RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 TIMP2P16035 220 aa9.33□□□□□ -0.92
PRKCA-205ENST00000583775 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
PRKCA-205ENST00000583775 BAP1Q92560 729 aa9.33□□□□□ -0.92
PRKCA-205ENST00000583775 BEGAINQ9BUH8 593 aa9.33□□□□□ -0.92
PRKCA-205ENST00000583775 VARSP26640 1264 aaKnown RBP9.32□□□□□ -0.92
PRKCA-205ENST00000583775 KCNH2Q12809 1159 aa9.31□□□□□ -0.92
PRKCA-205ENST00000583775 NNTQ13423 1086 aa9.31□□□□□ -0.92
PRKCA-205ENST00000583775 ZNF511Q8NB15 262 aa9.31□□□□□ -0.92
PRKCA-205ENST00000583775 ATP1B4Q9UN42 357 aaPredicted RBP9.31□□□□□ -0.92
PRKCA-205ENST00000583775 PBRM1Q86U86 1689 aa9.31□□□□□ -0.92
PRKCA-205ENST00000583775 AQRO60306 1485 aaKnown RBP eCLIP9.3□□□□□ -0.92
PRKCA-205ENST00000583775 DESI1Q6ICB0 168 aa9.3□□□□□ -0.92
PRKCA-205ENST00000583775 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
PRKCA-205ENST00000583775 FHAD1B1AJZ9 1412 aa9.3□□□□□ -0.92
PRKCA-205ENST00000583775 IFT140Q96RY7 1462 aa9.29□□□□□ -0.92
PRKCA-205ENST00000583775 LINC01559Q495D7 138 aa9.29□□□□□ -0.92
PRKCA-205ENST00000583775 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
PRKCA-205ENST00000583775 C6orf229H3BNL8 230 aa9.28□□□□□ -0.92
PRKCA-205ENST00000583775 KCNMA1Q12791 1236 aa9.28□□□□□ -0.92
PRKCA-205ENST00000583775 SUZ12Q15022 739 aaKnown RBP9.28□□□□□ -0.92
PRKCA-205ENST00000583775 TMEM132AQ24JP5 1023 aa9.28□□□□□ -0.92
PRKCA-205ENST00000583775 PPARGC1BQ86YN6 1023 aaKnown RBP9.28□□□□□ -0.92
PRKCA-205ENST00000583775 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
PRKCA-205ENST00000583775 CDK15Q96Q40 435 aa9.28□□□□□ -0.92
PRKCA-205ENST00000583775 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
PRKCA-205ENST00000583775 SAMD9Q5K651 1589 aa9.28□□□□□ -0.92
PRKCA-205ENST00000583775 CFAP43Q8NDM7 1665 aa9.27□□□□□ -0.93
PRKCA-205ENST00000583775 ADH1CP00326 375 aa9.27□□□□□ -0.93
PRKCA-205ENST00000583775 POLR3EQ9NVU0 708 aa9.27□□□□□ -0.93
PRKCA-205ENST00000583775 TIAM1Q13009 1591 aa9.27□□□□□ -0.93
PRKCA-205ENST00000583775 TDRD9Q8NDG6 1382 aaKnown RBP9.26□□□□□ -0.93
PRKCA-205ENST00000583775 ADAMTS12P58397 1594 aa9.26□□□□□ -0.93
PRKCA-205ENST00000583775 WDR4P57081 412 aaKnown RBP9.26□□□□□ -0.93
PRKCA-205ENST00000583775 SCARF1Q14162 830 aa9.26□□□□□ -0.93
PRKCA-205ENST00000583775 DDRGK1Q96HY6 314 aa9.26□□□□□ -0.93
PRKCA-205ENST00000583775 GRIN2BQ13224 1484 aa9.26□□□□□ -0.93
PRKCA-205ENST00000583775 THOC2Q8NI27 1593 aaKnown RBP9.25□□□□□ -0.93
PRKCA-205ENST00000583775 RRBP1Q9P2E9 1410 aaKnown RBP9.25□□□□□ -0.93
PRKCA-205ENST00000583775 NDUFV2P19404 249 aa9.25□□□□□ -0.93
PRKCA-205ENST00000583775 PRR7Q8TB68 274 aa9.25□□□□□ -0.93
PRKCA-205ENST00000583775 FYCO1Q9BQS8 1478 aa9.25□□□□□ -0.93
PRKCA-205ENST00000583775 MOXD2PA6NHM9 499 aa9.24□□□□□ -0.93
PRKCA-205ENST00000583775 CASKIN1Q8WXD9 1431 aa9.23□□□□□ -0.93
PRKCA-205ENST00000583775 PROCA1Q8NCQ7 364 aaPredicted RBP9.23□□□□□ -0.93
PRKCA-205ENST00000583775 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
PRKCA-205ENST00000583775 FMN1Q68DA7 1419 aa9.22□□□□□ -0.93
PRKCA-205ENST00000583775 SPDYE5A6NIY4 337 aa9.22□□□□□ -0.93
PRKCA-205ENST00000583775 CSPP1Q1MSJ5 1256 aa9.22□□□□□ -0.93
PRKCA-205ENST00000583775 LYPD8Q6UX82 237 aa9.22□□□□□ -0.93
PRKCA-205ENST00000583775 PCF11O94913 1555 aaKnown RBP9.21□□□□□ -0.93
PRKCA-205ENST00000583775 PPFIA3O75145 1194 aa9.21□□□□□ -0.94
PRKCA-205ENST00000583775 GRM5P41594 1212 aa9.21□□□□□ -0.94
PRKCA-205ENST00000583775 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.94
PRKCA-205ENST00000583775 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.94
PRKCA-205ENST00000583775 NR3C2P08235 984 aa9.2□□□□□ -0.94
PRKCA-205ENST00000583775 MTMR2Q13614 643 aa9.2□□□□□ -0.94
PRKCA-205ENST00000583775 FAM174AQ8TBP5 190 aa9.2□□□□□ -0.94
PRKCA-205ENST00000583775 ITPKCQ96DU7 683 aa9.2□□□□□ -0.94
PRKCA-205ENST00000583775 IQGAP2Q13576 1575 aa9.2□□□□□ -0.94
PRKCA-205ENST00000583775 F12P00748 615 aaPredicted RBP9.19□□□□□ -0.94
PRKCA-205ENST00000583775 GJA5P36382 358 aa9.19□□□□□ -0.94
PRKCA-205ENST00000583775 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
PRKCA-205ENST00000583775 KANK4Q5T7N3 995 aaPredicted RBP9.19□□□□□ -0.94
PRKCA-205ENST00000583775 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
PRKCA-205ENST00000583775 FOXJ1Q92949 421 aa9.19□□□□□ -0.94
PRKCA-205ENST00000583775 SNAPC4Q5SXM2 1469 aa9.19□□□□□ -0.94
PRKCA-205ENST00000583775 UGGT2Q9NYU1 1516 aa9.19□□□□□ -0.94
PRKCA-205ENST00000583775 EIF4G3O43432 1585 aaKnown RBP9.19□□□□□ -0.94
PRKCA-205ENST00000583775 ZIC2O95409 532 aaPredicted RBP9.18□□□□□ -0.94
PRKCA-205ENST00000583775 RANGAP1P46060 587 aaPredicted RBP9.18□□□□□ -0.94
PRKCA-205ENST00000583775 KRT76Q01546 638 aa9.18□□□□□ -0.94
PRKCA-205ENST00000583775 ERCC6Q03468 1493 aa9.18□□□□□ -0.94
PRKCA-205ENST00000583775 MAGI1Q96QZ7 1491 aaPredicted RBP9.18□□□□□ -0.94
PRKCA-205ENST00000583775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.17□□□□□ -0.94
PRKCA-205ENST00000583775 NR5A1Q13285 461 aa9.17□□□□□ -0.94
PRKCA-205ENST00000583775 KCTD17Q8N5Z5 321 aa9.17□□□□□ -0.94
PRKCA-205ENST00000583775 LIMD1Q9UGP4 676 aa9.17□□□□□ -0.94
PRKCA-205ENST00000583775 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
PRKCA-205ENST00000583775 ZNF608Q9ULD9 1512 aaPredicted RBP9.16□□□□□ -0.94
PRKCA-205ENST00000583775 FHOD3Q2V2M9 1422 aa9.16□□□□□ -0.94
PRKCA-205ENST00000583775 CCNB3Q8WWL7 1395 aa9.16□□□□□ -0.94
PRKCA-205ENST00000583775 SOS2Q07890 1332 aaPredicted RBP9.16□□□□□ -0.94
PRKCA-205ENST00000583775 CLSPNQ9HAW4 1339 aa9.16□□□□□ -0.94
PRKCA-205ENST00000583775 MAN1A2O60476 641 aa9.16□□□□□ -0.94
PRKCA-205ENST00000583775 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
PRKCA-205ENST00000583775 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
PRKCA-205ENST00000583775 PCDHB15Q9Y5E8 787 aa9.16□□□□□ -0.94
PRKCA-205ENST00000583775 KIAA0586Q9BVV6 1533 aa9.15□□□□□ -0.94
PRKCA-205ENST00000583775 LRRIQ1Q96JM4 1722 aa9.15□□□□□ -0.94
PRKCA-205ENST00000583775 CFAP99D6REC4 459 aa9.15□□□□□ -0.94
PRKCA-205ENST00000583775 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.94
PRKCA-205ENST00000583775 FBXO31Q5XUX0 539 aaPredicted RBP9.15□□□□□ -0.94
PRKCA-205ENST00000583775 MEIOBQ8N635 442 aa9.15□□□□□ -0.94
PRKCA-205ENST00000583775 GPR161Q8N6U8 529 aaKnown RBP9.15□□□□□ -0.94
PRKCA-205ENST00000583775 PCMTD1Q96MG8 357 aaPredicted RBP9.15□□□□□ -0.94
PRKCA-205ENST00000583775 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
PRKCA-205ENST00000583775 DNMT3LQ9UJW3 386 aa9.14□□□□□ -0.95
PRKCA-205ENST00000583775 GRIN2AQ12879 1464 aa9.14□□□□□ -0.95
PRKCA-205ENST00000583775 SH3D19Q5HYK7 790 aa9.13□□□□□ -0.95
PRKCA-205ENST00000583775 C6orf118Q5T5N4 469 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms