RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 TERF2IPQ9NYB0 399 aa29.04■■■□□ 2.24
TOP3A-218ENST00000584669 RGPD5Q99666 1765 aa29.03■■■□□ 2.24
TOP3A-218ENST00000584669 NINLQ9Y2I6 1382 aa29.03■■■□□ 2.24
TOP3A-218ENST00000584669 AATKQ6ZMQ8 1374 aa29.02■■■□□ 2.24
TOP3A-218ENST00000584669 PSDA5PKW4 1024 aaPredicted RBP29.02■■■□□ 2.24
TOP3A-218ENST00000584669 EDC4Q6P2E9 1401 aaKnown RBP29.02■■■□□ 2.24
TOP3A-218ENST00000584669 COL18A1P39060 1754 aa29.01■■■□□ 2.23
TOP3A-218ENST00000584669 TNS1Q9HBL0 1735 aaKnown RBP29■■■□□ 2.23
TOP3A-218ENST00000584669 NME9Q86XW9 330 aa29■■■□□ 2.23
TOP3A-218ENST00000584669 THRAP3Q9Y2W1 955 aaKnown RBP29■■■□□ 2.23
TOP3A-218ENST00000584669 CRB1P82279 1406 aa29■■■□□ 2.23
TOP3A-218ENST00000584669 HSPA5P11021 654 aaKnown RBP28.97■■■□□ 2.23
TOP3A-218ENST00000584669 EIF4G2P78344 907 aaKnown RBP eCLIP28.97■■■□□ 2.23
TOP3A-218ENST00000584669 TOM1L2Q6ZVM7 507 aa28.97■■■□□ 2.23
TOP3A-218ENST00000584669 NFAT5O94916 1531 aa28.97■■■□□ 2.23
TOP3A-218ENST00000584669 LTN1O94822 1766 aa28.97■■■□□ 2.23
TOP3A-218ENST00000584669 DISP2A7MBM2 1401 aa28.96■■■□□ 2.23
TOP3A-218ENST00000584669 CDCA8Q53HL2 280 aa28.96■■■□□ 2.23
TOP3A-218ENST00000584669 KCNH5Q8NCM2 988 aa28.96■■■□□ 2.23
TOP3A-218ENST00000584669 USP31Q70CQ4 1352 aa28.96■■■□□ 2.23
TOP3A-218ENST00000584669 SRCAPQ6ZRS2 3230 aa28.95■■■□□ 2.23
TOP3A-218ENST00000584669 APBA3O96018 575 aa28.95■■■□□ 2.22
TOP3A-218ENST00000584669 EZH2Q15910 746 aaKnown RBP28.95■■■□□ 2.22
TOP3A-218ENST00000584669 ANKRD36BQ8N2N9 1353 aa28.95■■■□□ 2.22
TOP3A-218ENST00000584669 ARHGEF25Q86VW2 580 aa28.93■■■□□ 2.22
TOP3A-218ENST00000584669 AXIN2Q9Y2T1 843 aa28.93■■■□□ 2.22
TOP3A-218ENST00000584669 KIF20BQ96Q89 1820 aa28.92■■■□□ 2.22
TOP3A-218ENST00000584669 CSB-PGBD3P0DP91 1061 aa28.92■■■□□ 2.22
TOP3A-218ENST00000584669 PARP4Q9UKK3 1724 aaKnown RBP28.91■■■□□ 2.22
TOP3A-218ENST00000584669 WDR17Q8IZU2 1322 aa28.91■■■□□ 2.22
TOP3A-218ENST00000584669 R3HDM1Q15032 1099 aaKnown RBP28.9■■■□□ 2.22
TOP3A-218ENST00000584669 OVOS2A0A0J9YW53 1432 aa28.89■■■□□ 2.22
TOP3A-218ENST00000584669 OVOS2Q6IE36 1432 aa28.89■■■□□ 2.22
TOP3A-218ENST00000584669 CAMKK2Q96RR4 588 aa28.89■■■□□ 2.22
TOP3A-218ENST00000584669 DDB1Q16531 1140 aa28.87■■■□□ 2.21
TOP3A-218ENST00000584669 POLR3GLQ9BT43 218 aa28.85■■■□□ 2.21
TOP3A-218ENST00000584669 OVOS2A0A0G2JMS6 1433 aa28.85■■■□□ 2.21
TOP3A-218ENST00000584669 LRRC37A3O60309 1634 aa28.84■■■□□ 2.21
TOP3A-218ENST00000584669 PARD3Q8TEW0 1356 aa28.84■■■□□ 2.21
TOP3A-218ENST00000584669 LRP5O75197 1615 aa28.83■■■□□ 2.21
TOP3A-218ENST00000584669 WNK3Q9BYP7 1800 aa28.82■■■□□ 2.2
TOP3A-218ENST00000584669 ABCC6O95255 1503 aa28.81■■■□□ 2.2
TOP3A-218ENST00000584669 C11orf95C9JLR9 678 aaPredicted RBP28.81■■■□□ 2.2
TOP3A-218ENST00000584669 CARD10Q9BWT7 1032 aa28.81■■■□□ 2.2
TOP3A-218ENST00000584669 CDCA7Q9BWT1 371 aaPredicted RBP28.8■■■□□ 2.2
TOP3A-218ENST00000584669 CARD14Q9BXL6 1004 aa28.8■■■□□ 2.2
TOP3A-218ENST00000584669 COG3Q96JB2 828 aa28.78■■■□□ 2.2
TOP3A-218ENST00000584669 NSD3Q9BZ95 1437 aa28.77■■■□□ 2.2
TOP3A-218ENST00000584669 FYB1O15117 783 aa28.77■■■□□ 2.2
TOP3A-218ENST00000584669 GGNBP2Q9H3C7 697 aa28.77■■■□□ 2.2
TOP3A-218ENST00000584669 PEAK1Q9H792 1746 aa28.77■■■□□ 2.2
TOP3A-218ENST00000584669 RREB1Q92766 1687 aa28.76■■■□□ 2.19
TOP3A-218ENST00000584669 MARCH10Q8NA82 808 aaPredicted RBP28.75■■■□□ 2.19
TOP3A-218ENST00000584669 CCDC7Q96M83 1385 aa28.75■■■□□ 2.19
TOP3A-218ENST00000584669 NBPF14Q5TI25 921 aa28.74■■■□□ 2.19
TOP3A-218ENST00000584669 NLRP2Q9NX02 1062 aa28.74■■■□□ 2.19
TOP3A-218ENST00000584669 NUP188Q5SRE5 1749 aa28.74■■■□□ 2.19
TOP3A-218ENST00000584669 FBLN1P23142 703 aa28.73■■■□□ 2.19
TOP3A-218ENST00000584669 ERBB3P21860 1342 aa28.71■■■□□ 2.19
TOP3A-218ENST00000584669 EXOC5O00471 708 aa28.71■■■□□ 2.19
TOP3A-218ENST00000584669 ANKRD26Q9UPS8 1709 aa28.71■■■□□ 2.19
TOP3A-218ENST00000584669 PTF1AQ7RTS3 328 aa28.7■■■□□ 2.18
TOP3A-218ENST00000584669 SBF2Q86WG5 1849 aa28.7■■■□□ 2.18
TOP3A-218ENST00000584669 RGPD2P0DJD1 1756 aa28.7■■■□□ 2.18
TOP3A-218ENST00000584669 ANKRD24Q8TF21 1146 aa28.69■■■□□ 2.18
TOP3A-218ENST00000584669 BCL11BQ9C0K0 894 aaPredicted RBP28.69■■■□□ 2.18
TOP3A-218ENST00000584669 MAP2P11137 1827 aaKnown RBP28.67■■■□□ 2.18
TOP3A-218ENST00000584669 MAP3K19Q56UN5 1328 aa28.67■■■□□ 2.18
TOP3A-218ENST00000584669 FAM208AQ9UK61 1670 aaKnown RBP28.66■■■□□ 2.18
TOP3A-218ENST00000584669 TNS2Q63HR2 1409 aa28.66■■■□□ 2.18
TOP3A-218ENST00000584669 PANK3Q9H999 370 aa28.65■■■□□ 2.18
TOP3A-218ENST00000584669 IP6K1Q92551 441 aa28.64■■■□□ 2.18
TOP3A-218ENST00000584669 LTV1Q96GA3 475 aaPredicted RBP28.64■■■□□ 2.18
TOP3A-218ENST00000584669 KIF7Q2M1P5 1343 aa28.64■■■□□ 2.17
TOP3A-218ENST00000584669 PLSCR1O15162 318 aa28.63■■■□□ 2.17
TOP3A-218ENST00000584669 RRS1Q15050 365 aaKnown RBP28.63■■■□□ 2.17
TOP3A-218ENST00000584669 BCL9O00512 1426 aa28.62■■■□□ 2.17
TOP3A-218ENST00000584669 IL2RBP14784 551 aa28.62■■■□□ 2.17
TOP3A-218ENST00000584669 CGNL1Q0VF96 1302 aa28.62■■■□□ 2.17
TOP3A-218ENST00000584669 RGPD3A6NKT7 1758 aaPredicted RBP28.6■■■□□ 2.17
TOP3A-218ENST00000584669 RGPD4Q7Z3J3 1758 aa28.6■■■□□ 2.17
TOP3A-218ENST00000584669 HOXC9P31274 260 aa28.6■■■□□ 2.17
TOP3A-218ENST00000584669 AMPHP49418 695 aa28.6■■■□□ 2.17
TOP3A-218ENST00000584669 ACSBG1Q96GR2 724 aa28.57■■■□□ 2.16
TOP3A-218ENST00000584669 RTL1A6NKG5 1358 aa28.56■■■□□ 2.16
TOP3A-218ENST00000584669 KCNQ2O43526 872 aa28.56■■■□□ 2.16
TOP3A-218ENST00000584669 ANO8Q9HCE9 1232 aaPredicted RBP28.56■■■□□ 2.16
TOP3A-218ENST00000584669 KAT6BQ8WYB5 2073 aa28.54■■■□□ 2.16
TOP3A-218ENST00000584669 PROM2Q8N271 834 aa28.53■■■□□ 2.16
TOP3A-218ENST00000584669 TXNRD1Q16881 649 aa28.52■■■□□ 2.16
TOP3A-218ENST00000584669 SPON1Q9HCB6 807 aa28.52■■■□□ 2.16
TOP3A-218ENST00000584669 PPP1R1BQ9UD71 204 aaPredicted RBP28.51■■■□□ 2.15
TOP3A-218ENST00000584669 EMILIN1Q9Y6C2 1016 aa28.51■■■□□ 2.15
TOP3A-218ENST00000584669 NHSQ6T4R5 1651 aa28.5■■■□□ 2.15
TOP3A-218ENST00000584669 DDX54Q8TDD1 881 aaKnown RBP28.49■■■□□ 2.15
TOP3A-218ENST00000584669 FLT4P35916 1363 aa28.49■■■□□ 2.15
TOP3A-218ENST00000584669 HSP90AB2PQ58FF8 381 aa28.48■■■□□ 2.15
TOP3A-218ENST00000584669 STK32BQ9NY57 414 aa28.48■■■□□ 2.15
TOP3A-218ENST00000584669 WASHC2AQ641Q2 1341 aa28.47■■■□□ 2.15
TOP3A-218ENST00000584669 TNNT2P45379 298 aaPredicted RBP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 598.1 ms