RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 WASF2Q9Y6W5 498 aa9.21□□□□□ -0.94
CRLF3-206ENST00000585268 ARID5BQ14865 1188 aa9.2□□□□□ -0.94
CRLF3-206ENST00000585268 CRIPAKQ8N1N5 446 aa9.2□□□□□ -0.94
CRLF3-206ENST00000585268 ZBBXA8MT70 800 aa9.19□□□□□ -0.94
CRLF3-206ENST00000585268 FBXO45P0C2W1 286 aa9.19□□□□□ -0.94
CRLF3-206ENST00000585268 GRM5P41594 1212 aa9.19□□□□□ -0.94
CRLF3-206ENST00000585268 ST8SIA5O15466 376 aa9.18□□□□□ -0.94
CRLF3-206ENST00000585268 NNTQ13423 1086 aa9.18□□□□□ -0.94
CRLF3-206ENST00000585268 CTC1Q2NKJ3 1217 aa9.18□□□□□ -0.94
CRLF3-206ENST00000585268 SLC10A4Q96EP9 437 aa9.18□□□□□ -0.94
CRLF3-206ENST00000585268 AAASQ9NRG9 546 aa9.18□□□□□ -0.94
CRLF3-206ENST00000585268 FSHRP23945 695 aa9.17□□□□□ -0.94
CRLF3-206ENST00000585268 SMCPP49901 116 aaPredicted RBP9.17□□□□□ -0.94
CRLF3-206ENST00000585268 VASH1Q7L8A9 365 aaPredicted RBP9.17□□□□□ -0.94
CRLF3-206ENST00000585268 NR3C2P08235 984 aa9.16□□□□□ -0.94
CRLF3-206ENST00000585268 NR5A1Q13285 461 aa9.16□□□□□ -0.94
CRLF3-206ENST00000585268 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
CRLF3-206ENST00000585268 FLIIQ13045 1269 aa9.15□□□□□ -0.94
CRLF3-206ENST00000585268 NR1H3Q13133 447 aa9.15□□□□□ -0.94
CRLF3-206ENST00000585268 IRF5Q13568 498 aa9.15□□□□□ -0.94
CRLF3-206ENST00000585268 PRM3Q9NNZ6 103 aa9.15□□□□□ -0.94
CRLF3-206ENST00000585268 CDV3Q9UKY7 258 aaKnown RBP9.15□□□□□ -0.94
CRLF3-206ENST00000585268 AXIN1O15169 862 aa9.14□□□□□ -0.95
CRLF3-206ENST00000585268 KLF16Q9BXK1 252 aaPredicted RBP9.14□□□□□ -0.95
CRLF3-206ENST00000585268 COG6Q9Y2V7 657 aa9.14□□□□□ -0.95
CRLF3-206ENST00000585268 NESP48681 1621 aa9.13□□□□□ -0.95
CRLF3-206ENST00000585268 ZNF787Q6DD87 383 aa9.13□□□□□ -0.95
CRLF3-206ENST00000585268 KCTD15Q96SI1 283 aaPredicted RBP9.13□□□□□ -0.95
CRLF3-206ENST00000585268 TOP2AP11388 1531 aaKnown RBP9.13□□□□□ -0.95
CRLF3-206ENST00000585268 TIMP2P16035 220 aa9.12□□□□□ -0.95
CRLF3-206ENST00000585268 ABL2P42684 1182 aa9.12□□□□□ -0.95
CRLF3-206ENST00000585268 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
CRLF3-206ENST00000585268 DZIP3Q86Y13 1208 aaKnown RBP9.12□□□□□ -0.95
CRLF3-206ENST00000585268 POM121Q96HA1 1249 aa9.12□□□□□ -0.95
CRLF3-206ENST00000585268 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
CRLF3-206ENST00000585268 WDR4P57081 412 aaKnown RBP9.11□□□□□ -0.95
CRLF3-206ENST00000585268 INTS6LQ5JSJ4 861 aaKnown RBP9.11□□□□□ -0.95
CRLF3-206ENST00000585268 CCDC116Q8IYX3 515 aa9.11□□□□□ -0.95
CRLF3-206ENST00000585268 PCDHB9Q9Y5E1 797 aa9.11□□□□□ -0.95
CRLF3-206ENST00000585268 SUPT5HO00267 1087 aaKnown RBP9.1□□□□□ -0.95
CRLF3-206ENST00000585268 CAPN5O15484 640 aaPredicted RBP9.1□□□□□ -0.95
CRLF3-206ENST00000585268 ITPKCQ96DU7 683 aa9.1□□□□□ -0.95
CRLF3-206ENST00000585268 ESPNB1AK53 854 aa9.09□□□□□ -0.95
CRLF3-206ENST00000585268 UBTFP17480 764 aaKnown RBP9.09□□□□□ -0.95
CRLF3-206ENST00000585268 ZFAND3Q9H8U3 227 aa9.09□□□□□ -0.95
CRLF3-206ENST00000585268 ZIC2O95409 532 aaPredicted RBP9.08□□□□□ -0.96
CRLF3-206ENST00000585268 ZNF330Q9Y3S2 320 aaPredicted RBP9.08□□□□□ -0.96
CRLF3-206ENST00000585268 POTECB2RU33 542 aa9.07□□□□□ -0.96
CRLF3-206ENST00000585268 VAC14Q08AM6 782 aa9.07□□□□□ -0.96
CRLF3-206ENST00000585268 PPP1R26Q5T8A7 1209 aaPredicted RBP9.07□□□□□ -0.96
CRLF3-206ENST00000585268 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
CRLF3-206ENST00000585268 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
CRLF3-206ENST00000585268 CADPSQ9ULU8 1353 aa9.07□□□□□ -0.96
CRLF3-206ENST00000585268 GIGYF1O75420 1035 aaPredicted RBP9.06□□□□□ -0.96
CRLF3-206ENST00000585268 BMP1P13497 986 aa9.06□□□□□ -0.96
CRLF3-206ENST00000585268 CCDC88BA6NC98 1476 aa9.06□□□□□ -0.96
CRLF3-206ENST00000585268 ERCC6Q03468 1493 aa9.05□□□□□ -0.96
CRLF3-206ENST00000585268 RAB15P59190 212 aa9.05□□□□□ -0.96
CRLF3-206ENST00000585268 MCCD1P59942 119 aaPredicted RBP9.05□□□□□ -0.96
CRLF3-206ENST00000585268 DHX9Q08211 1270 aaKnown RBP9.05□□□□□ -0.96
CRLF3-206ENST00000585268 TRIM46Q7Z4K8 759 aa9.05□□□□□ -0.96
CRLF3-206ENST00000585268 SEPT12Q8IYM1 358 aa9.05□□□□□ -0.96
CRLF3-206ENST00000585268 ZNF592Q92610 1267 aa9.05□□□□□ -0.96
CRLF3-206ENST00000585268 ERVH48-1M5A8F1 160 aa9.04□□□□□ -0.96
CRLF3-206ENST00000585268 RAD21O60216 631 aa9.04□□□□□ -0.96
CRLF3-206ENST00000585268 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
CRLF3-206ENST00000585268 GMPR2Q9P2T1 348 aaKnown RBP9.04□□□□□ -0.96
CRLF3-206ENST00000585268 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
CRLF3-206ENST00000585268 EIF4G2P78344 907 aaKnown RBP eCLIP9.03□□□□□ -0.96
CRLF3-206ENST00000585268 MEIOBQ8N635 442 aa9.03□□□□□ -0.96
CRLF3-206ENST00000585268 TMPRSS4Q9NRS4 437 aa9.03□□□□□ -0.96
CRLF3-206ENST00000585268 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
CRLF3-206ENST00000585268 ZNF784Q8NCA9 323 aaPredicted RBP9.02□□□□□ -0.97
CRLF3-206ENST00000585268 CLUAP1Q96AJ1 413 aa9.02□□□□□ -0.97
CRLF3-206ENST00000585268 CFTRP13569 1480 aa9.02□□□□□ -0.97
CRLF3-206ENST00000585268 MRPL14Q6P1L8 145 aaKnown RBP9.01□□□□□ -0.97
CRLF3-206ENST00000585268 PDS5BQ9NTI5 1447 aa9.01□□□□□ -0.97
CRLF3-206ENST00000585268 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
CRLF3-206ENST00000585268 CBLBQ13191 982 aa9□□□□□ -0.97
CRLF3-206ENST00000585268 Q6ZVU0 165 aa9□□□□□ -0.97
CRLF3-206ENST00000585268 LILRA1O75019 489 aa8.99□□□□□ -0.97
CRLF3-206ENST00000585268 RNF20Q5VTR2 975 aa8.99□□□□□ -0.97
CRLF3-206ENST00000585268 WWC1Q8IX03 1113 aa8.99□□□□□ -0.97
CRLF3-206ENST00000585268 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
CRLF3-206ENST00000585268 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
CRLF3-206ENST00000585268 SOX11P35716 441 aa8.98□□□□□ -0.97
CRLF3-206ENST00000585268 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
CRLF3-206ENST00000585268 FNBP4Q8N3X1 1017 aaPredicted RBP8.98□□□□□ -0.97
CRLF3-206ENST00000585268 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
CRLF3-206ENST00000585268 PURBQ96QR8 312 aaKnown RBP8.98□□□□□ -0.97
CRLF3-206ENST00000585268 SENP2Q9HC62 589 aa8.98□□□□□ -0.97
CRLF3-206ENST00000585268 POM121CA8CG34 1229 aa8.97□□□□□ -0.97
CRLF3-206ENST00000585268 PROSER2Q86WR7 435 aaPredicted RBP8.97□□□□□ -0.97
CRLF3-206ENST00000585268 CCDC125Q86Z20 511 aa8.97□□□□□ -0.97
CRLF3-206ENST00000585268 CYLDQ9NQC7 956 aa8.97□□□□□ -0.97
CRLF3-206ENST00000585268 FANCD2Q9BXW9 1451 aa8.96□□□□□ -0.97
CRLF3-206ENST00000585268 C11orf95C9JLR9 678 aaPredicted RBP8.96□□□□□ -0.98
CRLF3-206ENST00000585268 ADD1P35611 737 aaKnown RBP8.96□□□□□ -0.98
CRLF3-206ENST00000585268 SEMA3FQ13275 785 aa8.96□□□□□ -0.98
CRLF3-206ENST00000585268 SCARF1Q14162 830 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms