RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 WDR17Q8IZU2 1322 aa28.91■■■□□ 2.22
TOP3A-219ENST00000584887 R3HDM1Q15032 1099 aaKnown RBP28.9■■■□□ 2.22
TOP3A-219ENST00000584887 HDGFL2Q7Z4V5 671 aaPredicted RBP28.9■■■□□ 2.22
TOP3A-219ENST00000584887 CAMKK2Q96RR4 588 aa28.89■■■□□ 2.22
TOP3A-219ENST00000584887 NME9Q86XW9 330 aa28.88■■■□□ 2.21
TOP3A-219ENST00000584887 SLC12A5Q9H2X9 1139 aa28.88■■■□□ 2.21
TOP3A-219ENST00000584887 NFAT5O94916 1531 aa28.88■■■□□ 2.21
TOP3A-219ENST00000584887 DDB1Q16531 1140 aa28.87■■■□□ 2.21
TOP3A-219ENST00000584887 CD163L1Q9NR16 1453 aa28.86■■■□□ 2.21
TOP3A-219ENST00000584887 RGPD5Q99666 1765 aa28.85■■■□□ 2.21
TOP3A-219ENST00000584887 OVOS2A0A0G2JMS6 1433 aa28.85■■■□□ 2.21
TOP3A-219ENST00000584887 OVOS2A0A0J9YW53 1432 aa28.85■■■□□ 2.21
TOP3A-219ENST00000584887 OVOS2Q6IE36 1432 aa28.85■■■□□ 2.21
TOP3A-219ENST00000584887 LRRC37A3O60309 1634 aa28.84■■■□□ 2.21
TOP3A-219ENST00000584887 TERF2IPQ9NYB0 399 aa28.84■■■□□ 2.21
TOP3A-219ENST00000584887 PARD3Q8TEW0 1356 aa28.84■■■□□ 2.21
TOP3A-219ENST00000584887 LRP5O75197 1615 aa28.83■■■□□ 2.21
TOP3A-219ENST00000584887 USP31Q70CQ4 1352 aa28.82■■■□□ 2.2
TOP3A-219ENST00000584887 ST20-MTHFSA0A0A6YYL1 179 aa28.81■■■□□ 2.2
TOP3A-219ENST00000584887 C11orf95C9JLR9 678 aaPredicted RBP28.81■■■□□ 2.2
TOP3A-219ENST00000584887 CARD10Q9BWT7 1032 aa28.81■■■□□ 2.2
TOP3A-219ENST00000584887 EDC4Q6P2E9 1401 aaKnown RBP28.8■■■□□ 2.2
TOP3A-219ENST00000584887 A0A1W2PP64 1363 aa28.8■■■□□ 2.2
TOP3A-219ENST00000584887 CDCA7Q9BWT1 371 aaPredicted RBP28.8■■■□□ 2.2
TOP3A-219ENST00000584887 WNK3Q9BYP7 1800 aa28.8■■■□□ 2.2
TOP3A-219ENST00000584887 TESK2Q96S53 571 aa28.77■■■□□ 2.2
TOP3A-219ENST00000584887 PEAK1Q9H792 1746 aa28.77■■■□□ 2.2
TOP3A-219ENST00000584887 ABCC6O95255 1503 aa28.76■■■□□ 2.19
TOP3A-219ENST00000584887 PUS7Q96PZ0 661 aaKnown RBP28.76■■■□□ 2.19
TOP3A-219ENST00000584887 RREB1Q92766 1687 aa28.76■■■□□ 2.19
TOP3A-219ENST00000584887 USP54Q70EL1 1684 aa28.75■■■□□ 2.19
TOP3A-219ENST00000584887 MARCH10Q8NA82 808 aaPredicted RBP28.75■■■□□ 2.19
TOP3A-219ENST00000584887 CCDC7Q96M83 1385 aa28.75■■■□□ 2.19
TOP3A-219ENST00000584887 NBPF14Q5TI25 921 aa28.74■■■□□ 2.19
TOP3A-219ENST00000584887 NLRP2Q9NX02 1062 aa28.74■■■□□ 2.19
TOP3A-219ENST00000584887 NUP188Q5SRE5 1749 aa28.74■■■□□ 2.19
TOP3A-219ENST00000584887 LTN1O94822 1766 aa28.73■■■□□ 2.19
TOP3A-219ENST00000584887 NINLQ9Y2I6 1382 aa28.72■■■□□ 2.19
TOP3A-219ENST00000584887 ERBB3P21860 1342 aa28.71■■■□□ 2.19
TOP3A-219ENST00000584887 EXOC5O00471 708 aa28.71■■■□□ 2.19
TOP3A-219ENST00000584887 PTF1AQ7RTS3 328 aa28.7■■■□□ 2.18
TOP3A-219ENST00000584887 SBF2Q86WG5 1849 aa28.7■■■□□ 2.18
TOP3A-219ENST00000584887 ANKRD24Q8TF21 1146 aa28.69■■■□□ 2.18
TOP3A-219ENST00000584887 BCL11BQ9C0K0 894 aaPredicted RBP28.69■■■□□ 2.18
TOP3A-219ENST00000584887 USP47Q96K76 1375 aa28.69■■■□□ 2.18
TOP3A-219ENST00000584887 SLC24A1O60721 1099 aa28.68■■■□□ 2.18
TOP3A-219ENST00000584887 TNS2Q63HR2 1409 aa28.66■■■□□ 2.18
TOP3A-219ENST00000584887 COG3Q96JB2 828 aa28.65■■■□□ 2.18
TOP3A-219ENST00000584887 TMF1P82094 1093 aa28.64■■■□□ 2.18
TOP3A-219ENST00000584887 LTV1Q96GA3 475 aaPredicted RBP28.64■■■□□ 2.18
TOP3A-219ENST00000584887 PLSCR1O15162 318 aa28.63■■■□□ 2.17
TOP3A-219ENST00000584887 BCL9O00512 1426 aa28.62■■■□□ 2.17
TOP3A-219ENST00000584887 IL2RBP14784 551 aa28.62■■■□□ 2.17
TOP3A-219ENST00000584887 ANKRD36BQ8N2N9 1353 aa28.61■■■□□ 2.17
TOP3A-219ENST00000584887 RGPD3A6NKT7 1758 aaPredicted RBP28.6■■■□□ 2.17
TOP3A-219ENST00000584887 RGPD4Q7Z3J3 1758 aa28.6■■■□□ 2.17
TOP3A-219ENST00000584887 IP6K1Q92551 441 aa28.6■■■□□ 2.17
TOP3A-219ENST00000584887 PCGF6Q9BYE7 350 aa28.6■■■□□ 2.17
TOP3A-219ENST00000584887 FBLN1P23142 703 aa28.57■■■□□ 2.16
TOP3A-219ENST00000584887 AMPHP49418 695 aa28.57■■■□□ 2.16
TOP3A-219ENST00000584887 ACSBG1Q96GR2 724 aa28.57■■■□□ 2.16
TOP3A-219ENST00000584887 MAP3K19Q56UN5 1328 aa28.57■■■□□ 2.16
TOP3A-219ENST00000584887 KCNQ2O43526 872 aa28.56■■■□□ 2.16
TOP3A-219ENST00000584887 ANO8Q9HCE9 1232 aaPredicted RBP28.56■■■□□ 2.16
TOP3A-219ENST00000584887 KAT6BQ8WYB5 2073 aa28.54■■■□□ 2.16
TOP3A-219ENST00000584887 CDCA8Q53HL2 280 aa28.53■■■□□ 2.16
TOP3A-219ENST00000584887 PROM2Q8N271 834 aa28.53■■■□□ 2.16
TOP3A-219ENST00000584887 GGNBP2Q9H3C7 697 aa28.53■■■□□ 2.16
TOP3A-219ENST00000584887 HOXC9P31274 260 aa28.52■■■□□ 2.16
TOP3A-219ENST00000584887 TXNRD1Q16881 649 aa28.52■■■□□ 2.16
TOP3A-219ENST00000584887 SPON1Q9HCB6 807 aa28.52■■■□□ 2.16
TOP3A-219ENST00000584887 PPP1R1BQ9UD71 204 aaPredicted RBP28.51■■■□□ 2.15
TOP3A-219ENST00000584887 RRS1Q15050 365 aaKnown RBP28.5■■■□□ 2.15
TOP3A-219ENST00000584887 NHSQ6T4R5 1651 aa28.5■■■□□ 2.15
TOP3A-219ENST00000584887 FAM208AQ9UK61 1670 aaKnown RBP28.5■■■□□ 2.15
TOP3A-219ENST00000584887 FYB1O15117 783 aa28.49■■■□□ 2.15
TOP3A-219ENST00000584887 DDX54Q8TDD1 881 aaKnown RBP28.49■■■□□ 2.15
TOP3A-219ENST00000584887 STK32BQ9NY57 414 aa28.48■■■□□ 2.15
TOP3A-219ENST00000584887 TIMELESSQ9UNS1 1208 aa28.46■■■□□ 2.15
TOP3A-219ENST00000584887 RTL1A6NKG5 1358 aa28.45■■■□□ 2.14
TOP3A-219ENST00000584887 CLSPNQ9HAW4 1339 aa28.43■■■□□ 2.14
TOP3A-219ENST00000584887 PDGFDQ9GZP0 370 aaPredicted RBP28.43■■■□□ 2.14
TOP3A-219ENST00000584887 KIF20BQ96Q89 1820 aa28.42■■■□□ 2.14
TOP3A-219ENST00000584887 RGPD2P0DJD1 1756 aa28.42■■■□□ 2.14
TOP3A-219ENST00000584887 BTAF1O14981 1849 aa28.41■■■□□ 2.14
TOP3A-219ENST00000584887 ZBTB7AO95365 584 aa28.41■■■□□ 2.14
TOP3A-219ENST00000584887 CASZ1Q86V15 1759 aa28.4■■■□□ 2.14
TOP3A-219ENST00000584887 SLC15A2Q16348 729 aa28.4■■■□□ 2.14
TOP3A-219ENST00000584887 POLR3GLQ9BT43 218 aa28.4■■■□□ 2.14
TOP3A-219ENST00000584887 SMG6Q86US8 1419 aaKnown RBP28.4■■■□□ 2.14
TOP3A-219ENST00000584887 NSD3Q9BZ95 1437 aa28.4■■■□□ 2.14
TOP3A-219ENST00000584887 USHBP1Q8N6Y0 703 aa28.39■■■□□ 2.14
TOP3A-219ENST00000584887 MYOM1P52179 1685 aa28.38■■■□□ 2.13
TOP3A-219ENST00000584887 SYTL4Q96C24 671 aaPredicted RBP28.38■■■□□ 2.13
TOP3A-219ENST00000584887 MEGF6O75095 1541 aa28.38■■■□□ 2.13
TOP3A-219ENST00000584887 NBPF6Q5VWK0 638 aa28.37■■■□□ 2.13
TOP3A-219ENST00000584887 ZCRB1Q8TBF4 217 aaKnown RBP28.37■■■□□ 2.13
TOP3A-219ENST00000584887 NBPF4Q96M43 638 aa28.37■■■□□ 2.13
TOP3A-219ENST00000584887 CARD14Q9BXL6 1004 aa28.37■■■□□ 2.13
TOP3A-219ENST00000584887 ATF5Q9Y2D1 282 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms