RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 TTC21AQ8NDW8 1320 aa28.64■■■□□ 2.17
CLPTM1-204ENST00000585961 TRPM1Q7Z4N2 1603 aa28.63■■■□□ 2.17
CLPTM1-204ENST00000585961 BCL11BQ9C0K0 894 aaPredicted RBP28.63■■■□□ 2.17
CLPTM1-204ENST00000585961 EXOC5O00471 708 aa28.62■■■□□ 2.17
CLPTM1-204ENST00000585961 PLSCR1O15162 318 aa28.62■■■□□ 2.17
CLPTM1-204ENST00000585961 OVOS2A0A0G2JMS6 1433 aa28.61■■■□□ 2.17
CLPTM1-204ENST00000585961 OVOS2A0A0J9YW53 1432 aa28.61■■■□□ 2.17
CLPTM1-204ENST00000585961 OVOS2Q6IE36 1432 aa28.61■■■□□ 2.17
CLPTM1-204ENST00000585961 PIK3C2AO00443 1686 aa28.61■■■□□ 2.17
CLPTM1-204ENST00000585961 SLC12A5Q9H2X9 1139 aa28.61■■■□□ 2.17
CLPTM1-204ENST00000585961 CPSF1Q10570 1443 aaKnown RBP28.6■■■□□ 2.17
CLPTM1-204ENST00000585961 NME9Q86XW9 330 aa28.6■■■□□ 2.17
CLPTM1-204ENST00000585961 PROM2Q8N271 834 aa28.59■■■□□ 2.17
CLPTM1-204ENST00000585961 CDCA7Q9BWT1 371 aaPredicted RBP28.59■■■□□ 2.17
CLPTM1-204ENST00000585961 SPON1Q9HCB6 807 aa28.59■■■□□ 2.17
CLPTM1-204ENST00000585961 PPP1R1BQ9UD71 204 aaPredicted RBP28.59■■■□□ 2.17
CLPTM1-204ENST00000585961 COL18A1P39060 1754 aa28.58■■■□□ 2.17
CLPTM1-204ENST00000585961 KCNQ2O43526 872 aa28.58■■■□□ 2.17
CLPTM1-204ENST00000585961 PARP4Q9UKK3 1724 aaKnown RBP28.57■■■□□ 2.16
CLPTM1-204ENST00000585961 ANO8Q9HCE9 1232 aaPredicted RBP28.56■■■□□ 2.16
CLPTM1-204ENST00000585961 PDGFDQ9GZP0 370 aaPredicted RBP28.55■■■□□ 2.16
CLPTM1-204ENST00000585961 NLRP2Q9NX02 1062 aa28.55■■■□□ 2.16
CLPTM1-204ENST00000585961 NUP188Q5SRE5 1749 aa28.53■■■□□ 2.16
CLPTM1-204ENST00000585961 HDGFL2Q7Z4V5 671 aaPredicted RBP28.53■■■□□ 2.16
CLPTM1-204ENST00000585961 ACSBG1Q96GR2 724 aa28.52■■■□□ 2.16
CLPTM1-204ENST00000585961 RREB1Q92766 1687 aa28.51■■■□□ 2.16
CLPTM1-204ENST00000585961 RGPD5Q99666 1765 aa28.51■■■□□ 2.15
CLPTM1-204ENST00000585961 PEAK1Q9H792 1746 aa28.5■■■□□ 2.15
CLPTM1-204ENST00000585961 TXNRD1Q16881 649 aa28.49■■■□□ 2.15
CLPTM1-204ENST00000585961 LRRC37A3O60309 1634 aa28.49■■■□□ 2.15
CLPTM1-204ENST00000585961 ZBTB7AO95365 584 aa28.48■■■□□ 2.15
CLPTM1-204ENST00000585961 SBNO2Q9Y2G9 1366 aa28.48■■■□□ 2.15
CLPTM1-204ENST00000585961 AKAP12Q02952 1782 aa28.47■■■□□ 2.15
CLPTM1-204ENST00000585961 ANKRD24Q8TF21 1146 aa28.47■■■□□ 2.15
CLPTM1-204ENST00000585961 ATF5Q9Y2D1 282 aaPredicted RBP28.47■■■□□ 2.15
CLPTM1-204ENST00000585961 NFAT5O94916 1531 aa28.47■■■□□ 2.15
CLPTM1-204ENST00000585961 USP31Q70CQ4 1352 aa28.47■■■□□ 2.15
CLPTM1-204ENST00000585961 CCDC7Q96M83 1385 aa28.47■■■□□ 2.15
CLPTM1-204ENST00000585961 LTV1Q96GA3 475 aaPredicted RBP28.45■■■□□ 2.14
CLPTM1-204ENST00000585961 TERF2IPQ9NYB0 399 aa28.45■■■□□ 2.14
CLPTM1-204ENST00000585961 TONSLQ96HA7 1378 aa28.44■■■□□ 2.14
CLPTM1-204ENST00000585961 CD163L1Q9NR16 1453 aa28.44■■■□□ 2.14
CLPTM1-204ENST00000585961 SBF2Q86WG5 1849 aa28.43■■■□□ 2.14
CLPTM1-204ENST00000585961 IL2RBP14784 551 aa28.43■■■□□ 2.14
CLPTM1-204ENST00000585961 STK32BQ9NY57 414 aa28.43■■■□□ 2.14
CLPTM1-204ENST00000585961 ERBB3P21860 1342 aa28.43■■■□□ 2.14
CLPTM1-204ENST00000585961 FBLN1P23142 703 aa28.42■■■□□ 2.14
CLPTM1-204ENST00000585961 YY1P25490 414 aa28.41■■■□□ 2.14
CLPTM1-204ENST00000585961 BCL9O00512 1426 aa28.41■■■□□ 2.14
CLPTM1-204ENST00000585961 ST20-MTHFSA0A0A6YYL1 179 aa28.4■■■□□ 2.14
CLPTM1-204ENST00000585961 SLC15A2Q16348 729 aa28.4■■■□□ 2.14
CLPTM1-204ENST00000585961 DCAF8L1A6NGE4 600 aa28.39■■■□□ 2.14
CLPTM1-204ENST00000585961 DDX54Q8TDD1 881 aaKnown RBP28.38■■■□□ 2.13
CLPTM1-204ENST00000585961 A0A1W2PP64 1363 aa28.37■■■□□ 2.13
CLPTM1-204ENST00000585961 IP6K1Q92551 441 aa28.36■■■□□ 2.13
CLPTM1-204ENST00000585961 EDC4Q6P2E9 1401 aaKnown RBP28.35■■■□□ 2.13
CLPTM1-204ENST00000585961 PUS7Q96PZ0 661 aaKnown RBP28.35■■■□□ 2.13
CLPTM1-204ENST00000585961 TESK2Q96S53 571 aa28.35■■■□□ 2.13
CLPTM1-204ENST00000585961 PTGER2P43116 358 aa28.34■■■□□ 2.13
CLPTM1-204ENST00000585961 MON2Q7Z3U7 1717 aa28.34■■■□□ 2.13
CLPTM1-204ENST00000585961 TNS2Q63HR2 1409 aa28.34■■■□□ 2.13
CLPTM1-204ENST00000585961 WNK3Q9BYP7 1800 aa28.32■■■□□ 2.12
CLPTM1-204ENST00000585961 COG3Q96JB2 828 aa28.31■■■□□ 2.12
CLPTM1-204ENST00000585961 NINLQ9Y2I6 1382 aa28.3■■■□□ 2.12
CLPTM1-204ENST00000585961 AMPHP49418 695 aa28.3■■■□□ 2.12
CLPTM1-204ENST00000585961 LRRC4BQ9NT99 713 aa28.28■■■□□ 2.12
CLPTM1-204ENST00000585961 MAP3K19Q56UN5 1328 aa28.27■■■□□ 2.12
CLPTM1-204ENST00000585961 KAT6BQ8WYB5 2073 aa28.27■■■□□ 2.12
CLPTM1-204ENST00000585961 HOXC9P31274 260 aa28.26■■■□□ 2.11
CLPTM1-204ENST00000585961 SYTL4Q96C24 671 aaPredicted RBP28.26■■■□□ 2.11
CLPTM1-204ENST00000585961 ABCC6O95255 1503 aa28.26■■■□□ 2.11
CLPTM1-204ENST00000585961 RGPD3A6NKT7 1758 aaPredicted RBP28.26■■■□□ 2.11
CLPTM1-204ENST00000585961 RGPD4Q7Z3J3 1758 aa28.26■■■□□ 2.11
CLPTM1-204ENST00000585961 KCNQ4P56696 695 aa28.25■■■□□ 2.11
CLPTM1-204ENST00000585961 FHDC1Q9C0D6 1143 aaPredicted RBP28.25■■■□□ 2.11
CLPTM1-204ENST00000585961 MTFR1LQ9H019 292 aa28.25■■■□□ 2.11
CLPTM1-204ENST00000585961 PRIM1P49642 420 aaKnown RBP28.24■■■□□ 2.11
CLPTM1-204ENST00000585961 ZNF827Q17R98 1081 aa28.24■■■□□ 2.11
CLPTM1-204ENST00000585961 RRS1Q15050 365 aaKnown RBP28.23■■■□□ 2.11
CLPTM1-204ENST00000585961 SYT17Q9BSW7 474 aa28.23■■■□□ 2.11
CLPTM1-204ENST00000585961 LTN1O94822 1766 aa28.23■■■□□ 2.11
CLPTM1-204ENST00000585961 CASZ1Q86V15 1759 aa28.22■■■□□ 2.11
CLPTM1-204ENST00000585961 GGNBP2Q9H3C7 697 aa28.22■■■□□ 2.11
CLPTM1-204ENST00000585961 ZCRB1Q8TBF4 217 aaKnown RBP28.2■■■□□ 2.1
CLPTM1-204ENST00000585961 FYB1O15117 783 aa28.19■■■□□ 2.1
CLPTM1-204ENST00000585961 SLC24A1O60721 1099 aa28.19■■■□□ 2.1
CLPTM1-204ENST00000585961 SGIP1Q9BQI5 828 aa28.19■■■□□ 2.1
CLPTM1-204ENST00000585961 USHBP1Q8N6Y0 703 aa28.18■■■□□ 2.1
CLPTM1-204ENST00000585961 ARXQ96QS3 562 aa28.18■■■□□ 2.1
CLPTM1-204ENST00000585961 USP54Q70EL1 1684 aa28.17■■■□□ 2.1
CLPTM1-204ENST00000585961 TMF1P82094 1093 aa28.17■■■□□ 2.1
CLPTM1-204ENST00000585961 NBPF6Q5VWK0 638 aa28.17■■■□□ 2.1
CLPTM1-204ENST00000585961 NBPF4Q96M43 638 aa28.17■■■□□ 2.1
CLPTM1-204ENST00000585961 NHSQ6T4R5 1651 aa28.16■■■□□ 2.1
CLPTM1-204ENST00000585961 AKT1S1Q96B36 256 aa28.15■■■□□ 2.1
CLPTM1-204ENST00000585961 SLC27A3Q5K4L6 730 aa28.13■■■□□ 2.09
CLPTM1-204ENST00000585961 ANKRD36BQ8N2N9 1353 aa28.12■■■□□ 2.09
CLPTM1-204ENST00000585961 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
CLPTM1-204ENST00000585961 TFCP2L1Q9NZI6 479 aa28.12■■■□□ 2.09
CLPTM1-204ENST00000585961 MYOM1P52179 1685 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms