RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-206ENST00000585460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.29■■□□□ 1.325e-7■■□□□ 11.7
PRKAR1A-206ENST00000585460 CDCA7Q9BWT1 371 aaPredicted RBP23.29■■□□□ 1.32
PRKAR1A-206ENST00000585460 PLSCR1O15162 318 aa23.28■■□□□ 1.32
PRKAR1A-206ENST00000585460 CSB-PGBD3P0DP91 1061 aa23.28■■□□□ 1.32
PRKAR1A-206ENST00000585460 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
PRKAR1A-206ENST00000585460 SLC12A5Q9H2X9 1139 aa23.27■■□□□ 1.32
PRKAR1A-206ENST00000585460 PIK3C2AO00443 1686 aa23.27■■□□□ 1.32
PRKAR1A-206ENST00000585460 OVOS2A0A0G2JMS6 1433 aa23.26■■□□□ 1.31
PRKAR1A-206ENST00000585460 OVOS2A0A0J9YW53 1432 aa23.26■■□□□ 1.31
PRKAR1A-206ENST00000585460 OVOS2Q6IE36 1432 aa23.26■■□□□ 1.31
PRKAR1A-206ENST00000585460 TMC1Q8TDI8 760 aa23.26■■□□□ 1.31
PRKAR1A-206ENST00000585460 SBNO2Q9Y2G9 1366 aa23.26■■□□□ 1.31
PRKAR1A-206ENST00000585460 COL18A1P39060 1754 aa23.25■■□□□ 1.31
PRKAR1A-206ENST00000585460 NME9Q86XW9 330 aa23.25■■□□□ 1.31
PRKAR1A-206ENST00000585460 EXOC5O00471 708 aa23.24■■□□□ 1.31
PRKAR1A-206ENST00000585460 USP31Q70CQ4 1352 aa23.24■■□□□ 1.31
PRKAR1A-206ENST00000585460 PROM2Q8N271 834 aa23.23■■□□□ 1.31
PRKAR1A-206ENST00000585460 PARP4Q9UKK3 1724 aaKnown RBP23.22■■□□□ 1.31
PRKAR1A-206ENST00000585460 HDGFL2Q7Z4V5 671 aaPredicted RBP23.21■■□□□ 1.31
PRKAR1A-206ENST00000585460 PUS7Q96PZ0 661 aaKnown RBP23.2■■□□□ 1.3
PRKAR1A-206ENST00000585460 NFAT5O94916 1531 aa23.19■■□□□ 1.3
PRKAR1A-206ENST00000585460 CD163L1Q9NR16 1453 aa23.19■■□□□ 1.3
PRKAR1A-206ENST00000585460 BCL9O00512 1426 aa23.19■■□□□ 1.3
PRKAR1A-206ENST00000585460 TONSLQ96HA7 1378 aa23.18■■□□□ 1.3
PRKAR1A-206ENST00000585460 CCDC7Q96M83 1385 aa23.17■■□□□ 1.3
PRKAR1A-206ENST00000585460 PEAK1Q9H792 1746 aa23.17■■□□□ 1.3
PRKAR1A-206ENST00000585460 KCNQ2O43526 872 aa23.17■■□□□ 1.3
PRKAR1A-206ENST00000585460 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
PRKAR1A-206ENST00000585460 NLRP2Q9NX02 1062 aa23.17■■□□□ 1.3
PRKAR1A-206ENST00000585460 TERF2IPQ9NYB0 399 aa23.17■■□□□ 1.3
PRKAR1A-206ENST00000585460 ANO8Q9HCE9 1232 aaPredicted RBP23.16■■□□□ 1.3
PRKAR1A-206ENST00000585460 TESK2Q96S53 571 aa23.15■■□□□ 1.3
PRKAR1A-206ENST00000585460 AKAP12Q02952 1782 aa23.14■■□□□ 1.3
PRKAR1A-206ENST00000585460 ERBB3P21860 1342 aa23.14■■□□□ 1.3
PRKAR1A-206ENST00000585460 RREB1Q92766 1687 aa23.14■■□□□ 1.29
PRKAR1A-206ENST00000585460 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
PRKAR1A-206ENST00000585460 LRRC37A3O60309 1634 aa23.14■■□□□ 1.29
PRKAR1A-206ENST00000585460 ANKRD24Q8TF21 1146 aa23.13■■□□□ 1.29
PRKAR1A-206ENST00000585460 TXNRD1Q16881 649 aa23.12■■□□□ 1.29
PRKAR1A-206ENST00000585460 NUP188Q5SRE5 1749 aa23.12■■□□□ 1.29
PRKAR1A-206ENST00000585460 PDGFDQ9GZP0 370 aaPredicted RBP23.12■■□□□ 1.29
PRKAR1A-206ENST00000585460 EDC4Q6P2E9 1401 aaKnown RBP23.11■■□□□ 1.29
PRKAR1A-206ENST00000585460 IL2RBP14784 551 aa23.11■■□□□ 1.29
PRKAR1A-206ENST00000585460 A0A1W2PP64 1363 aa23.11■■□□□ 1.29
PRKAR1A-206ENST00000585460 PPP1R1BQ9UD71 204 aaPredicted RBP23.1■■□□□ 1.29
PRKAR1A-206ENST00000585460 IP6K1Q92551 441 aa23.09■■□□□ 1.29
PRKAR1A-206ENST00000585460 ACSBG1Q96GR2 724 aa23.09■■□□□ 1.29
PRKAR1A-206ENST00000585460 ABCC6O95255 1503 aa23.08■■□□□ 1.28
PRKAR1A-206ENST00000585460 RGPD5Q99666 1765 aa23.07■■□□□ 1.28
PRKAR1A-206ENST00000585460 MON2Q7Z3U7 1717 aa23.06■■□□□ 1.28
PRKAR1A-206ENST00000585460 SLC24A1O60721 1099 aa23.06■■□□□ 1.28
PRKAR1A-206ENST00000585460 FBLN1P23142 703 aa23.06■■□□□ 1.28
PRKAR1A-206ENST00000585460 TNS2Q63HR2 1409 aa23.06■■□□□ 1.28
PRKAR1A-206ENST00000585460 ZBTB7AO95365 584 aa23.05■■□□□ 1.28
PRKAR1A-206ENST00000585460 SLC15A2Q16348 729 aa23.05■■□□□ 1.28
PRKAR1A-206ENST00000585460 STK32BQ9NY57 414 aa23.05■■□□□ 1.28
PRKAR1A-206ENST00000585460 SBF2Q86WG5 1849 aa23.04■■□□□ 1.28
PRKAR1A-206ENST00000585460 LTV1Q96GA3 475 aaPredicted RBP23.04■■□□□ 1.28
PRKAR1A-206ENST00000585460 COG3Q96JB2 828 aa23.03■■□□□ 1.28
PRKAR1A-206ENST00000585460 ATF5Q9Y2D1 282 aaPredicted RBP23.02■■□□□ 1.28
PRKAR1A-206ENST00000585460 PTGER2P43116 358 aa23.01■■□□□ 1.27
PRKAR1A-206ENST00000585460 MAP3K19Q56UN5 1328 aa23.01■■□□□ 1.27
PRKAR1A-206ENST00000585460 NINLQ9Y2I6 1382 aa23.01■■□□□ 1.27
PRKAR1A-206ENST00000585460 DDX54Q8TDD1 881 aaKnown RBP23■■□□□ 1.27
PRKAR1A-206ENST00000585460 HOXC9P31274 260 aa22.99■■□□□ 1.27
PRKAR1A-206ENST00000585460 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
PRKAR1A-206ENST00000585460 USP54Q70EL1 1684 aa22.99■■□□□ 1.27
PRKAR1A-206ENST00000585460 RGPD3A6NKT7 1758 aaPredicted RBP22.99■■□□□ 1.27
PRKAR1A-206ENST00000585460 RGPD4Q7Z3J3 1758 aa22.99■■□□□ 1.27
PRKAR1A-206ENST00000585460 AMPHP49418 695 aa22.98■■□□□ 1.27
PRKAR1A-206ENST00000585460 WNK3Q9BYP7 1800 aa22.98■■□□□ 1.27
PRKAR1A-206ENST00000585460 FYB1O15117 783 aa22.97■■□□□ 1.27
PRKAR1A-206ENST00000585460 YY1P25490 414 aa22.96■■□□□ 1.27
PRKAR1A-206ENST00000585460 LRRC4BQ9NT99 713 aa22.96■■□□□ 1.27
PRKAR1A-206ENST00000585460 TMF1P82094 1093 aa22.95■■□□□ 1.26
PRKAR1A-206ENST00000585460 ANKRD36BQ8N2N9 1353 aa22.94■■□□□ 1.26
PRKAR1A-206ENST00000585460 DCAF8L1A6NGE4 600 aa22.94■■□□□ 1.26
PRKAR1A-206ENST00000585460 MTFR1LQ9H019 292 aa22.94■■□□□ 1.26
PRKAR1A-206ENST00000585460 GGNBP2Q9H3C7 697 aa22.94■■□□□ 1.26
PRKAR1A-206ENST00000585460 RRS1Q15050 365 aaKnown RBP22.93■■□□□ 1.26
PRKAR1A-206ENST00000585460 SGIP1Q9BQI5 828 aa22.93■■□□□ 1.26
PRKAR1A-206ENST00000585460 PRIM1P49642 420 aaKnown RBP22.92■■□□□ 1.26
PRKAR1A-206ENST00000585460 ZNF827Q17R98 1081 aa22.91■■□□□ 1.26
PRKAR1A-206ENST00000585460 NBPF6Q5VWK0 638 aa22.91■■□□□ 1.26
PRKAR1A-206ENST00000585460 ZCRB1Q8TBF4 217 aaKnown RBP22.91■■□□□ 1.26
PRKAR1A-206ENST00000585460 NBPF4Q96M43 638 aa22.91■■□□□ 1.26
PRKAR1A-206ENST00000585460 USP47Q96K76 1375 aa22.9■■□□□ 1.26
PRKAR1A-206ENST00000585460 CASZ1Q86V15 1759 aa22.9■■□□□ 1.26
PRKAR1A-206ENST00000585460 LTN1O94822 1766 aa22.89■■□□□ 1.26
PRKAR1A-206ENST00000585460 AKT1S1Q96B36 256 aa22.89■■□□□ 1.25
PRKAR1A-206ENST00000585460 SYT17Q9BSW7 474 aa22.89■■□□□ 1.25
PRKAR1A-206ENST00000585460 FHDC1Q9C0D6 1143 aaPredicted RBP22.89■■□□□ 1.25
PRKAR1A-206ENST00000585460 SLC27A3Q5K4L6 730 aa22.88■■□□□ 1.25
PRKAR1A-206ENST00000585460 SYTL4Q96C24 671 aaPredicted RBP22.88■■□□□ 1.25
PRKAR1A-206ENST00000585460 NHSQ6T4R5 1651 aa22.87■■□□□ 1.25
PRKAR1A-206ENST00000585460 KCNQ4P56696 695 aa22.87■■□□□ 1.25
PRKAR1A-206ENST00000585460 CARD14Q9BXL6 1004 aa22.87■■□□□ 1.25
PRKAR1A-206ENST00000585460 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
PRKAR1A-206ENST00000585460 HSP90AB2PQ58FF8 381 aa22.85■■□□□ 1.25
PRKAR1A-206ENST00000585460 USHBP1Q8N6Y0 703 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms