RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
GGA3-218ENST00000584243 BCL9O00512 1426 aa11.65□□□□□ -0.54
GGA3-218ENST00000584243 QSER1Q2KHR3 1735 aa11.65□□□□□ -0.54
GGA3-218ENST00000584243 MYOM3Q5VTT5 1437 aa11.63□□□□□ -0.55
GGA3-218ENST00000584243 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
GGA3-218ENST00000584243 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
GGA3-218ENST00000584243 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
GGA3-218ENST00000584243 LBX1P52954 281 aa11.62□□□□□ -0.55
GGA3-218ENST00000584243 MARCH10Q8NA82 808 aaPredicted RBP11.62□□□□□ -0.55
GGA3-218ENST00000584243 LRRC4BQ9NT99 713 aa11.62□□□□□ -0.55
GGA3-218ENST00000584243 PLEKHH1Q9ULM0 1364 aa11.62□□□□□ -0.55
GGA3-218ENST00000584243 TUBGCP6Q96RT7 1819 aa11.62□□□□□ -0.55
GGA3-218ENST00000584243 C10orf71Q711Q0 1435 aa11.61□□□□□ -0.55
GGA3-218ENST00000584243 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
GGA3-218ENST00000584243 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
GGA3-218ENST00000584243 C16orf71Q8IYS4 520 aaPredicted RBP11.6□□□□□ -0.55
GGA3-218ENST00000584243 A0A0C4DFX4 3053 aa11.6□□□□□ -0.55
GGA3-218ENST00000584243 PXDNLA1KZ92 1463 aa11.59□□□□□ -0.55
GGA3-218ENST00000584243 PRPF38BQ5VTL8 546 aaKnown RBP11.59□□□□□ -0.55
GGA3-218ENST00000584243 THRAP3Q9Y2W1 955 aaKnown RBP11.59□□□□□ -0.55
GGA3-218ENST00000584243 LMO7Q8WWI1 1683 aa11.59□□□□□ -0.55
GGA3-218ENST00000584243 CD2APQ9Y5K6 639 aa11.58□□□□□ -0.56
GGA3-218ENST00000584243 DLL1O00548 723 aa11.57□□□□□ -0.56
GGA3-218ENST00000584243 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
GGA3-218ENST00000584243 SMC1BQ8NDV3 1235 aa11.57□□□□□ -0.56
GGA3-218ENST00000584243 CLTCL1P53675 1640 aa11.57□□□□□ -0.56
GGA3-218ENST00000584243 KCPQ6ZWJ8 1503 aa11.56□□□□□ -0.56
GGA3-218ENST00000584243 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
GGA3-218ENST00000584243 IGSF1Q8N6C5 1336 aa11.56□□□□□ -0.56
GGA3-218ENST00000584243 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
GGA3-218ENST00000584243 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
GGA3-218ENST00000584243 DAPK1P53355 1430 aa11.54□□□□□ -0.56
GGA3-218ENST00000584243 EVA1CP58658 441 aa11.54□□□□□ -0.56
GGA3-218ENST00000584243 ZC3H6P61129 1189 aaKnown RBP11.54□□□□□ -0.56
GGA3-218ENST00000584243 DDB1Q16531 1140 aa11.54□□□□□ -0.56
GGA3-218ENST00000584243 IFT172Q9UG01 1749 aa11.54□□□□□ -0.56
GGA3-218ENST00000584243 RRAGCQ9HB90 399 aa11.53□□□□□ -0.56
GGA3-218ENST00000584243 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
GGA3-218ENST00000584243 NHSQ6T4R5 1651 aa11.52□□□□□ -0.56
GGA3-218ENST00000584243 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
GGA3-218ENST00000584243 AKAP12Q02952 1782 aa11.51□□□□□ -0.57
GGA3-218ENST00000584243 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
GGA3-218ENST00000584243 CHIC2Q9UKJ5 165 aa11.51□□□□□ -0.57
GGA3-218ENST00000584243 ANKRD30AQ9BXX3 1397 aa11.51□□□□□ -0.57
GGA3-218ENST00000584243 SZT2Q5T011 3432 aa11.51□□□□□ -0.57
GGA3-218ENST00000584243 BRD4O60885 1362 aaPredicted RBP11.5□□□□□ -0.57
GGA3-218ENST00000584243 AIDAQ96BJ3 306 aa11.49□□□□□ -0.57
GGA3-218ENST00000584243 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
GGA3-218ENST00000584243 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
GGA3-218ENST00000584243 WNK3Q9BYP7 1800 aa11.49□□□□□ -0.57
GGA3-218ENST00000584243 PITPNM2Q9BZ72 1349 aa11.48□□□□□ -0.57
GGA3-218ENST00000584243 CNTNAP1P78357 1384 aa11.48□□□□□ -0.57
GGA3-218ENST00000584243 CRB1P82279 1406 aa11.48□□□□□ -0.57
GGA3-218ENST00000584243 BTAF1O14981 1849 aa11.47□□□□□ -0.57
GGA3-218ENST00000584243 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
GGA3-218ENST00000584243 RAB3GAP2Q9H2M9 1393 aa11.47□□□□□ -0.57
GGA3-218ENST00000584243 COL23A1Q86Y22 540 aaPredicted RBP11.47□□□□□ -0.57
GGA3-218ENST00000584243 TFCP2L1Q9NZI6 479 aa11.47□□□□□ -0.57
GGA3-218ENST00000584243 QRICH2Q9H0J4 1663 aa11.46□□□□□ -0.57
GGA3-218ENST00000584243 ANKRD50Q9ULJ7 1429 aa11.46□□□□□ -0.57
GGA3-218ENST00000584243 KCNQ4P56696 695 aa11.46□□□□□ -0.57
GGA3-218ENST00000584243 STK26Q9P289 416 aa11.46□□□□□ -0.57
GGA3-218ENST00000584243 VIRMAQ69YN4 1812 aaKnown RBP11.46□□□□□ -0.58
GGA3-218ENST00000584243 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
GGA3-218ENST00000584243 PLEKHG2Q9H7P9 1386 aa11.44□□□□□ -0.58
GGA3-218ENST00000584243 KNDC1Q76NI1 1749 aa11.44□□□□□ -0.58
GGA3-218ENST00000584243 VEGFBP49765 207 aa11.44□□□□□ -0.58
GGA3-218ENST00000584243 HABP4Q5JVS0 413 aaKnown RBP11.44□□□□□ -0.58
GGA3-218ENST00000584243 C9orf131Q5VYM1 1079 aa11.44□□□□□ -0.58
GGA3-218ENST00000584243 ACSBG1Q96GR2 724 aa11.44□□□□□ -0.58
GGA3-218ENST00000584243 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
GGA3-218ENST00000584243 CPDO75976 1380 aa11.43□□□□□ -0.58
GGA3-218ENST00000584243 ABCC11Q96J66 1382 aa11.43□□□□□ -0.58
GGA3-218ENST00000584243 TRPM1Q7Z4N2 1603 aa11.43□□□□□ -0.58
GGA3-218ENST00000584243 KDM2BQ8NHM5 1336 aa11.43□□□□□ -0.58
GGA3-218ENST00000584243 HIRIP3Q9BW71 556 aaPredicted RBP11.43□□□□□ -0.58
GGA3-218ENST00000584243 GPRASP1Q5JY77 1395 aa11.42□□□□□ -0.58
GGA3-218ENST00000584243 USP6P35125 1406 aa11.42□□□□□ -0.58
GGA3-218ENST00000584243 MCOLN1Q9GZU1 580 aa11.41□□□□□ -0.58
GGA3-218ENST00000584243 ANKARQ7Z5J8 1434 aa11.41□□□□□ -0.58
GGA3-218ENST00000584243 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
GGA3-218ENST00000584243 NUTM2GQ5VZR2 741 aa11.4□□□□□ -0.58
GGA3-218ENST00000584243 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
GGA3-218ENST00000584243 FXR1P51114 621 aaKnown RBP eCLIP11.39□□□□□ -0.59
GGA3-218ENST00000584243 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
GGA3-218ENST00000584243 ARHGAP27Q6ZUM4 889 aa11.39□□□□□ -0.59
GGA3-218ENST00000584243 ANKRD30BQ9BXX2 1392 aa11.39□□□□□ -0.59
GGA3-218ENST00000584243 PRR36Q9H6K5 1346 aa11.38□□□□□ -0.59
GGA3-218ENST00000584243 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
GGA3-218ENST00000584243 PIK3C2AO00443 1686 aa11.37□□□□□ -0.59
GGA3-218ENST00000584243 COL18A1P39060 1754 aa11.37□□□□□ -0.59
GGA3-218ENST00000584243 MSH5O43196 834 aa11.37□□□□□ -0.59
GGA3-218ENST00000584243 SOX10P56693 466 aa11.37□□□□□ -0.59
GGA3-218ENST00000584243 ADAMTS7Q9UKP4 1686 aa11.36□□□□□ -0.59
GGA3-218ENST00000584243 TMEM132EQ6IEE7 984 aa11.36□□□□□ -0.59
GGA3-218ENST00000584243 SMIM5Q71RC9 77 aa11.35□□□□□ -0.59
GGA3-218ENST00000584243 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
GGA3-218ENST00000584243 ROCK1Q13464 1354 aa11.35□□□□□ -0.59
GGA3-218ENST00000584243 COL6A3P12111 3177 aa11.35□□□□□ -0.59
GGA3-218ENST00000584243 PPLO60437 1756 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms