RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 PHRF1Q9P1Y6 1649 aaKnown RBP18.92■□□□□ 0.62
TRAF4-215ENST00000584944 BAG6P46379 1132 aa18.91■□□□□ 0.62
TRAF4-215ENST00000584944 CNGB1Q14028 1251 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-215ENST00000584944 SPATA31A1Q5TZJ5 1347 aa18.91■□□□□ 0.62
TRAF4-215ENST00000584944 THSD7AQ9UPZ6 1657 aa18.91■□□□□ 0.62
TRAF4-215ENST00000584944 PIK3C2AO00443 1686 aa18.9■□□□□ 0.62
TRAF4-215ENST00000584944 FYB1O15117 783 aa18.9■□□□□ 0.62
TRAF4-215ENST00000584944 FAM182BQ5T319 152 aa18.9■□□□□ 0.62
TRAF4-215ENST00000584944 USP19O94966 1318 aa18.9■□□□□ 0.62
TRAF4-215ENST00000584944 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
TRAF4-215ENST00000584944 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
TRAF4-215ENST00000584944 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
TRAF4-215ENST00000584944 NSD2O96028 1365 aa18.87■□□□□ 0.61
TRAF4-215ENST00000584944 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
TRAF4-215ENST00000584944 TNNT2P45379 298 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-215ENST00000584944 EN1Q05925 392 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-215ENST00000584944 RGPD1P0DJD0 1748 aa18.86■□□□□ 0.61
TRAF4-215ENST00000584944 EVA1CP58658 441 aa18.85■□□□□ 0.61
TRAF4-215ENST00000584944 CC2D1BQ5T0F9 858 aaKnown RBP18.85■□□□□ 0.61
TRAF4-215ENST00000584944 CPDO75976 1380 aa18.84■□□□□ 0.61
TRAF4-215ENST00000584944 KIF20BQ96Q89 1820 aa18.84■□□□□ 0.61
TRAF4-215ENST00000584944 AMPHP49418 695 aa18.84■□□□□ 0.61
TRAF4-215ENST00000584944 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.61
TRAF4-215ENST00000584944 DISP2A7MBM2 1401 aa18.83■□□□□ 0.61
TRAF4-215ENST00000584944 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.61
TRAF4-215ENST00000584944 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.61
TRAF4-215ENST00000584944 PPM1GO15355 546 aaPredicted RBP18.83■□□□□ 0.6
TRAF4-215ENST00000584944 BARGINQ6ZT62 677 aa18.83■□□□□ 0.6
TRAF4-215ENST00000584944 FAM196AQ6ZSG2 479 aa18.82■□□□□ 0.6
TRAF4-215ENST00000584944 SLIT3O75094 1523 aa18.82■□□□□ 0.6
TRAF4-215ENST00000584944 LMO7Q8WWI1 1683 aa18.82■□□□□ 0.6
TRAF4-215ENST00000584944 TNS1Q9HBL0 1735 aaKnown RBP18.81■□□□□ 0.6
TRAF4-215ENST00000584944 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
TRAF4-215ENST00000584944 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
TRAF4-215ENST00000584944 USP35Q9P2H5 1018 aa18.81■□□□□ 0.6
TRAF4-215ENST00000584944 CSB-PGBD3P0DP91 1061 aa18.8■□□□□ 0.6
TRAF4-215ENST00000584944 LRP5O75197 1615 aa18.8■□□□□ 0.6
TRAF4-215ENST00000584944 TRIM37O94972 964 aa18.79■□□□□ 0.6
TRAF4-215ENST00000584944 AMER1Q5JTC6 1135 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-215ENST00000584944 ARHGEF25Q86VW2 580 aa18.79■□□□□ 0.6
TRAF4-215ENST00000584944 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-215ENST00000584944 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
TRAF4-215ENST00000584944 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
TRAF4-215ENST00000584944 TCP11L2Q8N4U5 519 aa18.78■□□□□ 0.6
TRAF4-215ENST00000584944 CAMKK2Q96RR4 588 aa18.78■□□□□ 0.6
TRAF4-215ENST00000584944 AATKQ6ZMQ8 1374 aa18.78■□□□□ 0.6
TRAF4-215ENST00000584944 PDE3BQ13370 1112 aa18.77■□□□□ 0.6
TRAF4-215ENST00000584944 THRAP3Q9Y2W1 955 aaKnown RBP18.77■□□□□ 0.6
TRAF4-215ENST00000584944 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
TRAF4-215ENST00000584944 MAP3K19Q56UN5 1328 aa18.75■□□□□ 0.59
TRAF4-215ENST00000584944 NFAT5O94916 1531 aa18.75■□□□□ 0.59
TRAF4-215ENST00000584944 NPC1L1Q9UHC9 1359 aa18.75■□□□□ 0.59
TRAF4-215ENST00000584944 COL5A2P05997 1499 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-215ENST00000584944 APBA3O96018 575 aa18.74■□□□□ 0.59
TRAF4-215ENST00000584944 FBLN1P23142 703 aa18.74■□□□□ 0.59
TRAF4-215ENST00000584944 R3HDM1Q15032 1099 aaKnown RBP18.74■□□□□ 0.59
TRAF4-215ENST00000584944 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
TRAF4-215ENST00000584944 TOM1L2Q6ZVM7 507 aa18.73■□□□□ 0.59
TRAF4-215ENST00000584944 IP6K1Q92551 441 aa18.73■□□□□ 0.59
TRAF4-215ENST00000584944 LTV1Q96GA3 475 aaPredicted RBP18.73■□□□□ 0.59
TRAF4-215ENST00000584944 ANKRD26Q9UPS8 1709 aa18.72■□□□□ 0.59
TRAF4-215ENST00000584944 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
TRAF4-215ENST00000584944 PARD3Q8TEW0 1356 aa18.72■□□□□ 0.59
TRAF4-215ENST00000584944 FLT4P35916 1363 aa18.71■□□□□ 0.59
TRAF4-215ENST00000584944 HOXC9P31274 260 aa18.71■□□□□ 0.59
TRAF4-215ENST00000584944 NLRP2Q9NX02 1062 aa18.71■□□□□ 0.59
TRAF4-215ENST00000584944 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
TRAF4-215ENST00000584944 CRB1P82279 1406 aa18.71■□□□□ 0.59
TRAF4-215ENST00000584944 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
TRAF4-215ENST00000584944 ANKRD24Q8TF21 1146 aa18.7■□□□□ 0.58
TRAF4-215ENST00000584944 PARP4Q9UKK3 1724 aaKnown RBP18.7■□□□□ 0.58
TRAF4-215ENST00000584944 LTN1O94822 1766 aa18.7■□□□□ 0.58
TRAF4-215ENST00000584944 ABCC6O95255 1503 aa18.69■□□□□ 0.58
TRAF4-215ENST00000584944 CFAP53Q96M91 514 aa18.69■□□□□ 0.58
TRAF4-215ENST00000584944 POLKQ9UBT6 870 aa18.69■□□□□ 0.58
TRAF4-215ENST00000584944 AXIN2Q9Y2T1 843 aa18.69■□□□□ 0.58
TRAF4-215ENST00000584944 COL18A1P39060 1754 aa18.68■□□□□ 0.58
TRAF4-215ENST00000584944 RALBP1Q15311 655 aa18.68■□□□□ 0.58
TRAF4-215ENST00000584944 RREB1Q92766 1687 aa18.67■□□□□ 0.58
TRAF4-215ENST00000584944 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
TRAF4-215ENST00000584944 MTHFSP49914 203 aa18.66■□□□□ 0.58
TRAF4-215ENST00000584944 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
TRAF4-215ENST00000584944 ERBB3P21860 1342 aa18.66■□□□□ 0.58
TRAF4-215ENST00000584944 ANP32CO43423 234 aa18.65■□□□□ 0.58
TRAF4-215ENST00000584944 INSRP06213 1382 aa18.65■□□□□ 0.58
TRAF4-215ENST00000584944 PEAK1Q9H792 1746 aa18.64■□□□□ 0.57
TRAF4-215ENST00000584944 NUP188Q5SRE5 1749 aa18.63■□□□□ 0.57
TRAF4-215ENST00000584944 OVOS2A0A0G2JMS6 1433 aa18.63■□□□□ 0.57
TRAF4-215ENST00000584944 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
TRAF4-215ENST00000584944 DDB1Q16531 1140 aa18.62■□□□□ 0.57
TRAF4-215ENST00000584944 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
TRAF4-215ENST00000584944 CARD10Q9BWT7 1032 aa18.62■□□□□ 0.57
TRAF4-215ENST00000584944 LRRC37A3O60309 1634 aa18.62■□□□□ 0.57
TRAF4-215ENST00000584944 MAP2P11137 1827 aaKnown RBP18.61■□□□□ 0.57
TRAF4-215ENST00000584944 SBF2Q86WG5 1849 aa18.61■□□□□ 0.57
TRAF4-215ENST00000584944 RGPD5Q99666 1765 aa18.6■□□□□ 0.57
TRAF4-215ENST00000584944 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
TRAF4-215ENST00000584944 PLSCR1O15162 318 aa18.59■□□□□ 0.57
TRAF4-215ENST00000584944 DIAPH1O60610 1272 aaKnown RBP18.59■□□□□ 0.57
TRAF4-215ENST00000584944 NUDCQ9Y266 331 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms