RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 COL14A1Q05707 1796 aaKnown RBP22.86■■□□□ 1.25
HMG20B-215ENST00000585741 SOX12O15370 315 aa22.84■■□□□ 1.25
HMG20B-215ENST00000585741 USP31Q70CQ4 1352 aa22.84■■□□□ 1.25
HMG20B-215ENST00000585741 PARD3Q8TEW0 1356 aa22.84■■□□□ 1.25
HMG20B-215ENST00000585741 MYBBP1AQ9BQG0 1328 aaKnown RBP22.83■■□□□ 1.25
HMG20B-215ENST00000585741 FAM98CQ17RN3 349 aaKnown RBP22.83■■□□□ 1.25
HMG20B-215ENST00000585741 MIER1Q8N108 512 aa22.83■■□□□ 1.25
HMG20B-215ENST00000585741 SPATA31A5Q5VU36 1347 aa22.82■■□□□ 1.24
HMG20B-215ENST00000585741 SPATA31A7Q8IWB4 1347 aa22.82■■□□□ 1.24
HMG20B-215ENST00000585741 KCNH5Q8NCM2 988 aa22.81■■□□□ 1.24
HMG20B-215ENST00000585741 OVOS2A0A0J9YW53 1432 aa22.81■■□□□ 1.24
HMG20B-215ENST00000585741 OVOS2Q6IE36 1432 aa22.81■■□□□ 1.24
HMG20B-215ENST00000585741 SF3B2Q13435 895 aaKnown RBP22.8■■□□□ 1.24
HMG20B-215ENST00000585741 PIK3C2AO00443 1686 aa22.8■■□□□ 1.24
HMG20B-215ENST00000585741 THSD7AQ9UPZ6 1657 aa22.79■■□□□ 1.24
HMG20B-215ENST00000585741 ANKRD26Q9UPS8 1709 aa22.79■■□□□ 1.24
HMG20B-215ENST00000585741 PPP2R1AP30153 589 aa22.78■■□□□ 1.24
HMG20B-215ENST00000585741 ZBTB7CA1YPR0 619 aa22.76■■□□□ 1.23
HMG20B-215ENST00000585741 PPM1GO15355 546 aaPredicted RBP22.76■■□□□ 1.23
HMG20B-215ENST00000585741 FAM182BQ5T319 152 aa22.76■■□□□ 1.23
HMG20B-215ENST00000585741 CFAP53Q96M91 514 aa22.75■■□□□ 1.23
HMG20B-215ENST00000585741 KIAA0232Q92628 1395 aa22.75■■□□□ 1.23
HMG20B-215ENST00000585741 A0A0G2JS52 829 aa22.74■■□□□ 1.23
HMG20B-215ENST00000585741 GCP02774 474 aa22.74■■□□□ 1.23
HMG20B-215ENST00000585741 MYT1Q01538 1121 aa22.74■■□□□ 1.23
HMG20B-215ENST00000585741 PRDM11Q9NQV5 511 aa22.74■■□□□ 1.23
HMG20B-215ENST00000585741 USP19O94966 1318 aa22.74■■□□□ 1.23
HMG20B-215ENST00000585741 AATKQ6ZMQ8 1374 aa22.74■■□□□ 1.23
HMG20B-215ENST00000585741 LRP5O75197 1615 aa22.73■■□□□ 1.23
HMG20B-215ENST00000585741 PHRF1Q9P1Y6 1649 aaKnown RBP22.73■■□□□ 1.23
HMG20B-215ENST00000585741 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
HMG20B-215ENST00000585741 BAG6P46379 1132 aa22.73■■□□□ 1.23
HMG20B-215ENST00000585741 SPATA31A1Q5TZJ5 1347 aa22.73■■□□□ 1.23
HMG20B-215ENST00000585741 AMPHP49418 695 aa22.72■■□□□ 1.23
HMG20B-215ENST00000585741 MTHFSP49914 203 aa22.72■■□□□ 1.23
HMG20B-215ENST00000585741 RRS1Q15050 365 aaKnown RBP22.72■■□□□ 1.23
HMG20B-215ENST00000585741 MRS2Q9HD23 443 aa22.72■■□□□ 1.23
HMG20B-215ENST00000585741 FBLN1P23142 703 aa22.71■■□□□ 1.23
HMG20B-215ENST00000585741 CHRNA2Q15822 529 aa22.71■■□□□ 1.23
HMG20B-215ENST00000585741 USP54Q70EL1 1684 aa22.71■■□□□ 1.23
HMG20B-215ENST00000585741 EN1Q05925 392 aaPredicted RBP22.7■■□□□ 1.22
HMG20B-215ENST00000585741 DISP2A7MBM2 1401 aa22.7■■□□□ 1.22
HMG20B-215ENST00000585741 RGPD1P0DJD0 1748 aa22.7■■□□□ 1.22
HMG20B-215ENST00000585741 PSDA5PKW4 1024 aaPredicted RBP22.69■■□□□ 1.22
HMG20B-215ENST00000585741 ZC3H6P61129 1189 aaKnown RBP22.69■■□□□ 1.22
HMG20B-215ENST00000585741 POLKQ9UBT6 870 aa22.69■■□□□ 1.22
HMG20B-215ENST00000585741 EMILIN1Q9Y6C2 1016 aa22.69■■□□□ 1.22
HMG20B-215ENST00000585741 TNS1Q9HBL0 1735 aaKnown RBP22.68■■□□□ 1.22
HMG20B-215ENST00000585741 SLIT3O75094 1523 aa22.68■■□□□ 1.22
HMG20B-215ENST00000585741 MAP3K19Q56UN5 1328 aa22.67■■□□□ 1.22
HMG20B-215ENST00000585741 CAMTA1Q9Y6Y1 1673 aa22.65■■□□□ 1.22
HMG20B-215ENST00000585741 STRN4Q9NRL3 753 aa22.64■■□□□ 1.21
HMG20B-215ENST00000585741 FLT4P35916 1363 aa22.63■■□□□ 1.21
HMG20B-215ENST00000585741 LMO7Q8WWI1 1683 aa22.63■■□□□ 1.21
HMG20B-215ENST00000585741 ARHGEF25Q86VW2 580 aa22.63■■□□□ 1.21
HMG20B-215ENST00000585741 NUDCQ9Y266 331 aa22.63■■□□□ 1.21
HMG20B-215ENST00000585741 CPDO75976 1380 aa22.63■■□□□ 1.21
HMG20B-215ENST00000585741 KIF24Q5T7B8 1368 aa22.63■■□□□ 1.21
HMG20B-215ENST00000585741 WDR43Q15061 677 aaKnown RBP eCLIP22.62■■□□□ 1.21
HMG20B-215ENST00000585741 EZH2Q15910 746 aaKnown RBP22.62■■□□□ 1.21
HMG20B-215ENST00000585741 BARGINQ6ZT62 677 aa22.62■■□□□ 1.21
HMG20B-215ENST00000585741 CAMKK2Q96RR4 588 aa22.62■■□□□ 1.21
HMG20B-215ENST00000585741 RTL1A6NKG5 1358 aa22.62■■□□□ 1.21
HMG20B-215ENST00000585741 NFAT5O94916 1531 aa22.62■■□□□ 1.21
HMG20B-215ENST00000585741 MAP2P11137 1827 aaKnown RBP22.61■■□□□ 1.21
HMG20B-215ENST00000585741 DIAPH1O60610 1272 aaKnown RBP22.61■■□□□ 1.21
HMG20B-215ENST00000585741 SMG6Q86US8 1419 aaKnown RBP22.6■■□□□ 1.21
HMG20B-215ENST00000585741 HOXC9P31274 260 aa22.6■■□□□ 1.21
HMG20B-215ENST00000585741 LARP1Q6PKG0 1096 aaKnown RBP22.6■■□□□ 1.21
HMG20B-215ENST00000585741 FAM196AQ6ZSG2 479 aa22.6■■□□□ 1.21
HMG20B-215ENST00000585741 IP6K1Q92551 441 aa22.6■■□□□ 1.21
HMG20B-215ENST00000585741 TRIM37O94972 964 aa22.59■■□□□ 1.21
HMG20B-215ENST00000585741 CCDC184Q52MB2 194 aa22.59■■□□□ 1.21
HMG20B-215ENST00000585741 R3HDM1Q15032 1099 aaKnown RBP22.58■■□□□ 1.21
HMG20B-215ENST00000585741 USP35Q9P2H5 1018 aa22.58■■□□□ 1.21
HMG20B-215ENST00000585741 U2SURPO15042 1029 aaKnown RBP22.57■■□□□ 1.2
HMG20B-215ENST00000585741 HSP90AB2PQ58FF8 381 aa22.57■■□□□ 1.2
HMG20B-215ENST00000585741 FAM9BQ8IZU0 186 aa22.57■■□□□ 1.2
HMG20B-215ENST00000585741 LTV1Q96GA3 475 aaPredicted RBP22.57■■□□□ 1.2
HMG20B-215ENST00000585741 INSRP06213 1382 aa22.55■■□□□ 1.2
HMG20B-215ENST00000585741 CSB-PGBD3P0DP91 1061 aa22.55■■□□□ 1.2
HMG20B-215ENST00000585741 EVA1CP58658 441 aa22.55■■□□□ 1.2
HMG20B-215ENST00000585741 LTN1O94822 1766 aa22.55■■□□□ 1.2
HMG20B-215ENST00000585741 TCP11L2Q8N4U5 519 aa22.54■■□□□ 1.2
HMG20B-215ENST00000585741 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
HMG20B-215ENST00000585741 APBA3O96018 575 aa22.53■■□□□ 1.2
HMG20B-215ENST00000585741 U2AF1L5P0DN76 240 aaPredicted RBP22.52■■□□□ 1.2
HMG20B-215ENST00000585741 U2AF1Q01081 240 aaKnown RBP eCLIP22.52■■□□□ 1.2
HMG20B-215ENST00000585741 EIF4A2Q14240 407 aaKnown RBP22.52■■□□□ 1.2
HMG20B-215ENST00000585741 ANKRD24Q8TF21 1146 aa22.52■■□□□ 1.2
HMG20B-215ENST00000585741 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
HMG20B-215ENST00000585741 RREB1Q92766 1687 aa22.51■■□□□ 1.19
HMG20B-215ENST00000585741 PEAK1Q9H792 1746 aa22.51■■□□□ 1.19
HMG20B-215ENST00000585741 PDE3BQ13370 1112 aa22.5■■□□□ 1.19
HMG20B-215ENST00000585741 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
HMG20B-215ENST00000585741 ABCC6O95255 1503 aa22.5■■□□□ 1.19
HMG20B-215ENST00000585741 PARP4Q9UKK3 1724 aaKnown RBP22.49■■□□□ 1.19
HMG20B-215ENST00000585741 IL13P35225 146 aa22.49■■□□□ 1.19
HMG20B-215ENST00000585741 AXIN2Q9Y2T1 843 aa22.49■■□□□ 1.19
HMG20B-215ENST00000585741 NEFMP07197 916 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms