23.66■■□□□ 1.38
MBD3-204ENST00000585967 ANKRD26Q9UPS8 1709 aa23.66■■□□□ 1.38
MBD3-204ENST00000585967 CGNL1Q0VF96 1302 aa23.65■■□□□ 1.38
MBD3-204ENST00000585967 ANO8Q9HCE9 1232 aaPredicted RBP23.65■■□□□ 1.38
MBD3-204ENST00000585967 MAP2P11137 1827 aaKnown RBP23.65■■□□□ 1.38
MBD3-204ENST00000585967 PAPPAQ13219 1627 aa23.65■■□□□ 1.38
MBD3-204ENST00000585967 FLT4P35916 1363 aa23.65■■□□□ 1.38
MBD3-204ENST00000585967 DDX54Q8TDD1 881 aaKnown RBP23.63■■□□□ 1.37
MBD3-204ENST00000585967 NSD3Q9BZ95 1437 aa23.63■■□□□ 1.37
MBD3-204ENST00000585967 LY75O60449 1722 aa23.62■■□□□ 1.37
MBD3-204ENST00000585967 RRS1Q15050 365 aaKnown RBP23.62■■□□□ 1.37
MBD3-204ENST00000585967 SLC15A2Q16348 729 aa23.62■■□□□ 1.37
MBD3-204ENST00000585967 PROM2Q8N271 834 aa23.62■■□□□ 1.37
MBD3-204ENST00000585967 RAPGEF4Q8WZA2 1011 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms