RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 DDB1Q16531 1140 aa23.77■■□□□ 1.4
CCDC57-219ENST00000584717 RGPD5Q99666 1765 aa23.77■■□□□ 1.4
CCDC57-219ENST00000584717 SBF2Q86WG5 1849 aa23.77■■□□□ 1.4
CCDC57-219ENST00000584717 WDR17Q8IZU2 1322 aa23.76■■□□□ 1.39
CCDC57-219ENST00000584717 C11orf95C9JLR9 678 aaPredicted RBP23.75■■□□□ 1.39
CCDC57-219ENST00000584717 ARHGEF25Q86VW2 580 aa23.74■■□□□ 1.39
CCDC57-219ENST00000584717 ZNF692Q9BU19 519 aaPredicted RBP23.74■■□□□ 1.39
CCDC57-219ENST00000584717 RGPD3A6NKT7 1758 aaPredicted RBP23.73■■□□□ 1.39
CCDC57-219ENST00000584717 RGPD4Q7Z3J3 1758 aa23.73■■□□□ 1.39
CCDC57-219ENST00000584717 PTF1AQ7RTS3 328 aa23.72■■□□□ 1.39
CCDC57-219ENST00000584717 KCNH5Q8NCM2 988 aa23.72■■□□□ 1.39
CCDC57-219ENST00000584717 NFAT5O94916 1531 aa23.71■■□□□ 1.39
CCDC57-219ENST00000584717 KTN1Q86UP2 1357 aaKnown RBP23.71■■□□□ 1.39
CCDC57-219ENST00000584717 TTC21AQ8NDW8 1320 aa23.71■■□□□ 1.39
CCDC57-219ENST00000584717 CSB-PGBD3P0DP91 1061 aa23.71■■□□□ 1.39
CCDC57-219ENST00000584717 MARCH10Q8NA82 808 aaPredicted RBP23.7■■□□□ 1.38
CCDC57-219ENST00000584717 MON2Q7Z3U7 1717 aa23.7■■□□□ 1.38
CCDC57-219ENST00000584717 CARD10Q9BWT7 1032 aa23.68■■□□□ 1.38
CCDC57-219ENST00000584717 BCL11BQ9C0K0 894 aaPredicted RBP23.68■■□□□ 1.38
CCDC57-219ENST00000584717 PLSCR1O15162 318 aa23.67■■□□□ 1.38
CCDC57-219ENST00000584717 CDCA7Q9BWT1 371 aaPredicted RBP23.67■■□□□ 1.38
CCDC57-219ENST00000584717 SPON1Q9HCB6 807 aa23.67■■□□□ 1.38
CCDC57-219ENST00000584717 ANO8Q9HCE9 1232 aaPredicted RBP23.66■■□□□ 1.38
CCDC57-219ENST00000584717 PPP1R1BQ9UD71 204 aaPredicted RBP23.66■■□□□ 1.38
CCDC57-219ENST00000584717 KCNQ2O43526 872 aa23.65■■□□□ 1.38
CCDC57-219ENST00000584717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.65■■□□□ 1.38
CCDC57-219ENST00000584717 BCL9O00512 1426 aa23.63■■□□□ 1.37
CCDC57-219ENST00000584717 ABCC6O95255 1503 aa23.63■■□□□ 1.37
CCDC57-219ENST00000584717 SBNO2Q9Y2G9 1366 aa23.63■■□□□ 1.37
CCDC57-219ENST00000584717 CASZ1Q86V15 1759 aa23.62■■□□□ 1.37
CCDC57-219ENST00000584717 CCDC7Q96M83 1385 aa23.62■■□□□ 1.37
CCDC57-219ENST00000584717 CD163L1Q9NR16 1453 aa23.62■■□□□ 1.37
CCDC57-219ENST00000584717 USP54Q70EL1 1684 aa23.61■■□□□ 1.37
CCDC57-219ENST00000584717 EXOC5O00471 708 aa23.61■■□□□ 1.37
CCDC57-219ENST00000584717 NME9Q86XW9 330 aa23.61■■□□□ 1.37
CCDC57-219ENST00000584717 PROM2Q8N271 834 aa23.61■■□□□ 1.37
CCDC57-219ENST00000584717 CARD11Q9BXL7 1154 aa23.61■■□□□ 1.37
CCDC57-219ENST00000584717 TNS2Q63HR2 1409 aa23.6■■□□□ 1.37
CCDC57-219ENST00000584717 LTN1O94822 1766 aa23.6■■□□□ 1.37
CCDC57-219ENST00000584717 TMC1Q8TDI8 760 aa23.59■■□□□ 1.37
CCDC57-219ENST00000584717 USP31Q70CQ4 1352 aa23.59■■□□□ 1.37
CCDC57-219ENST00000584717 PDGFDQ9GZP0 370 aaPredicted RBP23.58■■□□□ 1.37
CCDC57-219ENST00000584717 NINLQ9Y2I6 1382 aa23.56■■□□□ 1.36
CCDC57-219ENST00000584717 TXNRD1Q16881 649 aa23.56■■□□□ 1.36
CCDC57-219ENST00000584717 NLRP2Q9NX02 1062 aa23.56■■□□□ 1.36
CCDC57-219ENST00000584717 ERBB3P21860 1342 aa23.56■■□□□ 1.36
CCDC57-219ENST00000584717 NHSQ6T4R5 1651 aa23.55■■□□□ 1.36
CCDC57-219ENST00000584717 HDGFL2Q7Z4V5 671 aaPredicted RBP23.55■■□□□ 1.36
CCDC57-219ENST00000584717 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
CCDC57-219ENST00000584717 ZBTB7AO95365 584 aa23.54■■□□□ 1.36
CCDC57-219ENST00000584717 EDC4Q6P2E9 1401 aaKnown RBP23.53■■□□□ 1.36
CCDC57-219ENST00000584717 YY1P25490 414 aa23.53■■□□□ 1.36
CCDC57-219ENST00000584717 ACSBG1Q96GR2 724 aa23.53■■□□□ 1.36
CCDC57-219ENST00000584717 STK32BQ9NY57 414 aa23.53■■□□□ 1.36
CCDC57-219ENST00000584717 ANKRD24Q8TF21 1146 aa23.52■■□□□ 1.36
CCDC57-219ENST00000584717 A0A1W2PP64 1363 aa23.52■■□□□ 1.36
CCDC57-219ENST00000584717 MYOM1P52179 1685 aa23.51■■□□□ 1.35
CCDC57-219ENST00000584717 TONSLQ96HA7 1378 aa23.51■■□□□ 1.35
CCDC57-219ENST00000584717 IL2RBP14784 551 aa23.5■■□□□ 1.35
CCDC57-219ENST00000584717 DCAF8L1A6NGE4 600 aa23.49■■□□□ 1.35
CCDC57-219ENST00000584717 SLC15A2Q16348 729 aa23.49■■□□□ 1.35
CCDC57-219ENST00000584717 TERF2IPQ9NYB0 399 aa23.49■■□□□ 1.35
CCDC57-219ENST00000584717 ATF5Q9Y2D1 282 aaPredicted RBP23.49■■□□□ 1.35
CCDC57-219ENST00000584717 PTGER2P43116 358 aa23.47■■□□□ 1.35
CCDC57-219ENST00000584717 BTAF1O14981 1849 aa23.47■■□□□ 1.35
CCDC57-219ENST00000584717 KAT6BQ8WYB5 2073 aa23.44■■□□□ 1.34
CCDC57-219ENST00000584717 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
CCDC57-219ENST00000584717 LTV1Q96GA3 475 aaPredicted RBP23.43■■□□□ 1.34
CCDC57-219ENST00000584717 PUS7Q96PZ0 661 aaKnown RBP23.42■■□□□ 1.34
CCDC57-219ENST00000584717 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
CCDC57-219ENST00000584717 IP6K1Q92551 441 aa23.41■■□□□ 1.34
CCDC57-219ENST00000584717 TESK2Q96S53 571 aa23.4■■□□□ 1.34
CCDC57-219ENST00000584717 MTFR1LQ9H019 292 aa23.4■■□□□ 1.34
CCDC57-219ENST00000584717 ST20-MTHFSA0A0A6YYL1 179 aa23.39■■□□□ 1.33
CCDC57-219ENST00000584717 UTRNP46939 3433 aa23.39■■□□□ 1.33
CCDC57-219ENST00000584717 DDX54Q8TDD1 881 aaKnown RBP23.38■■□□□ 1.33
CCDC57-219ENST00000584717 FHDC1Q9C0D6 1143 aaPredicted RBP23.38■■□□□ 1.33
CCDC57-219ENST00000584717 FBLN1P23142 703 aa23.37■■□□□ 1.33
CCDC57-219ENST00000584717 ZNF827Q17R98 1081 aa23.37■■□□□ 1.33
CCDC57-219ENST00000584717 COG3Q96JB2 828 aa23.37■■□□□ 1.33
CCDC57-219ENST00000584717 LRRC4BQ9NT99 713 aa23.37■■□□□ 1.33
CCDC57-219ENST00000584717 MAP3K19Q56UN5 1328 aa23.36■■□□□ 1.33
CCDC57-219ENST00000584717 SGIP1Q9BQI5 828 aa23.36■■□□□ 1.33
CCDC57-219ENST00000584717 RGPD2P0DJD1 1756 aa23.35■■□□□ 1.33
CCDC57-219ENST00000584717 SYT17Q9BSW7 474 aa23.35■■□□□ 1.33
CCDC57-219ENST00000584717 HOXC9P31274 260 aa23.34■■□□□ 1.33
CCDC57-219ENST00000584717 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.33
CCDC57-219ENST00000584717 AMPHP49418 695 aa23.33■■□□□ 1.33
CCDC57-219ENST00000584717 SHANK3Q9BYB0 1731 aa23.31■■□□□ 1.32
CCDC57-219ENST00000584717 ANKRD36BQ8N2N9 1353 aa23.31■■□□□ 1.32
CCDC57-219ENST00000584717 SYTL4Q96C24 671 aaPredicted RBP23.31■■□□□ 1.32
CCDC57-219ENST00000584717 ARXQ96QS3 562 aa23.31■■□□□ 1.32
CCDC57-219ENST00000584717 MEGF6O75095 1541 aa23.3■■□□□ 1.32
CCDC57-219ENST00000584717 PRIM1P49642 420 aaKnown RBP23.29■■□□□ 1.32
CCDC57-219ENST00000584717 KCNQ4P56696 695 aa23.29■■□□□ 1.32
CCDC57-219ENST00000584717 AKT1S1Q96B36 256 aa23.29■■□□□ 1.32
CCDC57-219ENST00000584717 QSER1Q2KHR3 1735 aa23.28■■□□□ 1.32
CCDC57-219ENST00000584717 RRS1Q15050 365 aaKnown RBP23.28■■□□□ 1.32
CCDC57-219ENST00000584717 SLC27A3Q5K4L6 730 aa23.28■■□□□ 1.32
CCDC57-219ENST00000584717 TUBGCP6Q96RT7 1819 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms